RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 FERMT3Q86UX7 667 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 MAP3K5Q99683 1374 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 SYNE3Q6ZMZ3 975 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 BLMP54132 1417 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 GLRX3O76003 335 aaKnown RBP14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 CASTP20810 708 aaKnown RBP14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 SLAIN2Q9P270 581 aa14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 EFCAB6Q5THR3 1501 aa14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 DHX16O60231 1041 aaKnown RBP14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
LRRTM1-206ENST00000433224 AKAP17AQ02040 695 aaKnown RBP14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 PKNOX2Q96KN3 472 aa14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 IQSEC3Q9UPP2 1182 aaPredicted RBP14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 A1BGP04217 495 aa14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 DDX11Q96FC9 970 aa14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 DDX46Q7L014 1031 aaKnown RBP14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 RRAGDQ9NQL2 400 aaPredicted RBP14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 KIF3AQ9Y496 699 aa14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 CYP46A1Q9Y6A2 500 aa14.93□□□□□ -0.02
LRRTM1-206ENST00000433224 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 PDE1AP54750 535 aa14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 USP19O94966 1318 aa14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 HTATSF1O43719 755 aaKnown RBP14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 GRM8O00222 908 aa14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 IL2RBP14784 551 aa14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 CPLX2Q6PUV4 134 aaKnown RBP14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 ZNF496Q96IT1 587 aaPredicted RBP14.92□□□□□ -0.02
LRRTM1-206ENST00000433224 GOLIM4O00461 696 aa14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 KSR2Q6VAB6 950 aa14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 ATP6V1DQ9Y5K8 247 aa14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 IFIT1P09914 478 aaKnown RBP14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
LRRTM1-206ENST00000433224 VPS53Q5VIR6 699 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 BLOC1S2Q6QNY1 142 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 SMC5Q8IY18 1101 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 ECHDC1Q9NTX5 307 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 MYOM2P54296 1465 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 CCDC83Q8IWF9 413 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 SETD1BQ9UPS6 1966 aaKnown RBP14.9□□□□□ -0.02
LRRTM1-206ENST00000433224 PSMA5P28066 241 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 RAB11FIP4Q86YS3 637 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 NOL10Q9BSC4 688 aaKnown RBP14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 NDUFB9Q9Y6M9 179 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 ATP8B2P98198 1209 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 DCTPP1Q9H773 170 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 GDPD2Q9HCC8 539 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 WWC3Q9ULE0 1092 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 RAB11FIP3O75154 756 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 HAND2P61296 217 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
LRRTM1-206ENST00000433224 TPM2P07951 284 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 DDB1Q16531 1140 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 CCDC82Q8N4S0 544 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 PDRG1Q9NUG6 133 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 USP16Q9Y5T5 823 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 KDM5AP29375 1690 aaKnown RBP14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 PLEKHM2Q8IWE5 1019 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 RAI14Q9P0K7 980 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 GOLGA6L6A8MZA4 724 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 HSP90AB3PQ58FF7 597 aa14.88□□□□□ -0.03
LRRTM1-206ENST00000433224 A2ML1A8K2U0 1454 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 SYCE3A1L190 88 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 TRIM29Q14134 588 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 CSPP1Q1MSJ5 1256 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 FAM89AQ96GI7 184 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 LRRC2Q9BYS8 371 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 ERICH2A1L162 156 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 ZSCAN30Q86W11 494 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 CCDC24Q8N4L8 307 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 LINS1Q8NG48 757 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 KIF1BO60333 1816 aa14.87□□□□□ -0.03
LRRTM1-206ENST00000433224 TET3O43151 1660 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 RRP9O43818 475 aaKnown RBP14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 ZNF592Q92610 1267 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
LRRTM1-206ENST00000433224 BICC1Q9H694 974 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms