RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 TRIM22Q8IYM9 498 aa6.73□□□□□ -1.33
LINC01239-201ENST00000433645 TSEN2Q8NCE0 465 aaKnown RBP6.73□□□□□ -1.33
LINC01239-201ENST00000433645 IRF7Q92985 503 aa6.73□□□□□ -1.33
LINC01239-201ENST00000433645 ZMIZ1Q9ULJ6 1067 aa6.73□□□□□ -1.33
LINC01239-201ENST00000433645 CHMP3Q9Y3E7 222 aa6.73□□□□□ -1.33
LINC01239-201ENST00000433645 WFS1O76024 890 aa6.72□□□□□ -1.33
LINC01239-201ENST00000433645 NOS2P35228 1153 aa6.72□□□□□ -1.33
LINC01239-201ENST00000433645 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
LINC01239-201ENST00000433645 CDCA8Q53HL2 280 aa6.72□□□□□ -1.33
LINC01239-201ENST00000433645 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
LINC01239-201ENST00000433645 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
LINC01239-201ENST00000433645 CABP1Q9NZU7 370 aa6.72□□□□□ -1.33
LINC01239-201ENST00000433645 ATAD2Q6PL18 1390 aa6.71□□□□□ -1.33
LINC01239-201ENST00000433645 SERTM1A2A2V5 107 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 WEE1P30291 646 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 PLA2G4AP47712 749 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 FAM69CQ0P6D2 419 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 C1orf53Q5VUE5 145 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 L3MBTL2Q969R5 705 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 HINFPQ9BQA5 517 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
LINC01239-201ENST00000433645 USP3Q9Y6I4 520 aa6.71□□□□□ -1.34
LINC01239-201ENST00000433645 EML1O00423 815 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 FOXO3O43524 673 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 C21orf2O43822 256 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 CSB-PGBD3P0DP91 1061 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 TATP17735 454 aaPredicted RBP6.7□□□□□ -1.34
LINC01239-201ENST00000433645 MSX1P28360 303 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 SV2AQ7L0J3 742 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 NLRP8Q86W28 1048 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 PGBD3Q8N328 593 aa6.7□□□□□ -1.34
LINC01239-201ENST00000433645 C2orf49Q9BVC5 232 aaPredicted RBP6.7□□□□□ -1.34
LINC01239-201ENST00000433645 ATP4AP20648 1035 aa6.69□□□□□ -1.34
LINC01239-201ENST00000433645 PHKA2P46019 1235 aa6.69□□□□□ -1.34
LINC01239-201ENST00000433645 TMEM164Q5U3C3 297 aa6.69□□□□□ -1.34
LINC01239-201ENST00000433645 ZDHHC1Q8WTX9 485 aa6.69□□□□□ -1.34
LINC01239-201ENST00000433645 STK32AQ8WU08 396 aa6.69□□□□□ -1.34
LINC01239-201ENST00000433645 SCG3Q8WXD2 468 aaKnown RBP6.69□□□□□ -1.34
LINC01239-201ENST00000433645 CLP1Q92989 425 aaKnown RBP6.69□□□□□ -1.34
LINC01239-201ENST00000433645 PPP1R12BO60237 982 aaPredicted RBP6.68□□□□□ -1.34
LINC01239-201ENST00000433645 PDE4CQ08493 712 aa6.68□□□□□ -1.34
LINC01239-201ENST00000433645 DBN1Q16643 649 aa6.68□□□□□ -1.34
LINC01239-201ENST00000433645 EFHC2Q5JST6 749 aa6.68□□□□□ -1.34
LINC01239-201ENST00000433645 FOXR1Q6PIV2 292 aa6.68□□□□□ -1.34
LINC01239-201ENST00000433645 COL26A1Q96A83 441 aa6.68□□□□□ -1.34
LINC01239-201ENST00000433645 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
LINC01239-201ENST00000433645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.68□□□□□ -1.34
LINC01239-201ENST00000433645 USTQ9Y2C2 406 aa6.68□□□□□ -1.34
LINC01239-201ENST00000433645 WIPF1O43516 503 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 HIF1AQ16665 826 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 FIGNL1Q6PIW4 674 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 RIPOR1Q6ZS17 1223 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 C7orf43Q8WVR3 580 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 AIDAQ96BJ3 306 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 ZNF837Q96EG3 531 aaPredicted RBP6.67□□□□□ -1.34
LINC01239-201ENST00000433645 CFHR5Q9BXR6 569 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 NUCKS1Q9H1E3 243 aaKnown RBP6.67□□□□□ -1.34
LINC01239-201ENST00000433645 ZNF232Q9UNY5 417 aa6.67□□□□□ -1.34
LINC01239-201ENST00000433645 VEGFBP49765 207 aa6.66□□□□□ -1.34
LINC01239-201ENST00000433645 OCLNQ16625 522 aa6.66□□□□□ -1.34
LINC01239-201ENST00000433645 TBCELQ5QJ74 424 aa6.66□□□□□ -1.34
LINC01239-201ENST00000433645 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
LINC01239-201ENST00000433645 VWA5B2Q8N398 1253 aa6.66□□□□□ -1.34
LINC01239-201ENST00000433645 CUEDC1Q9NWM3 386 aaPredicted RBP6.66□□□□□ -1.34
LINC01239-201ENST00000433645 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
LINC01239-201ENST00000433645 TMEM88BA6NKF7 163 aa6.65□□□□□ -1.34
LINC01239-201ENST00000433645 TXLNAP40222 546 aa6.65□□□□□ -1.34
LINC01239-201ENST00000433645 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
LINC01239-201ENST00000433645 TRERF1Q96PN7 1200 aa6.65□□□□□ -1.34
LINC01239-201ENST00000433645 ZIC5Q96T25 663 aa6.65□□□□□ -1.34
LINC01239-201ENST00000433645 PHF24Q9UPV7 400 aa6.65□□□□□ -1.34
LINC01239-201ENST00000433645 A0A1W2PNR3 127 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 CDC14CA4D256 554 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
LINC01239-201ENST00000433645 THBS1P07996 1170 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 RTN1Q16799 776 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 ARSJQ5FYB0 599 aaPredicted RBP6.64□□□□□ -1.35
LINC01239-201ENST00000433645 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 MYO19Q96H55 970 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 RUBCNLQ9H714 662 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 GPAMQ9HCL2 828 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 CXXC1Q9P0U4 656 aaPredicted RBP6.64□□□□□ -1.35
LINC01239-201ENST00000433645 ANKIB1Q9P2G1 1089 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
LINC01239-201ENST00000433645 BICDL1Q6ZP65 573 aa6.63□□□□□ -1.35
LINC01239-201ENST00000433645 ALDH16A1Q8IZ83 802 aa6.63□□□□□ -1.35
LINC01239-201ENST00000433645 ARID3AQ99856 593 aa6.63□□□□□ -1.35
LINC01239-201ENST00000433645 PHACTR1Q9C0D0 580 aa6.63□□□□□ -1.35
LINC01239-201ENST00000433645 NDFIP2Q9NV92 336 aa6.63□□□□□ -1.35
LINC01239-201ENST00000433645 ATXN7L1Q9ULK2 861 aaPredicted RBP6.63□□□□□ -1.35
LINC01239-201ENST00000433645 PCDHGC4Q9Y5F7 938 aa6.63□□□□□ -1.35
LINC01239-201ENST00000433645 FAM157BP0CG42 384 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 GMPRP36959 345 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 LAMC2Q13753 1193 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 SH3PXD2AQ5TCZ1 1133 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 IER5Q5VY09 327 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 GPR161Q8N6U8 529 aaKnown RBP6.62□□□□□ -1.35
LINC01239-201ENST00000433645 RHPN1Q8TCX5 695 aa6.62□□□□□ -1.35
LINC01239-201ENST00000433645 CHMP7Q8WUX9 453 aaPredicted RBP6.62□□□□□ -1.35
LINC01239-201ENST00000433645 GTPBP3Q969Y2 492 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms