RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
GCSHP3-201ENST00000431120 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
GCSHP3-201ENST00000431120 COL3A1P02461 1466 aaPredicted RBP18.23■□□□□ 0.51
GCSHP3-201ENST00000431120 COL15A1P39059 1388 aa18.23■□□□□ 0.51
GCSHP3-201ENST00000431120 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
GCSHP3-201ENST00000431120 ARFGEF1Q9Y6D6 1849 aa18.22■□□□□ 0.51
GCSHP3-201ENST00000431120 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
GCSHP3-201ENST00000431120 TEFQ10587 303 aa18.22■□□□□ 0.51
GCSHP3-201ENST00000431120 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
GCSHP3-201ENST00000431120 A0A087WZG4 1122 aa18.21■□□□□ 0.51
GCSHP3-201ENST00000431120 CFAP53Q96M91 514 aa18.21■□□□□ 0.51
GCSHP3-201ENST00000431120 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
GCSHP3-201ENST00000431120 TOMM70O94826 608 aa18.2■□□□□ 0.5
GCSHP3-201ENST00000431120 NFIXQ14938 502 aa18.2■□□□□ 0.5
GCSHP3-201ENST00000431120 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
GCSHP3-201ENST00000431120 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
GCSHP3-201ENST00000431120 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
GCSHP3-201ENST00000431120 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
GCSHP3-201ENST00000431120 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
GCSHP3-201ENST00000431120 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
GCSHP3-201ENST00000431120 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 SERPINB2P05120 415 aa18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 CHRNA5P30532 468 aa18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
GCSHP3-201ENST00000431120 NRXN2Q9P2S2 1712 aa18.16■□□□□ 0.5
GCSHP3-201ENST00000431120 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
GCSHP3-201ENST00000431120 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
GCSHP3-201ENST00000431120 ZC3H4Q9UPT8 1303 aaKnown RBP18.16■□□□□ 0.5
GCSHP3-201ENST00000431120 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
GCSHP3-201ENST00000431120 APLP1P51693 650 aa18.15■□□□□ 0.5
GCSHP3-201ENST00000431120 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
GCSHP3-201ENST00000431120 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
GCSHP3-201ENST00000431120 RNF181Q9P0P0 153 aa18.14■□□□□ 0.49
GCSHP3-201ENST00000431120 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
GCSHP3-201ENST00000431120 TTLL6Q8N841 843 aa18.13■□□□□ 0.49
GCSHP3-201ENST00000431120 RBM46Q8TBY0 533 aaKnown RBP18.13■□□□□ 0.49
GCSHP3-201ENST00000431120 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
GCSHP3-201ENST00000431120 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
GCSHP3-201ENST00000431120 H0YIN7 160 aa18.12■□□□□ 0.49
GCSHP3-201ENST00000431120 CNGB1Q14028 1251 aaPredicted RBP18.12■□□□□ 0.49
GCSHP3-201ENST00000431120 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
GCSHP3-201ENST00000431120 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
GCSHP3-201ENST00000431120 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
GCSHP3-201ENST00000431120 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
GCSHP3-201ENST00000431120 BRIP1Q9BX63 1249 aa18.11■□□□□ 0.49
GCSHP3-201ENST00000431120 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 LMNB1P20700 586 aa18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 PPP2R1AP30153 589 aa18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 PDE6BP35913 854 aa18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 FSTL1Q12841 308 aa18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 C2CD5Q86YS7 1000 aa18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 RTF1Q92541 710 aaKnown RBP18.1■□□□□ 0.49
GCSHP3-201ENST00000431120 CARMIL3Q8ND23 1372 aa18.09■□□□□ 0.49
GCSHP3-201ENST00000431120 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
GCSHP3-201ENST00000431120 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
GCSHP3-201ENST00000431120 TBC1D9BQ66K14 1250 aa18.09■□□□□ 0.49
GCSHP3-201ENST00000431120 DLEC1Q9Y238 1755 aa18.09■□□□□ 0.49
GCSHP3-201ENST00000431120 SBF1O95248 1867 aa18.08■□□□□ 0.49
GCSHP3-201ENST00000431120 RGL2O15211 777 aa18.08■□□□□ 0.48
GCSHP3-201ENST00000431120 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
GCSHP3-201ENST00000431120 TBC1D2BQ9UPU7 963 aa18.08■□□□□ 0.48
GCSHP3-201ENST00000431120 A1BGP04217 495 aa18.07■□□□□ 0.48
GCSHP3-201ENST00000431120 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
GCSHP3-201ENST00000431120 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
GCSHP3-201ENST00000431120 SETDB2Q96T68 719 aa18.07■□□□□ 0.48
GCSHP3-201ENST00000431120 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
GCSHP3-201ENST00000431120 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
GCSHP3-201ENST00000431120 CAMTA2O94983 1202 aa18.06■□□□□ 0.48
GCSHP3-201ENST00000431120 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
GCSHP3-201ENST00000431120 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
GCSHP3-201ENST00000431120 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 GLTPD2A6NH11 291 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 KCNQ3O43525 872 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 RASSF7Q02833 373 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 RRAGCQ9HB90 399 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
GCSHP3-201ENST00000431120 NEFMP07197 916 aa18.03■□□□□ 0.48
GCSHP3-201ENST00000431120 ST5P78524 1137 aa18.03■□□□□ 0.48
GCSHP3-201ENST00000431120 IFFO2Q5TF58 517 aa18.03■□□□□ 0.48
GCSHP3-201ENST00000431120 DNAJC5GQ8N7S2 189 aa18.03■□□□□ 0.48
GCSHP3-201ENST00000431120 CNKSR1Q969H4 720 aa18.03■□□□□ 0.48
GCSHP3-201ENST00000431120 ZNF622Q969S3 477 aaKnown RBP eCLIP18.03■□□□□ 0.48
GCSHP3-201ENST00000431120 NFKBIEO00221 500 aa18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 NPHP1O15259 732 aa18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 VEGFAP15692 232 aaPredicted RBP18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 STYK1Q6J9G0 422 aa18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 MCM10Q7L590 875 aa18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 SMC1BQ8NDV3 1235 aa18.02■□□□□ 0.48
GCSHP3-201ENST00000431120 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
GCSHP3-201ENST00000431120 SRGNP10124 158 aa18■□□□□ 0.47
GCSHP3-201ENST00000431120 PRELPP51888 382 aa18■□□□□ 0.47
GCSHP3-201ENST00000431120 DPY19L2Q6NUT2 758 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms