RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
SMPD4-206ENST00000433118 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
SMPD4-206ENST00000433118 GNAI2P04899 355 aa12.86□□□□□ -0.35
SMPD4-206ENST00000433118 SLC39A6Q13433 755 aa12.86□□□□□ -0.35
SMPD4-206ENST00000433118 NEK4P51957 841 aa12.85□□□□□ -0.35
SMPD4-206ENST00000433118 ZSCAN23Q3MJ62 389 aa12.85□□□□□ -0.35
SMPD4-206ENST00000433118 PXDNQ92626 1479 aa12.85□□□□□ -0.35
SMPD4-206ENST00000433118 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
SMPD4-206ENST00000433118 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-206ENST00000433118 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-206ENST00000433118 SLAIN2Q9P270 581 aa12.85□□□□□ -0.35
SMPD4-206ENST00000433118 ZNF445P59923 1031 aa12.84□□□□□ -0.35
SMPD4-206ENST00000433118 OSBPL3Q9H4L5 887 aa12.84□□□□□ -0.35
SMPD4-206ENST00000433118 CHPF2Q9P2E5 772 aa12.84□□□□□ -0.35
SMPD4-206ENST00000433118 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
SMPD4-206ENST00000433118 PPP1R9BQ96SB3 815 aa12.84□□□□□ -0.35
SMPD4-206ENST00000433118 LRRCC1Q9C099 1032 aa12.84□□□□□ -0.35
SMPD4-206ENST00000433118 TRIM6-TRIM34B2RNG4 842 aa12.83□□□□□ -0.35
SMPD4-206ENST00000433118 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.35
SMPD4-206ENST00000433118 RILPL2Q969X0 211 aa12.83□□□□□ -0.35
SMPD4-206ENST00000433118 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
SMPD4-206ENST00000433118 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
SMPD4-206ENST00000433118 NOL8Q76FK4 1167 aaKnown RBP12.83□□□□□ -0.36
SMPD4-206ENST00000433118 CHAMP1Q96JM3 812 aa12.83□□□□□ -0.36
SMPD4-206ENST00000433118 ZDHHC9Q9Y397 364 aa12.83□□□□□ -0.36
SMPD4-206ENST00000433118 MX1P20591 662 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 MCCP23508 829 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
SMPD4-206ENST00000433118 SPATA31A3Q5VYP0 1347 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-206ENST00000433118 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 GNAI3P08754 354 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 MSNP26038 577 aaKnown RBP12.82□□□□□ -0.36
SMPD4-206ENST00000433118 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-206ENST00000433118 ZSCAN30Q86W11 494 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 UBE2Q2Q8WVN8 375 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
SMPD4-206ENST00000433118 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
SMPD4-206ENST00000433118 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
SMPD4-206ENST00000433118 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
SMPD4-206ENST00000433118 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
SMPD4-206ENST00000433118 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-206ENST00000433118 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
SMPD4-206ENST00000433118 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
SMPD4-206ENST00000433118 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
SMPD4-206ENST00000433118 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
SMPD4-206ENST00000433118 SLIT3O75094 1523 aa12.8□□□□□ -0.36
SMPD4-206ENST00000433118 TRPM3Q9HCF6 1732 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-206ENST00000433118 PI4KAP2A4QPH2 592 aa12.8□□□□□ -0.36
SMPD4-206ENST00000433118 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
SMPD4-206ENST00000433118 PI4KAP1Q8N8J0 262 aa12.8□□□□□ -0.36
SMPD4-206ENST00000433118 TNS3Q68CZ2 1445 aa12.79□□□□□ -0.36
SMPD4-206ENST00000433118 MCM2P49736 904 aa12.79□□□□□ -0.36
SMPD4-206ENST00000433118 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
SMPD4-206ENST00000433118 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
SMPD4-206ENST00000433118 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
SMPD4-206ENST00000433118 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
SMPD4-206ENST00000433118 USP54Q70EL1 1684 aa12.78□□□□□ -0.36
SMPD4-206ENST00000433118 SYCE3A1L190 88 aa12.78□□□□□ -0.36
SMPD4-206ENST00000433118 CHMLP26374 656 aa12.78□□□□□ -0.36
SMPD4-206ENST00000433118 TMEM63CQ9P1W3 806 aa12.78□□□□□ -0.36
SMPD4-206ENST00000433118 MYL6BP14649 208 aa12.77□□□□□ -0.36
SMPD4-206ENST00000433118 UPF3BQ9BZI7 483 aaKnown RBP12.77□□□□□ -0.36
SMPD4-206ENST00000433118 NSFL1CQ9UNZ2 370 aaKnown RBP12.77□□□□□ -0.36
SMPD4-206ENST00000433118 CYP27B1O15528 508 aa12.77□□□□□ -0.37
SMPD4-206ENST00000433118 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-206ENST00000433118 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.37
SMPD4-206ENST00000433118 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-206ENST00000433118 PHKG2P15735 406 aa12.77□□□□□ -0.37
SMPD4-206ENST00000433118 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
SMPD4-206ENST00000433118 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
SMPD4-206ENST00000433118 KIF1AQ12756 1690 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 DCCP43146 1447 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 MEGF6O75095 1541 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-206ENST00000433118 ANAPC15P60006 121 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 FOXD4L6Q3SYB3 417 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-206ENST00000433118 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 FOXD4L3Q6VB84 417 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-206ENST00000433118 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 MBD3O95983 291 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
SMPD4-206ENST00000433118 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
SMPD4-206ENST00000433118 BRD1O95696 1058 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-206ENST00000433118 EVA1CP58658 441 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 ALS2Q96Q42 1657 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 CUL4AQ13619 759 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
SMPD4-206ENST00000433118 STAP2Q9UGK3 403 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms