RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 ANO8Q9HCE9 1232 aaPredicted RBP18.42■□□□□ 0.54
PSMD1-204ENST00000431051 CLEC17AQ6ZS10 378 aa18.41■□□□□ 0.54
PSMD1-204ENST00000431051 PRAMEF22A3QJZ6 481 aa18.41■□□□□ 0.54
PSMD1-204ENST00000431051 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
PSMD1-204ENST00000431051 PTMSP20962 102 aa18.41■□□□□ 0.54
PSMD1-204ENST00000431051 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
PSMD1-204ENST00000431051 RHPN1Q8TCX5 695 aa18.41■□□□□ 0.54
PSMD1-204ENST00000431051 PXDNQ92626 1479 aa18.4■□□□□ 0.54
PSMD1-204ENST00000431051 NCLP19338 710 aaKnown RBP18.4■□□□□ 0.54
PSMD1-204ENST00000431051 POLA2Q14181 598 aa18.4■□□□□ 0.54
PSMD1-204ENST00000431051 PROSER3Q2NL68 480 aa18.4■□□□□ 0.54
PSMD1-204ENST00000431051 ANKRD24Q8TF21 1146 aa18.4■□□□□ 0.54
PSMD1-204ENST00000431051 TMX3Q96JJ7 454 aa18.4■□□□□ 0.54
PSMD1-204ENST00000431051 CWC22Q9HCG8 908 aaKnown RBP18.4■□□□□ 0.54
PSMD1-204ENST00000431051 ARHGEF25Q86VW2 580 aa18.39■□□□□ 0.53
PSMD1-204ENST00000431051 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.53
PSMD1-204ENST00000431051 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
PSMD1-204ENST00000431051 ZDHHC9Q9Y397 364 aa18.39■□□□□ 0.53
PSMD1-204ENST00000431051 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
PSMD1-204ENST00000431051 MCCP23508 829 aa18.39■□□□□ 0.53
PSMD1-204ENST00000431051 ADCY9O60503 1353 aa18.38■□□□□ 0.53
PSMD1-204ENST00000431051 HOXB7P09629 217 aa18.38■□□□□ 0.53
PSMD1-204ENST00000431051 KLHL40Q2TBA0 621 aa18.38■□□□□ 0.53
PSMD1-204ENST00000431051 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
PSMD1-204ENST00000431051 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
PSMD1-204ENST00000431051 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
PSMD1-204ENST00000431051 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
PSMD1-204ENST00000431051 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
PSMD1-204ENST00000431051 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
PSMD1-204ENST00000431051 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
PSMD1-204ENST00000431051 KIF1BPQ96EK5 621 aa18.36■□□□□ 0.53
PSMD1-204ENST00000431051 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
PSMD1-204ENST00000431051 CWF19L2Q2TBE0 894 aaKnown RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 LMBRD1Q9NUN5 540 aa18.35■□□□□ 0.53
PSMD1-204ENST00000431051 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 N4BP2Q86UW6 1770 aaPredicted RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 CAVIN1Q6NZI2 390 aaKnown RBP18.35■□□□□ 0.53
PSMD1-204ENST00000431051 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
PSMD1-204ENST00000431051 AOX1Q06278 1338 aa18.34■□□□□ 0.53
PSMD1-204ENST00000431051 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
PSMD1-204ENST00000431051 AIMP1Q12904 312 aaKnown RBP18.33■□□□□ 0.53
PSMD1-204ENST00000431051 PA2G4Q9UQ80 394 aaKnown RBP18.33■□□□□ 0.53
PSMD1-204ENST00000431051 KRT28Q7Z3Y7 464 aa18.33■□□□□ 0.52
PSMD1-204ENST00000431051 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
PSMD1-204ENST00000431051 ANAPC15P60006 121 aa18.32■□□□□ 0.52
PSMD1-204ENST00000431051 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
PSMD1-204ENST00000431051 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
PSMD1-204ENST00000431051 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
PSMD1-204ENST00000431051 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
PSMD1-204ENST00000431051 MCM2P49736 904 aa18.31■□□□□ 0.52
PSMD1-204ENST00000431051 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
PSMD1-204ENST00000431051 FOXD4L6Q3SYB3 417 aaPredicted RBP18.3■□□□□ 0.52
PSMD1-204ENST00000431051 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
PSMD1-204ENST00000431051 FOXD4L3Q6VB84 417 aaPredicted RBP18.3■□□□□ 0.52
PSMD1-204ENST00000431051 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
PSMD1-204ENST00000431051 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
PSMD1-204ENST00000431051 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
PSMD1-204ENST00000431051 GPT2Q8TD30 523 aa18.3■□□□□ 0.52
PSMD1-204ENST00000431051 DDX17Q92841 729 aaKnown RBP18.3■□□□□ 0.52
PSMD1-204ENST00000431051 SGSM2O43147 1006 aa18.29■□□□□ 0.52
PSMD1-204ENST00000431051 HSPA4P34932 840 aa18.29■□□□□ 0.52
PSMD1-204ENST00000431051 CUL4AQ13619 759 aa18.29■□□□□ 0.52
PSMD1-204ENST00000431051 ZSCAN23Q3MJ62 389 aa18.29■□□□□ 0.52
PSMD1-204ENST00000431051 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
PSMD1-204ENST00000431051 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
PSMD1-204ENST00000431051 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
PSMD1-204ENST00000431051 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
PSMD1-204ENST00000431051 NLRP2Q9NX02 1062 aa18.28■□□□□ 0.52
PSMD1-204ENST00000431051 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
PSMD1-204ENST00000431051 NSFL1CQ9UNZ2 370 aaKnown RBP18.27■□□□□ 0.52
PSMD1-204ENST00000431051 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.52
PSMD1-204ENST00000431051 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
PSMD1-204ENST00000431051 ERBB3P21860 1342 aa18.27■□□□□ 0.52
PSMD1-204ENST00000431051 RAD50Q92878 1312 aa18.27■□□□□ 0.52
PSMD1-204ENST00000431051 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
PSMD1-204ENST00000431051 SLIT3O75094 1523 aa18.27■□□□□ 0.51
PSMD1-204ENST00000431051 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 MYL6BP14649 208 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
PSMD1-204ENST00000431051 BRD1O95696 1058 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 MTX1Q13505 466 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 TRIM44Q96DX7 344 aaPredicted RBP18.26■□□□□ 0.51
PSMD1-204ENST00000431051 SUCLG2Q96I99 432 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 SNX14Q9Y5W7 946 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
PSMD1-204ENST00000431051 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
PSMD1-204ENST00000431051 GLRX3O76003 335 aaKnown RBP18.25■□□□□ 0.51
PSMD1-204ENST00000431051 KIAA1211Q6ZU35 1233 aa18.25■□□□□ 0.51
PSMD1-204ENST00000431051 ERBB4Q15303 1308 aa18.25■□□□□ 0.51
PSMD1-204ENST00000431051 IFIT2P09913 472 aaKnown RBP18.25■□□□□ 0.51
PSMD1-204ENST00000431051 CPA1P15085 419 aa18.25■□□□□ 0.51
PSMD1-204ENST00000431051 AACSQ86V21 672 aa18.25■□□□□ 0.51
PSMD1-204ENST00000431051 RAPGEF4Q8WZA2 1011 aa18.25■□□□□ 0.51
PSMD1-204ENST00000431051 KAZALD1Q96I82 304 aa18.25■□□□□ 0.51
PSMD1-204ENST00000431051 BICC1Q9H694 974 aaKnown RBP18.25■□□□□ 0.51
PSMD1-204ENST00000431051 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms