RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 DMTNQ08495 405 aa9.52□□□□□ -0.89
CNKSR3-202ENST00000433165 KLHL40Q2TBA0 621 aa9.52□□□□□ -0.89
CNKSR3-202ENST00000433165 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
CNKSR3-202ENST00000433165 RLBP1P12271 317 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 ZNF445P59923 1031 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 NBPF6Q5VWK0 638 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 NBPF4Q96M43 638 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 POLKQ9UBT6 870 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 MEGF6O75095 1541 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 DDX54Q8TDD1 881 aaKnown RBP9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 STK32BQ9NY57 414 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 BTAF1O14981 1849 aa9.51□□□□□ -0.89
CNKSR3-202ENST00000433165 DOT1LQ8TEK3 1739 aa9.5□□□□□ -0.89
CNKSR3-202ENST00000433165 SHANK3Q9BYB0 1731 aa9.5□□□□□ -0.89
CNKSR3-202ENST00000433165 MCM5P33992 734 aa9.5□□□□□ -0.89
CNKSR3-202ENST00000433165 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
CNKSR3-202ENST00000433165 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
CNKSR3-202ENST00000433165 CCDC94Q9BW85 323 aaPredicted RBP9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 ZKSCAN5Q9Y2L8 839 aa9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 GOLGA6L22H0YM25 854 aa9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 ZSCAN20P17040 1043 aaPredicted RBP9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 R3HDM1Q15032 1099 aaKnown RBP9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 AMOTQ4VCS5 1084 aa9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
CNKSR3-202ENST00000433165 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 FBLN1P23142 703 aa9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 SASS6Q6UVJ0 657 aa9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 HDAC1Q13547 482 aaPredicted RBP9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 ACSBG1Q96GR2 724 aa9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 TNNQ9UQP3 1299 aa9.48□□□□□ -0.89
CNKSR3-202ENST00000433165 TNNT2P45379 298 aaPredicted RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 EIF4A2Q14240 407 aaKnown RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 IFNL2Q8IZJ0 200 aa9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 EYA1Q99502 592 aa9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 ZHX1Q9UKY1 873 aaPredicted RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 NCLP19338 710 aaKnown RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 NKX1-1Q15270 411 aaPredicted RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 KIF2CQ99661 725 aa9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 DDX49Q9Y6V7 483 aaKnown RBP9.47□□□□□ -0.89
CNKSR3-202ENST00000433165 LY75O60449 1722 aa9.46□□□□□ -0.89
CNKSR3-202ENST00000433165 CFAP53Q96M91 514 aa9.46□□□□□ -0.9
CNKSR3-202ENST00000433165 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
CNKSR3-202ENST00000433165 PAPPAQ13219 1627 aa9.46□□□□□ -0.9
CNKSR3-202ENST00000433165 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 KIF20AO95235 890 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 BAG4O95429 457 aaKnown RBP9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 GTPBP4Q9BZE4 634 aaKnown RBP9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 KCNQ2O43526 872 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 SSFA2P28290 1259 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 SLC15A2Q16348 729 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 WDR63Q8IWG1 891 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 CASZ1Q86V15 1759 aa9.45□□□□□ -0.9
CNKSR3-202ENST00000433165 ZSCAN23Q3MJ62 389 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 KDRP35968 1356 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 FLAD1Q8NFF5 587 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 RBSNQ9H1K0 784 aa9.44□□□□□ -0.9
CNKSR3-202ENST00000433165 DIAPH1O60610 1272 aaKnown RBP9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 CD2BP2O95400 341 aaKnown RBP9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 TMOD3Q9NYL9 352 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 ERVV-2B6SEH9 535 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 PHKG2P15735 406 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 NCBP3Q53F19 620 aaKnown RBP9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 CCNL1Q9UK58 526 aaPredicted RBP9.43□□□□□ -0.9
CNKSR3-202ENST00000433165 CYP27B1O15528 508 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 LETM1O95202 739 aaPredicted RBP9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 GTF2F1P35269 517 aaKnown RBP eCLIP9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 MTHFSP49914 203 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 PDE4CQ08493 712 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 ZKSCAN2Q63HK3 967 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 ITGB4P16144 1822 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 IL13P35225 146 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 PROM2Q8N271 834 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 MTFR1LQ9H019 292 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms