RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 MCCP23508 829 aa19.63■□□□□ 0.73
HLA-DQB2-231ENST00000435145 CUL4AQ13619 759 aa19.63■□□□□ 0.73
HLA-DQB2-231ENST00000435145 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
HLA-DQB2-231ENST00000435145 TRIM6-TRIM34B2RNG4 842 aa19.62■□□□□ 0.73
HLA-DQB2-231ENST00000435145 NBPF7P0C2Y1 421 aaPredicted RBP19.62■□□□□ 0.73
HLA-DQB2-231ENST00000435145 RHPN1Q8TCX5 695 aa19.62■□□□□ 0.73
HLA-DQB2-231ENST00000435145 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
HLA-DQB2-231ENST00000435145 PI4KAP2A4QPH2 592 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 BTBD11A6QL63 1104 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 RNMTO43148 476 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 GCP02774 474 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 NEK4P51957 841 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 TEFQ10587 303 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 PI4KAP1Q8N8J0 262 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 PI4K2BQ8TCG2 481 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 RILPL2Q969X0 211 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 KIF1BPQ96EK5 621 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 TMX3Q96JJ7 454 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 IL1RAPL2Q9NP60 686 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 AK9Q5TCS8 1911 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 ADAMTSL3P82987 1691 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 ADAMTS7Q9UKP4 1686 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 TRPM3Q9HCF6 1732 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 SURF6O75683 361 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 MTX1Q13505 466 aa19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB2-231ENST00000435145 DDX49Q9Y6V7 483 aaKnown RBP19.6■□□□□ 0.73
HLA-DQB2-231ENST00000435145 MST1RQ04912 1400 aa19.6■□□□□ 0.73
HLA-DQB2-231ENST00000435145 SRGAP3O43295 1099 aa19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 ANO2Q9NQ90 1003 aa19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 SIPA1L3O60292 1781 aaPredicted RBP19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 MCTP1Q6DN14 999 aa19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 MPRIPQ6WCQ1 1025 aa19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 NUTM1Q86Y26 1132 aa19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 DBF4Q9UBU7 674 aaPredicted RBP19.59■□□□□ 0.73
HLA-DQB2-231ENST00000435145 ORAI2Q96SN7 254 aa19.58■□□□□ 0.73
HLA-DQB2-231ENST00000435145 ZNF445P59923 1031 aa19.58■□□□□ 0.72
HLA-DQB2-231ENST00000435145 HSP90AB4PQ58FF6 505 aa19.58■□□□□ 0.72
HLA-DQB2-231ENST00000435145 INTS4Q96HW7 963 aaKnown RBP19.58■□□□□ 0.72
HLA-DQB2-231ENST00000435145 IL25Q9H293 177 aa19.58■□□□□ 0.72
HLA-DQB2-231ENST00000435145 GIGYF1O75420 1035 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB2-231ENST00000435145 ALDH1L1O75891 902 aa19.57■□□□□ 0.72
HLA-DQB2-231ENST00000435145 HSPA4P34932 840 aa19.57■□□□□ 0.72
HLA-DQB2-231ENST00000435145 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
HLA-DQB2-231ENST00000435145 SETD1BQ9UPS6 1966 aaKnown RBP19.57■□□□□ 0.72
HLA-DQB2-231ENST00000435145 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
HLA-DQB2-231ENST00000435145 ZBTB7CA1YPR0 619 aa19.55■□□□□ 0.72
HLA-DQB2-231ENST00000435145 SGSM2O43147 1006 aa19.55■□□□□ 0.72
HLA-DQB2-231ENST00000435145 ANXA1P04083 346 aa19.55■□□□□ 0.72
HLA-DQB2-231ENST00000435145 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
HLA-DQB2-231ENST00000435145 TTC41PQ6P2S7 1318 aa19.54■□□□□ 0.72
HLA-DQB2-231ENST00000435145 RAD50Q92878 1312 aa19.54■□□□□ 0.72
HLA-DQB2-231ENST00000435145 BRD1O95696 1058 aa19.54■□□□□ 0.72
HLA-DQB2-231ENST00000435145 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
HLA-DQB2-231ENST00000435145 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 PROSER3Q2NL68 480 aa19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 MAP3K2Q9Y2U5 619 aa19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 CLCN1P35523 988 aa19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 XPCQ01831 940 aaPredicted RBP19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 CNTROBQ8N137 903 aa19.52■□□□□ 0.72
HLA-DQB2-231ENST00000435145 UTYO14607 1347 aa19.52■□□□□ 0.71
HLA-DQB2-231ENST00000435145 LSG1Q9H089 658 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB2-231ENST00000435145 HDAC5Q9UQL6 1122 aa19.51■□□□□ 0.71
HLA-DQB2-231ENST00000435145 C1orf167Q5SNV9 1468 aa19.51■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ZSCAN23Q3MJ62 389 aa19.51■□□□□ 0.71
HLA-DQB2-231ENST00000435145 GPT2Q8TD30 523 aa19.51■□□□□ 0.71
HLA-DQB2-231ENST00000435145 HYPKQ9NX55 129 aa19.51■□□□□ 0.71
HLA-DQB2-231ENST00000435145 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB2-231ENST00000435145 GLRX3O76003 335 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB2-231ENST00000435145 PPP1R9BQ96SB3 815 aa19.5■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
HLA-DQB2-231ENST00000435145 CAVIN1Q6NZI2 390 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB2-231ENST00000435145 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
HLA-DQB2-231ENST00000435145 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ERBB3P21860 1342 aa19.49■□□□□ 0.71
HLA-DQB2-231ENST00000435145 MAP4K4O95819 1239 aaPredicted RBP19.49■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ABCC6O95255 1503 aa19.48■□□□□ 0.71
HLA-DQB2-231ENST00000435145 NASPP49321 788 aaPredicted RBP19.48■□□□□ 0.71
HLA-DQB2-231ENST00000435145 LINS1Q8NG48 757 aa19.48■□□□□ 0.71
HLA-DQB2-231ENST00000435145 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
HLA-DQB2-231ENST00000435145 SNX14Q9Y5W7 946 aa19.48■□□□□ 0.71
HLA-DQB2-231ENST00000435145 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 PDIA6Q15084 440 aa19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ERC1Q8IUD2 1116 aa19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 TTC14Q96N46 770 aa19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ECHDC1Q9NTX5 307 aa19.46■□□□□ 0.71
HLA-DQB2-231ENST00000435145 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
HLA-DQB2-231ENST00000435145 ESPNB1AK53 854 aa19.46■□□□□ 0.71
HLA-DQB2-231ENST00000435145 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB2-231ENST00000435145 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
HLA-DQB2-231ENST00000435145 CHAMP1Q96JM3 812 aa19.46■□□□□ 0.71
HLA-DQB2-231ENST00000435145 KDM6AO15550 1401 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms