RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
PTPRA-206ENST00000430705 POLRMTO00411 1230 aaKnown RBP21.88■■□□□ 1.09
PTPRA-206ENST00000430705 USPL1Q5W0Q7 1092 aa21.88■■□□□ 1.09
PTPRA-206ENST00000430705 BCL2L12Q9HB09 334 aa21.88■■□□□ 1.09
PTPRA-206ENST00000430705 GIGYF1O75420 1035 aaPredicted RBP21.87■■□□□ 1.09
PTPRA-206ENST00000430705 TM4SF1P30408 202 aa21.87■■□□□ 1.09
PTPRA-206ENST00000430705 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
PTPRA-206ENST00000430705 HEG1Q9ULI3 1381 aa21.87■■□□□ 1.09
PTPRA-206ENST00000430705 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
PTPRA-206ENST00000430705 DLEC1Q9Y238 1755 aa21.85■■□□□ 1.09
PTPRA-206ENST00000430705 ZNF790Q6PG37 636 aa21.85■■□□□ 1.09
PTPRA-206ENST00000430705 CEP350Q5VT06 3117 aa21.84■■□□□ 1.09
PTPRA-206ENST00000430705 TEFQ10587 303 aa21.84■■□□□ 1.09
PTPRA-206ENST00000430705 NARFQ9UHQ1 456 aa21.84■■□□□ 1.09
PTPRA-206ENST00000430705 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
PTPRA-206ENST00000430705 KCNQ3O43525 872 aa21.83■■□□□ 1.09
PTPRA-206ENST00000430705 TTC5Q8N0Z6 440 aa21.83■■□□□ 1.09
PTPRA-206ENST00000430705 BCORQ6W2J9 1755 aa21.83■■□□□ 1.09
PTPRA-206ENST00000430705 NFIXQ14938 502 aa21.82■■□□□ 1.08
PTPRA-206ENST00000430705 ZPR1O75312 459 aa21.81■■□□□ 1.08
PTPRA-206ENST00000430705 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
PTPRA-206ENST00000430705 CANXP27824 592 aaKnown RBP21.81■■□□□ 1.08
PTPRA-206ENST00000430705 EIF5P55010 431 aaKnown RBP21.81■■□□□ 1.08
PTPRA-206ENST00000430705 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
PTPRA-206ENST00000430705 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
PTPRA-206ENST00000430705 ANKRD31Q8N7Z5 1873 aa21.8■■□□□ 1.08
PTPRA-206ENST00000430705 CHRNA5P30532 468 aa21.8■■□□□ 1.08
PTPRA-206ENST00000430705 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
PTPRA-206ENST00000430705 ZNF526Q8TF50 670 aaPredicted RBP21.79■■□□□ 1.08
PTPRA-206ENST00000430705 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
PTPRA-206ENST00000430705 COL11A2P13942 1736 aaPredicted RBP21.78■■□□□ 1.08
PTPRA-206ENST00000430705 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
PTPRA-206ENST00000430705 FCHSD2O94868 740 aa21.78■■□□□ 1.08
PTPRA-206ENST00000430705 MCM10Q7L590 875 aa21.78■■□□□ 1.08
PTPRA-206ENST00000430705 STARD3NLO95772 234 aa21.77■■□□□ 1.08
PTPRA-206ENST00000430705 GPBP1L1Q9HC44 474 aaPredicted RBP21.77■■□□□ 1.08
PTPRA-206ENST00000430705 KDM3BQ7LBC6 1761 aa21.76■■□□□ 1.07
PTPRA-206ENST00000430705 PRAMEF22A3QJZ6 481 aa21.76■■□□□ 1.07
PTPRA-206ENST00000430705 BTBD11A6QL63 1104 aa21.76■■□□□ 1.07
PTPRA-206ENST00000430705 DCTN1Q14203 1278 aa21.76■■□□□ 1.07
PTPRA-206ENST00000430705 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
PTPRA-206ENST00000430705 LAMB4A4D0S4 1761 aa21.75■■□□□ 1.07
PTPRA-206ENST00000430705 PIM2Q9P1W9 311 aa21.75■■□□□ 1.07
PTPRA-206ENST00000430705 A1BGP04217 495 aa21.74■■□□□ 1.07
PTPRA-206ENST00000430705 SERPINB2P05120 415 aa21.74■■□□□ 1.07
PTPRA-206ENST00000430705 ARHGAP27Q6ZUM4 889 aa21.74■■□□□ 1.07
PTPRA-206ENST00000430705 IL6STP40189 918 aaPredicted RBP21.73■■□□□ 1.07
PTPRA-206ENST00000430705 DALRD3Q5D0E6 543 aaKnown RBP21.73■■□□□ 1.07
PTPRA-206ENST00000430705 TBC1D9BQ66K14 1250 aa21.73■■□□□ 1.07
PTPRA-206ENST00000430705 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
PTPRA-206ENST00000430705 SBF1O95248 1867 aa21.73■■□□□ 1.07
PTPRA-206ENST00000430705 KIF3CO14782 793 aa21.72■■□□□ 1.07
PTPRA-206ENST00000430705 TBC1D2BQ9UPU7 963 aa21.72■■□□□ 1.07
PTPRA-206ENST00000430705 A0A087WZG4 1122 aa21.71■■□□□ 1.07
PTPRA-206ENST00000430705 PIP4K2AP48426 406 aaPredicted RBP21.71■■□□□ 1.07
PTPRA-206ENST00000430705 BICDL1Q6ZP65 573 aa21.71■■□□□ 1.07
PTPRA-206ENST00000430705 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
PTPRA-206ENST00000430705 USP16Q9Y5T5 823 aa21.71■■□□□ 1.07
PTPRA-206ENST00000430705 CAMTA2O94983 1202 aa21.7■■□□□ 1.06
PTPRA-206ENST00000430705 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
PTPRA-206ENST00000430705 HTATSF1O43719 755 aaKnown RBP21.68■■□□□ 1.06
PTPRA-206ENST00000430705 C9orf131Q5VYM1 1079 aa21.68■■□□□ 1.06
PTPRA-206ENST00000430705 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
PTPRA-206ENST00000430705 PRELPP51888 382 aa21.67■■□□□ 1.06
PTPRA-206ENST00000430705 TIAM2Q8IVF5 1701 aa21.66■■□□□ 1.06
PTPRA-206ENST00000430705 NBPF26B4DH59 902 aa21.66■■□□□ 1.06
PTPRA-206ENST00000430705 PRR5LQ6MZQ0 368 aa21.66■■□□□ 1.06
PTPRA-206ENST00000430705 NBPF10Q6P3W6 841 aaKnown RBP21.66■■□□□ 1.06
PTPRA-206ENST00000430705 CCDC24Q8N4L8 307 aa21.66■■□□□ 1.06
PTPRA-206ENST00000430705 NBPF15Q8N660 670 aa21.66■■□□□ 1.06
PTPRA-206ENST00000430705 RASSF7Q02833 373 aa21.65■■□□□ 1.06
PTPRA-206ENST00000430705 C2CD5Q86YS7 1000 aa21.65■■□□□ 1.06
PTPRA-206ENST00000430705 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
PTPRA-206ENST00000430705 ARFGEF2Q9Y6D5 1785 aa21.64■■□□□ 1.06
PTPRA-206ENST00000430705 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
PTPRA-206ENST00000430705 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.05
PTPRA-206ENST00000430705 NMRK2Q9NPI5 230 aa21.64■■□□□ 1.05
PTPRA-206ENST00000430705 CACNA1SQ13698 1873 aa21.63■■□□□ 1.05
PTPRA-206ENST00000430705 TAF7Q15545 349 aaPredicted RBP21.63■■□□□ 1.05
PTPRA-206ENST00000430705 THUMPD2Q9BTF0 503 aaKnown RBP21.63■■□□□ 1.05
PTPRA-206ENST00000430705 TNRC6CQ9HCJ0 1690 aaKnown RBP21.63■■□□□ 1.05
PTPRA-206ENST00000430705 NFE2L2Q16236 605 aa21.62■■□□□ 1.05
PTPRA-206ENST00000430705 RNF181Q9P0P0 153 aa21.62■■□□□ 1.05
PTPRA-206ENST00000430705 FER1L6Q2WGJ9 1857 aa21.61■■□□□ 1.05
PTPRA-206ENST00000430705 NFKBIEO00221 500 aa21.6■■□□□ 1.05
PTPRA-206ENST00000430705 TTLL6Q8N841 843 aa21.6■■□□□ 1.05
PTPRA-206ENST00000430705 BRIP1Q9BX63 1249 aa21.6■■□□□ 1.05
PTPRA-206ENST00000430705 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
PTPRA-206ENST00000430705 H0YIN7 160 aa21.59■■□□□ 1.05
PTPRA-206ENST00000430705 HSPA6P17066 643 aa21.59■■□□□ 1.05
PTPRA-206ENST00000430705 SLX4Q8IY92 1834 aa21.59■■□□□ 1.05
PTPRA-206ENST00000430705 CNBD1Q8NA66 436 aa21.58■■□□□ 1.05
PTPRA-206ENST00000430705 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
PTPRA-206ENST00000430705 PDE6BP35913 854 aa21.56■■□□□ 1.04
PTPRA-206ENST00000430705 EIF4A1P60842 406 aaKnown RBP21.56■■□□□ 1.04
PTPRA-206ENST00000430705 RALBP1Q15311 655 aa21.56■■□□□ 1.04
PTPRA-206ENST00000430705 DDX10Q13206 875 aaKnown RBP21.55■■□□□ 1.04
PTPRA-206ENST00000430705 HLFQ16534 295 aa21.55■■□□□ 1.04
PTPRA-206ENST00000430705 CLEC4GQ6UXB4 293 aa21.55■■□□□ 1.04
PTPRA-206ENST00000430705 NUP98P52948 1817 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms