RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ITPK1Q13572 414 aa14.17□□□□□ -0.14
CHD4-202ENST00000430771 EZH2Q15910 746 aaKnown RBP14.17□□□□□ -0.14
CHD4-202ENST00000430771 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
CHD4-202ENST00000430771 C8orf58Q8NAV2 365 aa14.17□□□□□ -0.14
CHD4-202ENST00000430771 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
CHD4-202ENST00000430771 LINC00116Q8NCU8 138 aa14.16□□□□□ -0.14
CHD4-202ENST00000430771 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 MYH14Q7Z406 1995 aaKnown RBP14.15□□□□□ -0.14
CHD4-202ENST00000430771 PRAMEF22A3QJZ6 481 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
CHD4-202ENST00000430771 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
CHD4-202ENST00000430771 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
CHD4-202ENST00000430771 CCDC30Q5VVM6 783 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 AK7Q96M32 723 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 LRRC4BQ9NT99 713 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 CCDC87Q9NVE4 849 aa14.15□□□□□ -0.14
CHD4-202ENST00000430771 CRKLP46109 303 aaKnown RBP14.14□□□□□ -0.15
CHD4-202ENST00000430771 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
CHD4-202ENST00000430771 C4AP0C0L4 1744 aa14.14□□□□□ -0.15
CHD4-202ENST00000430771 SCN7AQ01118 1682 aa14.14□□□□□ -0.15
CHD4-202ENST00000430771 VAMP4O75379 141 aa14.13□□□□□ -0.15
CHD4-202ENST00000430771 KCNQ4P56696 695 aa14.13□□□□□ -0.15
CHD4-202ENST00000430771 ALDH1L2Q3SY69 923 aa14.13□□□□□ -0.15
CHD4-202ENST00000430771 RC3H1Q5TC82 1133 aaKnown RBP14.13□□□□□ -0.15
CHD4-202ENST00000430771 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
CHD4-202ENST00000430771 PROM2Q8N271 834 aa14.13□□□□□ -0.15
CHD4-202ENST00000430771 BCORQ6W2J9 1755 aa14.13□□□□□ -0.15
CHD4-202ENST00000430771 COL15A1P39059 1388 aa14.12□□□□□ -0.15
CHD4-202ENST00000430771 GNPATO15228 680 aa14.12□□□□□ -0.15
CHD4-202ENST00000430771 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
CHD4-202ENST00000430771 STK32BQ9NY57 414 aa14.12□□□□□ -0.15
CHD4-202ENST00000430771 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
CHD4-202ENST00000430771 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
CHD4-202ENST00000430771 IL6STP40189 918 aaPredicted RBP14.11□□□□□ -0.15
CHD4-202ENST00000430771 NBPF14Q5TI25 921 aa14.11□□□□□ -0.15
CHD4-202ENST00000430771 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHD4-202ENST00000430771 CHPF2Q9P2E5 772 aa14.11□□□□□ -0.15
CHD4-202ENST00000430771 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
CHD4-202ENST00000430771 ADRA2BP18089 450 aa14.1□□□□□ -0.15
CHD4-202ENST00000430771 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
CHD4-202ENST00000430771 SSFA2P28290 1259 aa14.1□□□□□ -0.15
CHD4-202ENST00000430771 SMC4Q9NTJ3 1288 aa14.1□□□□□ -0.15
CHD4-202ENST00000430771 HYPKQ9NX55 129 aa14.1□□□□□ -0.15
CHD4-202ENST00000430771 KIF16BQ96L93 1317 aa14.1□□□□□ -0.15
CHD4-202ENST00000430771 A0A087WZG4 1122 aa14.09□□□□□ -0.15
CHD4-202ENST00000430771 A1BGP04217 495 aa14.09□□□□□ -0.15
CHD4-202ENST00000430771 ZNF827Q17R98 1081 aa14.09□□□□□ -0.15
CHD4-202ENST00000430771 INTS5Q6P9B9 1019 aaKnown RBP14.09□□□□□ -0.15
CHD4-202ENST00000430771 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
CHD4-202ENST00000430771 ZNF330Q9Y3S2 320 aaPredicted RBP14.09□□□□□ -0.15
CHD4-202ENST00000430771 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
CHD4-202ENST00000430771 NBPF26B4DH59 902 aa14.08□□□□□ -0.16
CHD4-202ENST00000430771 RPS6KA4O75676 772 aa14.08□□□□□ -0.16
CHD4-202ENST00000430771 MYL6BP14649 208 aa14.08□□□□□ -0.16
CHD4-202ENST00000430771 RARSP54136 660 aaKnown RBP14.08□□□□□ -0.16
CHD4-202ENST00000430771 NBPF10Q6P3W6 841 aaKnown RBP14.08□□□□□ -0.16
CHD4-202ENST00000430771 NBPF15Q8N660 670 aa14.08□□□□□ -0.16
CHD4-202ENST00000430771 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
CHD4-202ENST00000430771 ANO8Q9HCE9 1232 aaPredicted RBP14.08□□□□□ -0.16
CHD4-202ENST00000430771 TFCP2L1Q9NZI6 479 aa14.08□□□□□ -0.16
CHD4-202ENST00000430771 ANKRD36CQ5JPF3 1778 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 CENPBP07199 599 aaPredicted RBP14.07□□□□□ -0.16
CHD4-202ENST00000430771 PIP4K2AP48426 406 aaPredicted RBP14.07□□□□□ -0.16
CHD4-202ENST00000430771 PDIA6Q15084 440 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 SLC15A2Q16348 729 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 PROSER3Q2NL68 480 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 KIF6Q6ZMV9 814 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 SSH1Q8WYL5 1049 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
CHD4-202ENST00000430771 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
CHD4-202ENST00000430771 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
CHD4-202ENST00000430771 PHF14O94880 888 aa14.06□□□□□ -0.16
CHD4-202ENST00000430771 DDX58O95786 925 aaKnown RBP14.06□□□□□ -0.16
CHD4-202ENST00000430771 ANXA1P04083 346 aa14.06□□□□□ -0.16
CHD4-202ENST00000430771 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
CHD4-202ENST00000430771 EIF5P55010 431 aaKnown RBP14.06□□□□□ -0.16
CHD4-202ENST00000430771 BRPF1P55201 1214 aaPredicted RBP14.06□□□□□ -0.16
CHD4-202ENST00000430771 BCL2L13Q9BXK5 485 aa14.06□□□□□ -0.16
CHD4-202ENST00000430771 PTPRCP08575 1304 aa14.06□□□□□ -0.16
CHD4-202ENST00000430771 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
CHD4-202ENST00000430771 CASZ1Q86V15 1759 aa14.05□□□□□ -0.16
CHD4-202ENST00000430771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.05□□□□□ -0.16
CHD4-202ENST00000430771 FLIIQ13045 1269 aa14.05□□□□□ -0.16
CHD4-202ENST00000430771 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
CHD4-202ENST00000430771 LRP10Q7Z4F1 713 aa14.05□□□□□ -0.16
CHD4-202ENST00000430771 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
CHD4-202ENST00000430771 FKBP5Q13451 457 aaPredicted RBP14.04□□□□□ -0.16
CHD4-202ENST00000430771 DZIP3Q86Y13 1208 aaKnown RBP14.04□□□□□ -0.16
CHD4-202ENST00000430771 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
CHD4-202ENST00000430771 PNPLA7Q6ZV29 1317 aa14.04□□□□□ -0.16
CHD4-202ENST00000430771 RGL2O15211 777 aa14.03□□□□□ -0.16
CHD4-202ENST00000430771 RFC4P35249 363 aa14.03□□□□□ -0.16
CHD4-202ENST00000430771 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
CHD4-202ENST00000430771 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
CHD4-202ENST00000430771 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.03□□□□□ -0.16
CHD4-202ENST00000430771 PHAXQ9H814 394 aaKnown RBP14.03□□□□□ -0.16
CHD4-202ENST00000430771 ZNF652Q9Y2D9 606 aa14.03□□□□□ -0.16
CHD4-202ENST00000430771 MAP3K15Q6ZN16 1313 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms