RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
SF1-208ENST00000432725 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
SF1-208ENST00000432725 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
SF1-208ENST00000432725 ZNF784Q8NCA9 323 aaPredicted RBP20.54■□□□□ 0.88
SF1-208ENST00000432725 SRP68Q9UHB9 627 aaKnown RBP20.54■□□□□ 0.88
SF1-208ENST00000432725 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
SF1-208ENST00000432725 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
SF1-208ENST00000432725 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
SF1-208ENST00000432725 PARP3Q9Y6F1 533 aa20.53■□□□□ 0.88
SF1-208ENST00000432725 UBR2Q8IWV8 1755 aa20.53■□□□□ 0.88
SF1-208ENST00000432725 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.88
SF1-208ENST00000432725 TGFB2P61812 414 aa20.52■□□□□ 0.88
SF1-208ENST00000432725 FKBP8Q14318 412 aa20.52■□□□□ 0.88
SF1-208ENST00000432725 ZBTB1Q9Y2K1 713 aa20.52■□□□□ 0.88
SF1-208ENST00000432725 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
SF1-208ENST00000432725 C10orf71Q711Q0 1435 aa20.52■□□□□ 0.87
SF1-208ENST00000432725 HEG1Q9ULI3 1381 aa20.51■□□□□ 0.87
SF1-208ENST00000432725 STARD3NLO95772 234 aa20.51■□□□□ 0.87
SF1-208ENST00000432725 TEX13AQ9BXU3 409 aaPredicted RBP20.51■□□□□ 0.87
SF1-208ENST00000432725 SIPA1L3O60292 1781 aaPredicted RBP20.5■□□□□ 0.87
SF1-208ENST00000432725 BTBD11A6QL63 1104 aa20.5■□□□□ 0.87
SF1-208ENST00000432725 ZPR1O75312 459 aa20.5■□□□□ 0.87
SF1-208ENST00000432725 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
SF1-208ENST00000432725 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
SF1-208ENST00000432725 NARFQ9UHQ1 456 aa20.5■□□□□ 0.87
SF1-208ENST00000432725 COL15A1P39059 1388 aa20.49■□□□□ 0.87
SF1-208ENST00000432725 TM4SF1P30408 202 aa20.49■□□□□ 0.87
SF1-208ENST00000432725 ZNF521Q96K83 1311 aa20.49■□□□□ 0.87
SF1-208ENST00000432725 PXDNLA1KZ92 1463 aa20.49■□□□□ 0.87
SF1-208ENST00000432725 CHD4Q14839 1912 aa20.49■□□□□ 0.87
SF1-208ENST00000432725 DDR1Q08345 913 aa20.48■□□□□ 0.87
SF1-208ENST00000432725 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
SF1-208ENST00000432725 USPL1Q5W0Q7 1092 aa20.48■□□□□ 0.87
SF1-208ENST00000432725 MCM10Q7L590 875 aa20.48■□□□□ 0.87
SF1-208ENST00000432725 NEFLP07196 543 aa20.47■□□□□ 0.87
SF1-208ENST00000432725 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
SF1-208ENST00000432725 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
SF1-208ENST00000432725 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
SF1-208ENST00000432725 KIF13BQ9NQT8 1826 aa20.47■□□□□ 0.87
SF1-208ENST00000432725 APAF1O14727 1248 aa20.46■□□□□ 0.87
SF1-208ENST00000432725 KCNQ3O43525 872 aa20.46■□□□□ 0.87
SF1-208ENST00000432725 A0A0G2JLW4 131 aa20.45■□□□□ 0.86
SF1-208ENST00000432725 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
SF1-208ENST00000432725 NEFMP07197 916 aa20.45■□□□□ 0.86
SF1-208ENST00000432725 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
SF1-208ENST00000432725 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
SF1-208ENST00000432725 KIAA1551Q9HCM1 1747 aa20.44■□□□□ 0.86
SF1-208ENST00000432725 A0A087WZG4 1122 aa20.44■□□□□ 0.86
SF1-208ENST00000432725 DPEP1P16444 411 aa20.44■□□□□ 0.86
SF1-208ENST00000432725 GOLGA2Q08379 1002 aa20.44■□□□□ 0.86
SF1-208ENST00000432725 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
SF1-208ENST00000432725 IL6STP40189 918 aaPredicted RBP20.43■□□□□ 0.86
SF1-208ENST00000432725 NFIXQ14938 502 aa20.43■□□□□ 0.86
SF1-208ENST00000432725 WWC3Q9ULE0 1092 aa20.43■□□□□ 0.86
SF1-208ENST00000432725 KCNA3P22001 575 aa20.42■□□□□ 0.86
SF1-208ENST00000432725 TAF7Q15545 349 aaPredicted RBP20.42■□□□□ 0.86
SF1-208ENST00000432725 MAPK8IP3Q9UPT6 1336 aa20.42■□□□□ 0.86
SF1-208ENST00000432725 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
SF1-208ENST00000432725 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
SF1-208ENST00000432725 A1BGP04217 495 aa20.4■□□□□ 0.86
SF1-208ENST00000432725 SNRPA1P09661 255 aaKnown RBP20.4■□□□□ 0.86
SF1-208ENST00000432725 WDR63Q8IWG1 891 aa20.4■□□□□ 0.86
SF1-208ENST00000432725 USP16Q9Y5T5 823 aa20.4■□□□□ 0.86
SF1-208ENST00000432725 E9PSI1 815 aa20.39■□□□□ 0.85
SF1-208ENST00000432725 BCS1LQ9Y276 419 aa20.39■□□□□ 0.85
SF1-208ENST00000432725 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.85
SF1-208ENST00000432725 ADCY9O60503 1353 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 PRAMEF22A3QJZ6 481 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 SERPINB2P05120 415 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 SLFN5Q08AF3 891 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 WWC1Q8IX03 1113 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
SF1-208ENST00000432725 PIM2Q9P1W9 311 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 TBC1D2BQ9UPU7 963 aa20.37■□□□□ 0.85
SF1-208ENST00000432725 SUPT16HQ9Y5B9 1047 aaKnown RBP20.37■□□□□ 0.85
SF1-208ENST00000432725 N4BP2Q86UW6 1770 aaPredicted RBP20.36■□□□□ 0.85
SF1-208ENST00000432725 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
SF1-208ENST00000432725 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
SF1-208ENST00000432725 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
SF1-208ENST00000432725 ATP10DQ9P241 1426 aa20.35■□□□□ 0.85
SF1-208ENST00000432725 NRXN2Q9P2S2 1712 aa20.34■□□□□ 0.85
SF1-208ENST00000432725 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
SF1-208ENST00000432725 CHRNA5P30532 468 aa20.34■□□□□ 0.85
SF1-208ENST00000432725 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
SF1-208ENST00000432725 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
SF1-208ENST00000432725 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
SF1-208ENST00000432725 IL16Q14005 1332 aa20.33■□□□□ 0.85
SF1-208ENST00000432725 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
SF1-208ENST00000432725 BICDL1Q6ZP65 573 aa20.33■□□□□ 0.85
SF1-208ENST00000432725 CDCA7LQ96GN5 454 aa20.33■□□□□ 0.85
SF1-208ENST00000432725 NBPF26B4DH59 902 aa20.32■□□□□ 0.84
SF1-208ENST00000432725 NBPF10Q6P3W6 841 aaKnown RBP20.32■□□□□ 0.84
SF1-208ENST00000432725 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
SF1-208ENST00000432725 NBPF15Q8N660 670 aa20.32■□□□□ 0.84
SF1-208ENST00000432725 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
SF1-208ENST00000432725 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
SF1-208ENST00000432725 PIP4K2AP48426 406 aaPredicted RBP20.31■□□□□ 0.84
SF1-208ENST00000432725 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
SF1-208ENST00000432725 ARHGAP27Q6ZUM4 889 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms