RNA–Protein interactions for RNA: ENST00000431505.6

RHBDL3-202, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-202ENST00000431505 N4BP2Q86UW6 1770 aaPredicted RBP25.21■■□□□ 1.63
RHBDL3-202ENST00000431505 COL15A1P39059 1388 aa25.21■■□□□ 1.63
RHBDL3-202ENST00000431505 CANXP27824 592 aaKnown RBP25.21■■□□□ 1.63
RHBDL3-202ENST00000431505 USPL1Q5W0Q7 1092 aa25.21■■□□□ 1.63
RHBDL3-202ENST00000431505 FMNL2Q96PY5 1086 aa25.21■■□□□ 1.63
RHBDL3-202ENST00000431505 HEG1Q9ULI3 1381 aa25.2■■□□□ 1.63
RHBDL3-202ENST00000431505 A0A0G2JLW4 131 aa25.2■■□□□ 1.62
RHBDL3-202ENST00000431505 RALBP1Q15311 655 aa25.2■■□□□ 1.62
RHBDL3-202ENST00000431505 NARFQ9UHQ1 456 aa25.2■■□□□ 1.62
RHBDL3-202ENST00000431505 DDX10Q13206 875 aaKnown RBP25.19■■□□□ 1.62
RHBDL3-202ENST00000431505 NPM2Q86SE8 214 aaKnown RBP25.19■■□□□ 1.62
RHBDL3-202ENST00000431505 PXDNLA1KZ92 1463 aa25.19■■□□□ 1.62
RHBDL3-202ENST00000431505 A0A087WZG4 1122 aa25.18■■□□□ 1.62
RHBDL3-202ENST00000431505 HTATSF1O43719 755 aaKnown RBP25.18■■□□□ 1.62
RHBDL3-202ENST00000431505 MCM10Q7L590 875 aa25.17■■□□□ 1.62
RHBDL3-202ENST00000431505 PNNQ9H307 717 aaKnown RBP25.17■■□□□ 1.62
RHBDL3-202ENST00000431505 BCS1LQ9Y276 419 aa25.17■■□□□ 1.62
RHBDL3-202ENST00000431505 DPEP1P16444 411 aa25.16■■□□□ 1.62
RHBDL3-202ENST00000431505 TM4SF1P30408 202 aa25.16■■□□□ 1.62
RHBDL3-202ENST00000431505 POLRMTO00411 1230 aaKnown RBP25.15■■□□□ 1.62
RHBDL3-202ENST00000431505 DDR1Q08345 913 aa25.15■■□□□ 1.62
RHBDL3-202ENST00000431505 ZNF330Q9Y3S2 320 aaPredicted RBP25.15■■□□□ 1.62
RHBDL3-202ENST00000431505 KIAA1551Q9HCM1 1747 aa25.14■■□□□ 1.61
RHBDL3-202ENST00000431505 EIF5P55010 431 aaKnown RBP25.13■■□□□ 1.61
RHBDL3-202ENST00000431505 GIGYF1O75420 1035 aaPredicted RBP25.12■■□□□ 1.61
RHBDL3-202ENST00000431505 PIM2Q9P1W9 311 aa25.12■■□□□ 1.61
RHBDL3-202ENST00000431505 KCNQ3O43525 872 aa25.11■■□□□ 1.61
RHBDL3-202ENST00000431505 IL6STP40189 918 aaPredicted RBP25.11■■□□□ 1.61
RHBDL3-202ENST00000431505 DCTN1Q14203 1278 aa25.11■■□□□ 1.61
RHBDL3-202ENST00000431505 NFIXQ14938 502 aa25.11■■□□□ 1.61
RHBDL3-202ENST00000431505 PLEKHF1Q96S99 279 aa25.11■■□□□ 1.61
RHBDL3-202ENST00000431505 TAF7Q15545 349 aaPredicted RBP25.1■■□□□ 1.61
RHBDL3-202ENST00000431505 BRCA1P38398 1863 aaKnown RBP25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 SNRPA1P09661 255 aaKnown RBP25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 ARHGAP27Q6ZUM4 889 aa25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 DLG5Q8TDM6 1919 aa25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 ATP10DQ9P241 1426 aa25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 MAPK8IP3Q9UPT6 1336 aa25.09■■□□□ 1.61
RHBDL3-202ENST00000431505 A1BGP04217 495 aa25.08■■□□□ 1.61
RHBDL3-202ENST00000431505 SERPINB2P05120 415 aa25.08■■□□□ 1.61
RHBDL3-202ENST00000431505 KCNA3P22001 575 aa25.08■■□□□ 1.61
RHBDL3-202ENST00000431505 BCL2L12Q9HB09 334 aa25.08■■□□□ 1.61
RHBDL3-202ENST00000431505 MYBBP1AQ9BQG0 1328 aaKnown RBP25.08■■□□□ 1.6
RHBDL3-202ENST00000431505 C1QTNF8P60827 252 aa25.07■■□□□ 1.6
RHBDL3-202ENST00000431505 DALRD3Q5D0E6 543 aaKnown RBP25.07■■□□□ 1.6
RHBDL3-202ENST00000431505 BICDL1Q6ZP65 573 aa25.07■■□□□ 1.6
RHBDL3-202ENST00000431505 GPBP1L1Q9HC44 474 aaPredicted RBP25.07■■□□□ 1.6
RHBDL3-202ENST00000431505 TBC1D2BQ9UPU7 963 aa25.07■■□□□ 1.6
RHBDL3-202ENST00000431505 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
RHBDL3-202ENST00000431505 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
RHBDL3-202ENST00000431505 USP16Q9Y5T5 823 aa25.06■■□□□ 1.6
RHBDL3-202ENST00000431505 ARFGEF1Q9Y6D6 1849 aa25.05■■□□□ 1.6
RHBDL3-202ENST00000431505 CHRNA5P30532 468 aa25.04■■□□□ 1.6
RHBDL3-202ENST00000431505 ADCY9O60503 1353 aa25.04■■□□□ 1.6
RHBDL3-202ENST00000431505 ZEB1P37275 1124 aaPredicted RBP25.03■■□□□ 1.6
RHBDL3-202ENST00000431505 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
RHBDL3-202ENST00000431505 TBC1D9BQ66K14 1250 aa25.02■■□□□ 1.6
RHBDL3-202ENST00000431505 DZIP3Q86Y13 1208 aaKnown RBP25.02■■□□□ 1.6
RHBDL3-202ENST00000431505 ZNF526Q8TF50 670 aaPredicted RBP25.02■■□□□ 1.6
RHBDL3-202ENST00000431505 NPHP1O15259 732 aa25.01■■□□□ 1.59
RHBDL3-202ENST00000431505 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
RHBDL3-202ENST00000431505 SCN7AQ01118 1682 aa25.01■■□□□ 1.59
RHBDL3-202ENST00000431505 PRAMEF22A3QJZ6 481 aa25■■□□□ 1.59
RHBDL3-202ENST00000431505 SETDB2Q96T68 719 aa25■■□□□ 1.59
RHBDL3-202ENST00000431505 H0YIN7 160 aa24.99■■□□□ 1.59
RHBDL3-202ENST00000431505 CAMTA2O94983 1202 aa24.99■■□□□ 1.59
RHBDL3-202ENST00000431505 CARMIL3Q8ND23 1372 aa24.99■■□□□ 1.59
RHBDL3-202ENST00000431505 PIP4K2AP48426 406 aaPredicted RBP24.98■■□□□ 1.59
RHBDL3-202ENST00000431505 ZNF652Q9Y2D9 606 aa24.98■■□□□ 1.59
RHBDL3-202ENST00000431505 C2CD5Q86YS7 1000 aa24.97■■□□□ 1.59
RHBDL3-202ENST00000431505 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
RHBDL3-202ENST00000431505 PDE6BP35913 854 aa24.96■■□□□ 1.59
RHBDL3-202ENST00000431505 CLEC4GQ6UXB4 293 aa24.96■■□□□ 1.59
RHBDL3-202ENST00000431505 PRKRIP1Q9H875 184 aaPredicted RBP24.96■■□□□ 1.59
RHBDL3-202ENST00000431505 SENP3-EIF4A1A0A087X0R7 540 aa24.95■■□□□ 1.58
RHBDL3-202ENST00000431505 RIPK4P57078 832 aa24.95■■□□□ 1.58
RHBDL3-202ENST00000431505 TTLL6Q8N841 843 aa24.95■■□□□ 1.58
RHBDL3-202ENST00000431505 THUMPD2Q9BTF0 503 aaKnown RBP24.95■■□□□ 1.58
RHBDL3-202ENST00000431505 BRIP1Q9BX63 1249 aa24.95■■□□□ 1.58
RHBDL3-202ENST00000431505 BCORQ6W2J9 1755 aa24.95■■□□□ 1.58
RHBDL3-202ENST00000431505 LMOD3Q0VAK6 560 aa24.94■■□□□ 1.58
RHBDL3-202ENST00000431505 CNBD1Q8NA66 436 aa24.94■■□□□ 1.58
RHBDL3-202ENST00000431505 KDM3BQ7LBC6 1761 aa24.93■■□□□ 1.58
RHBDL3-202ENST00000431505 DLEC1Q9Y238 1755 aa24.93■■□□□ 1.58
RHBDL3-202ENST00000431505 ST5P78524 1137 aa24.93■■□□□ 1.58
RHBDL3-202ENST00000431505 WDR43Q15061 677 aaKnown RBP eCLIP24.93■■□□□ 1.58
RHBDL3-202ENST00000431505 C9orf131Q5VYM1 1079 aa24.93■■□□□ 1.58
RHBDL3-202ENST00000431505 EIF4A1P60842 406 aaKnown RBP24.92■■□□□ 1.58
RHBDL3-202ENST00000431505 PRR5LQ6MZQ0 368 aa24.92■■□□□ 1.58
RHBDL3-202ENST00000431505 LAMB4A4D0S4 1761 aa24.92■■□□□ 1.58
RHBDL3-202ENST00000431505 NBPF26B4DH59 902 aa24.91■■□□□ 1.58
RHBDL3-202ENST00000431505 TMPOP42166 694 aaKnown RBP24.91■■□□□ 1.58
RHBDL3-202ENST00000431505 NBPF10Q6P3W6 841 aaKnown RBP24.91■■□□□ 1.58
RHBDL3-202ENST00000431505 NBPF15Q8N660 670 aa24.91■■□□□ 1.58
RHBDL3-202ENST00000431505 ZNF622Q969S3 477 aaKnown RBP eCLIP24.91■■□□□ 1.58
RHBDL3-202ENST00000431505 RGL2O15211 777 aa24.9■■□□□ 1.58
RHBDL3-202ENST00000431505 NBPF5PQ86XG9 351 aaPredicted RBP24.9■■□□□ 1.58
RHBDL3-202ENST00000431505 RNF181Q9P0P0 153 aa24.9■■□□□ 1.58
RHBDL3-202ENST00000431505 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms