RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 BTAF1O14981 1849 aa13.27□□□□□ -0.28
LINC01055-201ENST00000435067 TRIM37O94972 964 aa13.27□□□□□ -0.29
LINC01055-201ENST00000435067 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
LINC01055-201ENST00000435067 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
LINC01055-201ENST00000435067 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
LINC01055-201ENST00000435067 TRIM27P14373 513 aa13.26□□□□□ -0.29
LINC01055-201ENST00000435067 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
LINC01055-201ENST00000435067 PROSER3Q2NL68 480 aa13.26□□□□□ -0.29
LINC01055-201ENST00000435067 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
LINC01055-201ENST00000435067 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
LINC01055-201ENST00000435067 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
LINC01055-201ENST00000435067 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
LINC01055-201ENST00000435067 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
LINC01055-201ENST00000435067 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 MYL6BP14649 208 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 SIK1P57059 783 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 PDIA6Q15084 440 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 LAMB4A4D0S4 1761 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 FLIIQ13045 1269 aa13.25□□□□□ -0.29
LINC01055-201ENST00000435067 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
LINC01055-201ENST00000435067 A1BGP04217 495 aa13.24□□□□□ -0.29
LINC01055-201ENST00000435067 RLBP1P12271 317 aa13.24□□□□□ -0.29
LINC01055-201ENST00000435067 FTSJ3Q8IY81 847 aaKnown RBP13.24□□□□□ -0.29
LINC01055-201ENST00000435067 ARHGAP45Q92619 1136 aa13.24□□□□□ -0.29
LINC01055-201ENST00000435067 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01055-201ENST00000435067 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
LINC01055-201ENST00000435067 STARD3NLO95772 234 aa13.23□□□□□ -0.29
LINC01055-201ENST00000435067 KCNQ4P56696 695 aa13.23□□□□□ -0.29
LINC01055-201ENST00000435067 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
LINC01055-201ENST00000435067 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
LINC01055-201ENST00000435067 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
LINC01055-201ENST00000435067 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
LINC01055-201ENST00000435067 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 CYP19A1P11511 503 aaPredicted RBP13.22□□□□□ -0.29
LINC01055-201ENST00000435067 ITPK1Q13572 414 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
LINC01055-201ENST00000435067 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 PTPRCP08575 1304 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 TJP1Q07157 1748 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
LINC01055-201ENST00000435067 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 API5Q9BZZ5 524 aaKnown RBP13.22□□□□□ -0.29
LINC01055-201ENST00000435067 COG6Q9Y2V7 657 aa13.22□□□□□ -0.29
LINC01055-201ENST00000435067 F6X3S4 739 aa13.21□□□□□ -0.3
LINC01055-201ENST00000435067 MS4A1P11836 297 aa13.21□□□□□ -0.3
LINC01055-201ENST00000435067 LRP10Q7Z4F1 713 aa13.2□□□□□ -0.3
LINC01055-201ENST00000435067 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
LINC01055-201ENST00000435067 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
LINC01055-201ENST00000435067 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
LINC01055-201ENST00000435067 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
LINC01055-201ENST00000435067 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
LINC01055-201ENST00000435067 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 LY75O60449 1722 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 ABCC4O15439 1325 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 APBA3O96018 575 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
LINC01055-201ENST00000435067 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
LINC01055-201ENST00000435067 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
LINC01055-201ENST00000435067 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
LINC01055-201ENST00000435067 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
LINC01055-201ENST00000435067 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
LINC01055-201ENST00000435067 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
LINC01055-201ENST00000435067 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
LINC01055-201ENST00000435067 ADCY9O60503 1353 aa13.17□□□□□ -0.3
LINC01055-201ENST00000435067 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
LINC01055-201ENST00000435067 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 MAP3K2Q9Y2U5 619 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
LINC01055-201ENST00000435067 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 ARXQ96QS3 562 aa13.16□□□□□ -0.3
LINC01055-201ENST00000435067 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
LINC01055-201ENST00000435067 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
LINC01055-201ENST00000435067 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
LINC01055-201ENST00000435067 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
LINC01055-201ENST00000435067 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
LINC01055-201ENST00000435067 PLSCR1O15162 318 aa13.14□□□□□ -0.31
LINC01055-201ENST00000435067 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
LINC01055-201ENST00000435067 TXNRD1Q16881 649 aa13.14□□□□□ -0.31
LINC01055-201ENST00000435067 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
LINC01055-201ENST00000435067 PROM2Q8N271 834 aa13.14□□□□□ -0.31
LINC01055-201ENST00000435067 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
LINC01055-201ENST00000435067 TAF1LQ8IZX4 1826 aa13.14□□□□□ -0.31
LINC01055-201ENST00000435067 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
LINC01055-201ENST00000435067 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
LINC01055-201ENST00000435067 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
LINC01055-201ENST00000435067 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
LINC01055-201ENST00000435067 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
LINC01055-201ENST00000435067 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms