RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 RAB3GAP1Q15042 981 aa20.9■□□□□ 0.94
CTSD-204ENST00000433655 DBF4Q9UBU7 674 aaPredicted RBP20.9■□□□□ 0.94
CTSD-204ENST00000433655 REC8O95072 547 aa20.9■□□□□ 0.94
CTSD-204ENST00000433655 MEGF6O75095 1541 aa20.89■□□□□ 0.94
CTSD-204ENST00000433655 TNPO1Q92973 898 aaKnown RBP20.89■□□□□ 0.93
CTSD-204ENST00000433655 FOXD4L1Q9NU39 408 aa20.89■□□□□ 0.93
CTSD-204ENST00000433655 ATF3P18847 181 aa20.88■□□□□ 0.93
CTSD-204ENST00000433655 AOX1Q06278 1338 aa20.88■□□□□ 0.93
CTSD-204ENST00000433655 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
CTSD-204ENST00000433655 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
CTSD-204ENST00000433655 IL1RAPL2Q9NP60 686 aa20.87■□□□□ 0.93
CTSD-204ENST00000433655 RAB11FIP3O75154 756 aa20.87■□□□□ 0.93
CTSD-204ENST00000433655 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
CTSD-204ENST00000433655 ESYT1Q9BSJ8 1104 aa20.87■□□□□ 0.93
CTSD-204ENST00000433655 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
CTSD-204ENST00000433655 TNS3Q68CZ2 1445 aa20.86■□□□□ 0.93
CTSD-204ENST00000433655 SRGAP3O43295 1099 aa20.86■□□□□ 0.93
CTSD-204ENST00000433655 SURF6O75683 361 aaKnown RBP20.86■□□□□ 0.93
CTSD-204ENST00000433655 IL27Q8NEV9 243 aa20.85■□□□□ 0.93
CTSD-204ENST00000433655 BRPF3Q9ULD4 1205 aa20.85■□□□□ 0.93
CTSD-204ENST00000433655 MAP3K2Q9Y2U5 619 aa20.85■□□□□ 0.93
CTSD-204ENST00000433655 CHMLP26374 656 aa20.85■□□□□ 0.93
CTSD-204ENST00000433655 RHPN1Q8TCX5 695 aa20.85■□□□□ 0.93
CTSD-204ENST00000433655 NPHP3Q7Z494 1330 aa20.84■□□□□ 0.93
CTSD-204ENST00000433655 HSP90AA1P07900 732 aaKnown RBP20.84■□□□□ 0.93
CTSD-204ENST00000433655 KSR2Q6VAB6 950 aa20.84■□□□□ 0.93
CTSD-204ENST00000433655 NUTM1Q86Y26 1132 aa20.84■□□□□ 0.93
CTSD-204ENST00000433655 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.93
CTSD-204ENST00000433655 TRAK2O60296 914 aa20.83■□□□□ 0.93
CTSD-204ENST00000433655 MTX1Q13505 466 aa20.83■□□□□ 0.93
CTSD-204ENST00000433655 CABLES1Q8TDN4 633 aa20.83■□□□□ 0.93
CTSD-204ENST00000433655 NLRP2Q9NX02 1062 aa20.83■□□□□ 0.93
CTSD-204ENST00000433655 MRC1P22897 1456 aa20.83■□□□□ 0.93
CTSD-204ENST00000433655 ALDH1L1O75891 902 aa20.83■□□□□ 0.92
CTSD-204ENST00000433655 PHKG2P15735 406 aa20.83■□□□□ 0.92
CTSD-204ENST00000433655 PDIA6Q15084 440 aa20.83■□□□□ 0.92
CTSD-204ENST00000433655 PI4K2BQ8TCG2 481 aa20.83■□□□□ 0.92
CTSD-204ENST00000433655 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.92
CTSD-204ENST00000433655 TRIM6-TRIM34B2RNG4 842 aa20.82■□□□□ 0.92
CTSD-204ENST00000433655 RILPL2Q969X0 211 aa20.82■□□□□ 0.92
CTSD-204ENST00000433655 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
CTSD-204ENST00000433655 SLC52A2Q9HAB3 445 aa20.82■□□□□ 0.92
CTSD-204ENST00000433655 SLC39A6Q13433 755 aa20.81■□□□□ 0.92
CTSD-204ENST00000433655 HYPKQ9NX55 129 aa20.81■□□□□ 0.92
CTSD-204ENST00000433655 TATP17735 454 aaPredicted RBP20.8■□□□□ 0.92
CTSD-204ENST00000433655 SSFA2P28290 1259 aa20.8■□□□□ 0.92
CTSD-204ENST00000433655 CWF19L2Q2TBE0 894 aaKnown RBP20.8■□□□□ 0.92
CTSD-204ENST00000433655 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
CTSD-204ENST00000433655 IL25Q9H293 177 aa20.8■□□□□ 0.92
CTSD-204ENST00000433655 DDX21Q9NR30 783 aaKnown RBP eCLIP20.8■□□□□ 0.92
CTSD-204ENST00000433655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
CTSD-204ENST00000433655 GLI3P10071 1580 aa20.8■□□□□ 0.92
CTSD-204ENST00000433655 PLEKHG2Q9H7P9 1386 aa20.79■□□□□ 0.92
CTSD-204ENST00000433655 CADPS2Q86UW7 1296 aa20.79■□□□□ 0.92
CTSD-204ENST00000433655 PALD1Q9ULE6 856 aa20.79■□□□□ 0.92
CTSD-204ENST00000433655 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
CTSD-204ENST00000433655 ST18O60284 1047 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 CHRNA2Q15822 529 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 UTYO14607 1347 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 PARP4Q9UKK3 1724 aaKnown RBP20.78■□□□□ 0.92
CTSD-204ENST00000433655 CLEC17AQ6ZS10 378 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 IL17RAQ96F46 866 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 SPG7Q9UQ90 795 aa20.78■□□□□ 0.92
CTSD-204ENST00000433655 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
CTSD-204ENST00000433655 CPDO75976 1380 aa20.77■□□□□ 0.92
CTSD-204ENST00000433655 FSD2A1L4K1 749 aa20.77■□□□□ 0.92
CTSD-204ENST00000433655 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
CTSD-204ENST00000433655 KAZALD1Q96I82 304 aa20.77■□□□□ 0.92
CTSD-204ENST00000433655 CYP2E1P05181 493 aaPredicted RBP20.77■□□□□ 0.91
CTSD-204ENST00000433655 LINS1Q8NG48 757 aa20.77■□□□□ 0.91
CTSD-204ENST00000433655 GZF1Q9H116 711 aaPredicted RBP20.77■□□□□ 0.91
CTSD-204ENST00000433655 C9orf78Q9NZ63 289 aaPredicted RBP20.77■□□□□ 0.91
CTSD-204ENST00000433655 CYP27B1O15528 508 aa20.76■□□□□ 0.91
CTSD-204ENST00000433655 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
CTSD-204ENST00000433655 MAP4K4O95819 1239 aaPredicted RBP20.75■□□□□ 0.91
CTSD-204ENST00000433655 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
CTSD-204ENST00000433655 ANO2Q9NQ90 1003 aa20.75■□□□□ 0.91
CTSD-204ENST00000433655 CSB-PGBD3P0DP91 1061 aa20.75■□□□□ 0.91
CTSD-204ENST00000433655 HSPA2P54652 639 aa20.75■□□□□ 0.91
CTSD-204ENST00000433655 SUCLG2Q96I99 432 aa20.75■□□□□ 0.91
CTSD-204ENST00000433655 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
CTSD-204ENST00000433655 GRM8O00222 908 aa20.74■□□□□ 0.91
CTSD-204ENST00000433655 IGKV5-2P06315 115 aa20.74■□□□□ 0.91
CTSD-204ENST00000433655 AIMP1Q12904 312 aaKnown RBP20.74■□□□□ 0.91
CTSD-204ENST00000433655 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
CTSD-204ENST00000433655 ZNF496Q96IT1 587 aaPredicted RBP20.74■□□□□ 0.91
CTSD-204ENST00000433655 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
CTSD-204ENST00000433655 ANAPC15P60006 121 aa20.73■□□□□ 0.91
CTSD-204ENST00000433655 LRP10Q7Z4F1 713 aa20.73■□□□□ 0.91
CTSD-204ENST00000433655 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
CTSD-204ENST00000433655 PKP1Q13835 747 aa20.73■□□□□ 0.91
CTSD-204ENST00000433655 NEK4P51957 841 aa20.72■□□□□ 0.91
CTSD-204ENST00000433655 L1TD1Q5T7N2 865 aaKnown RBP20.71■□□□□ 0.91
CTSD-204ENST00000433655 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
CTSD-204ENST00000433655 TTC41PQ6P2S7 1318 aa20.71■□□□□ 0.91
CTSD-204ENST00000433655 ARFGEF2Q9Y6D5 1785 aa20.71■□□□□ 0.91
CTSD-204ENST00000433655 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
CTSD-204ENST00000433655 EPB41L2O43491 1005 aaKnown RBP20.71■□□□□ 0.91
CTSD-204ENST00000433655 BAG4O95429 457 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms