RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 GPS2Q13227 327 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 SNRKQ9NRH2 765 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 ATP10AO60312 1499 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 VAT1LQ9HCJ6 419 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 CCDC73Q6ZRK6 1079 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 TRAPPC8Q9Y2L5 1435 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 SETQ01105 290 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-203ENST00000434735 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 NIM1KQ8IY84 436 aa14.38□□□□□ -0.11
UBE3B-203ENST00000434735 ABCC2Q92887 1545 aa14.37□□□□□ -0.11
UBE3B-203ENST00000434735 ABCC10Q5T3U5 1492 aa14.37□□□□□ -0.11
UBE3B-203ENST00000434735 GSTO1P78417 241 aa14.37□□□□□ -0.11
UBE3B-203ENST00000434735 CERKQ8TCT0 537 aa14.37□□□□□ -0.11
UBE3B-203ENST00000434735 BOLA2Q9H3K6 86 aa14.37□□□□□ -0.11
UBE3B-203ENST00000434735 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
UBE3B-203ENST00000434735 NEBLO76041 1014 aa14.36□□□□□ -0.11
UBE3B-203ENST00000434735 IMMTQ16891 758 aaKnown RBP14.36□□□□□ -0.11
UBE3B-203ENST00000434735 CCDC8Q9H0W5 538 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-203ENST00000434735 XAGE3Q8WTP9 111 aa14.36□□□□□ -0.11
UBE3B-203ENST00000434735 CDC45O75419 566 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 NOD1Q9Y239 953 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 DEKP35659 375 aaKnown RBP14.35□□□□□ -0.11
UBE3B-203ENST00000434735 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 CEBPZQ03701 1054 aaKnown RBP14.35□□□□□ -0.11
UBE3B-203ENST00000434735 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
UBE3B-203ENST00000434735 FAM196AQ6ZSG2 479 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 ABT1Q9ULW3 272 aaKnown RBP14.35□□□□□ -0.11
UBE3B-203ENST00000434735 H7C1D1 291 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 EXOC6BQ9Y2D4 811 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 SAMM50Q9Y512 469 aa14.35□□□□□ -0.11
UBE3B-203ENST00000434735 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
UBE3B-203ENST00000434735 DPP8Q6V1X1 898 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-203ENST00000434735 CCDC82Q8N4S0 544 aa14.34□□□□□ -0.11
UBE3B-203ENST00000434735 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
UBE3B-203ENST00000434735 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
UBE3B-203ENST00000434735 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
UBE3B-203ENST00000434735 UFL1O94874 794 aa14.34□□□□□ -0.11
UBE3B-203ENST00000434735 KIF22Q14807 665 aa14.34□□□□□ -0.11
UBE3B-203ENST00000434735 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
UBE3B-203ENST00000434735 IQCA1Q86XH1 822 aa14.33□□□□□ -0.11
UBE3B-203ENST00000434735 PATL2C9JE40 543 aaKnown RBP14.33□□□□□ -0.12
UBE3B-203ENST00000434735 PSDA5PKW4 1024 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-203ENST00000434735 NOL7Q9UMY1 257 aaKnown RBP14.33□□□□□ -0.12
UBE3B-203ENST00000434735 FLAD1Q8NFF5 587 aa14.33□□□□□ -0.12
UBE3B-203ENST00000434735 NCOA1Q15788 1441 aa14.33□□□□□ -0.12
UBE3B-203ENST00000434735 TSPY2A6NKD2 308 aa14.33□□□□□ -0.12
UBE3B-203ENST00000434735 RDXP35241 583 aaKnown RBP14.33□□□□□ -0.12
UBE3B-203ENST00000434735 CKAP2LQ8IYA6 745 aa14.33□□□□□ -0.12
UBE3B-203ENST00000434735 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 AKAP4Q5JQC9 854 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 CTCFLQ8NI51 663 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-203ENST00000434735 SYCP2Q9BX26 1530 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 C11orf95C9JLR9 678 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-203ENST00000434735 PPIP5K2O43314 1243 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 DCAF5Q96JK2 942 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 MYCP01106 439 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-203ENST00000434735 MVPQ14764 893 aaKnown RBP14.32□□□□□ -0.12
UBE3B-203ENST00000434735 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 PCF11O94913 1555 aaKnown RBP14.32□□□□□ -0.12
UBE3B-203ENST00000434735 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 IVNS1ABPQ9Y6Y0 642 aa14.32□□□□□ -0.12
UBE3B-203ENST00000434735 TIAM1Q13009 1591 aa14.31□□□□□ -0.12
UBE3B-203ENST00000434735 CDR1P51861 262 aa14.31□□□□□ -0.12
UBE3B-203ENST00000434735 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
UBE3B-203ENST00000434735 HELBQ8NG08 1087 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-203ENST00000434735 SEPT12Q8IYM1 358 aa14.31□□□□□ -0.12
UBE3B-203ENST00000434735 STX8Q9UNK0 236 aa14.31□□□□□ -0.12
UBE3B-203ENST00000434735 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
UBE3B-203ENST00000434735 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
UBE3B-203ENST00000434735 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
UBE3B-203ENST00000434735 IRS4O14654 1257 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-203ENST00000434735 PDE4BQ07343 736 aa14.3□□□□□ -0.12
UBE3B-203ENST00000434735 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-203ENST00000434735 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
UBE3B-203ENST00000434735 WDR63Q8IWG1 891 aa14.3□□□□□ -0.12
UBE3B-203ENST00000434735 BRD4O60885 1362 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-203ENST00000434735 STK38Q15208 465 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 IFT57Q9NWB7 429 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 C2CD5Q86YS7 1000 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 PDE6BP35913 854 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 TMOD4Q9NZQ9 345 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 CHPF2Q9P2E5 772 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 FLIIQ13045 1269 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 SMCR8Q8TEV9 937 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-203ENST00000434735 CYP46A1Q9Y6A2 500 aa14.29□□□□□ -0.12
UBE3B-203ENST00000434735 CCDC173Q0VFZ6 552 aa14.28□□□□□ -0.12
UBE3B-203ENST00000434735 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
UBE3B-203ENST00000434735 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
UBE3B-203ENST00000434735 MAGEC2Q9UBF1 373 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-203ENST00000434735 ZBED9Q6R2W3 1325 aa14.28□□□□□ -0.12
UBE3B-203ENST00000434735 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
UBE3B-203ENST00000434735 CCDC97Q96F63 343 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-203ENST00000434735 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
UBE3B-203ENST00000434735 HOMER1Q86YM7 354 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms