RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
RTN1-204ENST00000432103 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
RTN1-204ENST00000432103 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
RTN1-204ENST00000432103 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
RTN1-204ENST00000432103 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
RTN1-204ENST00000432103 RLBP1P12271 317 aa17.42■□□□□ 0.38
RTN1-204ENST00000432103 SMARCC1Q92922 1105 aaPredicted RBP17.42■□□□□ 0.38
RTN1-204ENST00000432103 DOT1LQ8TEK3 1739 aa17.42■□□□□ 0.38
RTN1-204ENST00000432103 ITGB4P16144 1822 aa17.41■□□□□ 0.38
RTN1-204ENST00000432103 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
RTN1-204ENST00000432103 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
RTN1-204ENST00000432103 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
RTN1-204ENST00000432103 KCPQ6ZWJ8 1503 aa17.41■□□□□ 0.38
RTN1-204ENST00000432103 PTCD1O75127 700 aaKnown RBP17.41■□□□□ 0.38
RTN1-204ENST00000432103 CCT4P50991 539 aaKnown RBP17.41■□□□□ 0.38
RTN1-204ENST00000432103 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
RTN1-204ENST00000432103 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
RTN1-204ENST00000432103 MSH5O43196 834 aa17.4■□□□□ 0.38
RTN1-204ENST00000432103 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
RTN1-204ENST00000432103 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
RTN1-204ENST00000432103 TNNQ9UQP3 1299 aa17.39■□□□□ 0.38
RTN1-204ENST00000432103 LAMB4A4D0S4 1761 aa17.39■□□□□ 0.37
RTN1-204ENST00000432103 STARD3NLO95772 234 aa17.39■□□□□ 0.37
RTN1-204ENST00000432103 PRAMEF22A3QJZ6 481 aa17.38■□□□□ 0.37
RTN1-204ENST00000432103 G2E3Q7L622 706 aa17.38■□□□□ 0.37
RTN1-204ENST00000432103 ACSBG1Q96GR2 724 aa17.38■□□□□ 0.37
RTN1-204ENST00000432103 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
RTN1-204ENST00000432103 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
RTN1-204ENST00000432103 PXDNLA1KZ92 1463 aa17.38■□□□□ 0.37
RTN1-204ENST00000432103 B4GALNT3Q6L9W6 998 aa17.38■□□□□ 0.37
RTN1-204ENST00000432103 C5P01031 1676 aa17.37■□□□□ 0.37
RTN1-204ENST00000432103 RGS12O14924 1447 aa17.37■□□□□ 0.37
RTN1-204ENST00000432103 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
RTN1-204ENST00000432103 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
RTN1-204ENST00000432103 PDIA6Q15084 440 aa17.35■□□□□ 0.37
RTN1-204ENST00000432103 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
RTN1-204ENST00000432103 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
RTN1-204ENST00000432103 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
RTN1-204ENST00000432103 ZBTB40Q9NUA8 1239 aa17.34■□□□□ 0.37
RTN1-204ENST00000432103 MYL6BP14649 208 aa17.33■□□□□ 0.37
RTN1-204ENST00000432103 RXRBP28702 533 aa17.33■□□□□ 0.37
RTN1-204ENST00000432103 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.37
RTN1-204ENST00000432103 KRT27Q7Z3Y8 459 aa17.33■□□□□ 0.37
RTN1-204ENST00000432103 PALLDQ8WX93 1383 aa17.33■□□□□ 0.36
RTN1-204ENST00000432103 PI4KAP2A4QPH2 592 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
RTN1-204ENST00000432103 PI4KAP1Q8N8J0 262 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
RTN1-204ENST00000432103 F6X3S4 739 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 ANXA1P04083 346 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
RTN1-204ENST00000432103 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
RTN1-204ENST00000432103 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
RTN1-204ENST00000432103 NHSQ6T4R5 1651 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 ATP10DQ9P241 1426 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 LOC102724428A0A0B4J2F2 783 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 GNAI3P08754 354 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 SIK1P57059 783 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 DNAJC10Q8IXB1 793 aa17.31■□□□□ 0.36
RTN1-204ENST00000432103 KCNQ2O43526 872 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 ATP6V1AP38606 617 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
RTN1-204ENST00000432103 ANKRD13DQ6ZTN6 518 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 MAP3K2Q9Y2U5 619 aa17.3■□□□□ 0.36
RTN1-204ENST00000432103 ALDH1L1O75891 902 aa17.29■□□□□ 0.36
RTN1-204ENST00000432103 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
RTN1-204ENST00000432103 ADCY9O60503 1353 aa17.29■□□□□ 0.36
RTN1-204ENST00000432103 A1BGP04217 495 aa17.29■□□□□ 0.36
RTN1-204ENST00000432103 CYP19A1P11511 503 aaPredicted RBP17.29■□□□□ 0.36
RTN1-204ENST00000432103 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
RTN1-204ENST00000432103 PLBD2Q8NHP8 589 aa17.29■□□□□ 0.36
RTN1-204ENST00000432103 ZNF831Q5JPB2 1677 aa17.28■□□□□ 0.36
RTN1-204ENST00000432103 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
RTN1-204ENST00000432103 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
RTN1-204ENST00000432103 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
RTN1-204ENST00000432103 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
RTN1-204ENST00000432103 NBPF14Q5TI25 921 aa17.27■□□□□ 0.36
RTN1-204ENST00000432103 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
RTN1-204ENST00000432103 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
RTN1-204ENST00000432103 LINS1Q8NG48 757 aa17.27■□□□□ 0.36
RTN1-204ENST00000432103 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.36
RTN1-204ENST00000432103 BEND3Q5T5X7 828 aa17.27■□□□□ 0.35
RTN1-204ENST00000432103 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
RTN1-204ENST00000432103 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
RTN1-204ENST00000432103 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
RTN1-204ENST00000432103 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
RTN1-204ENST00000432103 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
RTN1-204ENST00000432103 METTL22Q9BUU2 404 aaPredicted RBP17.26■□□□□ 0.35
RTN1-204ENST00000432103 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
RTN1-204ENST00000432103 GNAI2P04899 355 aa17.25■□□□□ 0.35
RTN1-204ENST00000432103 CCDC87Q9NVE4 849 aa17.25■□□□□ 0.35
RTN1-204ENST00000432103 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
RTN1-204ENST00000432103 TJP1Q07157 1748 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms