RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 PTPRCP08575 1304 aa14.49□□□□□ -0.09
PCOTH-203ENST00000435039 GIGYF1O75420 1035 aaPredicted RBP14.49□□□□□ -0.09
PCOTH-203ENST00000435039 ATF7IPQ6VMQ6 1270 aa14.49□□□□□ -0.09
PCOTH-203ENST00000435039 ARHGAP45Q92619 1136 aa14.49□□□□□ -0.09
PCOTH-203ENST00000435039 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
PCOTH-203ENST00000435039 TJP1Q07157 1748 aa14.49□□□□□ -0.09
PCOTH-203ENST00000435039 SLC39A6Q13433 755 aa14.48□□□□□ -0.09
PCOTH-203ENST00000435039 TRIM27P14373 513 aa14.47□□□□□ -0.09
PCOTH-203ENST00000435039 C20orf194Q5TEA3 1177 aa14.47□□□□□ -0.09
PCOTH-203ENST00000435039 FTSJ3Q8IY81 847 aaKnown RBP14.47□□□□□ -0.09
PCOTH-203ENST00000435039 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
PCOTH-203ENST00000435039 NOB1Q9ULX3 412 aaKnown RBP14.47□□□□□ -0.09
PCOTH-203ENST00000435039 ABCC4O15439 1325 aa14.46□□□□□ -0.09
PCOTH-203ENST00000435039 BTAF1O14981 1849 aa14.46□□□□□ -0.09
PCOTH-203ENST00000435039 DZIP1LQ8IYY4 767 aaKnown RBP14.46□□□□□ -0.09
PCOTH-203ENST00000435039 PIGBQ92521 554 aa14.46□□□□□ -0.09
PCOTH-203ENST00000435039 CRBNQ96SW2 442 aa14.46□□□□□ -0.09
PCOTH-203ENST00000435039 API5Q9BZZ5 524 aaKnown RBP14.46□□□□□ -0.09
PCOTH-203ENST00000435039 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
PCOTH-203ENST00000435039 SNRPA1P09661 255 aaKnown RBP14.45□□□□□ -0.1
PCOTH-203ENST00000435039 NBPF14Q5TI25 921 aa14.44□□□□□ -0.1
PCOTH-203ENST00000435039 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
PCOTH-203ENST00000435039 EXOC6Q8TAG9 804 aa14.44□□□□□ -0.1
PCOTH-203ENST00000435039 COL5A3P25940 1745 aaPredicted RBP14.44□□□□□ -0.1
PCOTH-203ENST00000435039 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
PCOTH-203ENST00000435039 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 RLBP1P12271 317 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 AAMPQ13685 434 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 MVPQ14764 893 aaKnown RBP14.43□□□□□ -0.1
PCOTH-203ENST00000435039 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 PPP4R2Q9NY27 417 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 CHPF2Q9P2E5 772 aa14.43□□□□□ -0.1
PCOTH-203ENST00000435039 DBF4Q9UBU7 674 aaPredicted RBP14.43□□□□□ -0.1
PCOTH-203ENST00000435039 KAT6BQ8WYB5 2073 aa14.42□□□□□ -0.1
PCOTH-203ENST00000435039 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
PCOTH-203ENST00000435039 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
PCOTH-203ENST00000435039 FLIIQ13045 1269 aa14.42□□□□□ -0.1
PCOTH-203ENST00000435039 SYTL4Q96C24 671 aaPredicted RBP14.42□□□□□ -0.1
PCOTH-203ENST00000435039 TNNQ9UQP3 1299 aa14.42□□□□□ -0.1
PCOTH-203ENST00000435039 LY75O60449 1722 aa14.41□□□□□ -0.1
PCOTH-203ENST00000435039 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
PCOTH-203ENST00000435039 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
PCOTH-203ENST00000435039 CLUAP1Q96AJ1 413 aa14.41□□□□□ -0.1
PCOTH-203ENST00000435039 DDX21Q9NR30 783 aaKnown RBP eCLIP14.41□□□□□ -0.1
PCOTH-203ENST00000435039 ASAP1Q9ULH1 1129 aa14.41□□□□□ -0.1
PCOTH-203ENST00000435039 CASZ1Q86V15 1759 aa14.41□□□□□ -0.1
PCOTH-203ENST00000435039 ARFGEF2Q9Y6D5 1785 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 PALLDQ8WX93 1383 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 PLSCR1O15162 318 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 PTF1AQ7RTS3 328 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 ACSBG1Q96GR2 724 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 TEX13AQ9BXU3 409 aaPredicted RBP14.4□□□□□ -0.1
PCOTH-203ENST00000435039 HYPKQ9NX55 129 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 DDX19BQ9UMR2 479 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 ATP10DQ9P241 1426 aa14.4□□□□□ -0.1
PCOTH-203ENST00000435039 G2E3Q7L622 706 aa14.39□□□□□ -0.11
PCOTH-203ENST00000435039 ITPRIPQ8IWB1 547 aa14.39□□□□□ -0.11
PCOTH-203ENST00000435039 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
PCOTH-203ENST00000435039 SMARCC1Q92922 1105 aaPredicted RBP14.39□□□□□ -0.11
PCOTH-203ENST00000435039 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
PCOTH-203ENST00000435039 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
PCOTH-203ENST00000435039 FKBP5Q13451 457 aaPredicted RBP14.38□□□□□ -0.11
PCOTH-203ENST00000435039 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
PCOTH-203ENST00000435039 SPON1Q9HCB6 807 aa14.38□□□□□ -0.11
PCOTH-203ENST00000435039 KCNQ2O43526 872 aa14.37□□□□□ -0.11
PCOTH-203ENST00000435039 PDIA6Q15084 440 aa14.37□□□□□ -0.11
PCOTH-203ENST00000435039 INTS3Q68E01 1043 aaKnown RBP14.37□□□□□ -0.11
PCOTH-203ENST00000435039 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
PCOTH-203ENST00000435039 USP16Q9Y5T5 823 aa14.37□□□□□ -0.11
PCOTH-203ENST00000435039 ADCY9O60503 1353 aa14.36□□□□□ -0.11
PCOTH-203ENST00000435039 IBTKQ9P2D0 1353 aaPredicted RBP14.36□□□□□ -0.11
PCOTH-203ENST00000435039 CCT4P50991 539 aaKnown RBP14.36□□□□□ -0.11
PCOTH-203ENST00000435039 PROSER3Q2NL68 480 aa14.36□□□□□ -0.11
PCOTH-203ENST00000435039 LRP10Q7Z4F1 713 aa14.36□□□□□ -0.11
PCOTH-203ENST00000435039 PHAXQ9H814 394 aaKnown RBP14.36□□□□□ -0.11
PCOTH-203ENST00000435039 STARD3NLO95772 234 aa14.35□□□□□ -0.11
PCOTH-203ENST00000435039 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
PCOTH-203ENST00000435039 PROM2Q8N271 834 aa14.35□□□□□ -0.11
PCOTH-203ENST00000435039 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
PCOTH-203ENST00000435039 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
PCOTH-203ENST00000435039 ANXA1P04083 346 aa14.34□□□□□ -0.11
PCOTH-203ENST00000435039 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
PCOTH-203ENST00000435039 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
PCOTH-203ENST00000435039 SLC4A9Q96Q91 983 aa14.34□□□□□ -0.11
PCOTH-203ENST00000435039 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
PCOTH-203ENST00000435039 ANKRD36CQ5JPF3 1778 aa14.33□□□□□ -0.12
PCOTH-203ENST00000435039 LOC102724428A0A0B4J2F2 783 aa14.33□□□□□ -0.12
PCOTH-203ENST00000435039 SIK1P57059 783 aa14.33□□□□□ -0.12
PCOTH-203ENST00000435039 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.12
PCOTH-203ENST00000435039 PDGFDQ9GZP0 370 aaPredicted RBP14.33□□□□□ -0.12
PCOTH-203ENST00000435039 AFDNP55196 1824 aaKnown RBP14.33□□□□□ -0.12
PCOTH-203ENST00000435039 BCORQ6W2J9 1755 aa14.32□□□□□ -0.12
PCOTH-203ENST00000435039 F6X3S4 739 aa14.32□□□□□ -0.12
PCOTH-203ENST00000435039 CYP19A1P11511 503 aaPredicted RBP14.32□□□□□ -0.12
PCOTH-203ENST00000435039 MYL6BP14649 208 aa14.32□□□□□ -0.12
PCOTH-203ENST00000435039 SCN7AQ01118 1682 aa14.31□□□□□ -0.12
PCOTH-203ENST00000435039 PI4KAP2A4QPH2 592 aa14.31□□□□□ -0.12
PCOTH-203ENST00000435039 NBPF26B4DH59 902 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms