RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 CCDC39Q9UFE4 941 aa6.96□□□□□ -1.29
UBR3-204ENST00000430321 ERCC4Q92889 916 aaPredicted RBP6.96□□□□□ -1.3
UBR3-204ENST00000430321 KIF1BPQ96EK5 621 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 CYP46A1Q9Y6A2 500 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 STK24Q9Y6E0 443 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 MAPKBP1O60336 1514 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 GNAQP50148 359 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 TCIRG1Q13488 830 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 IDI1Q13907 227 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 RABEP1Q15276 862 aa6.96□□□□□ -1.3
UBR3-204ENST00000430321 TRPC5Q9UL62 973 aaPredicted RBP6.96□□□□□ -1.3
UBR3-204ENST00000430321 AKAP4Q5JQC9 854 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 OTUD7BQ6GQQ9 843 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 CTCFLQ8NI51 663 aaPredicted RBP6.95□□□□□ -1.3
UBR3-204ENST00000430321 FERMT1Q9BQL6 677 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 ABCA5Q8WWZ7 1642 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 ZFYP08048 801 aaPredicted RBP6.95□□□□□ -1.3
UBR3-204ENST00000430321 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 TFCP2L1Q9NZI6 479 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 GOLGA6L3A6NEY3 463 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 TRAPPC3LQ5T215 181 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 UTP14AQ9BVJ6 771 aaKnown RBP6.95□□□□□ -1.3
UBR3-204ENST00000430321 LPXNO60711 386 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 MYL6BP14649 208 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 PABPC4Q13310 644 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBR3-204ENST00000430321 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
UBR3-204ENST00000430321 MPRIPQ6WCQ1 1025 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 CRBNQ96SW2 442 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 TSG101Q99816 390 aa6.95□□□□□ -1.3
UBR3-204ENST00000430321 FOXO3O43524 673 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 GLRX3O76003 335 aaKnown RBP6.94□□□□□ -1.3
UBR3-204ENST00000430321 MATR3P43243 847 aaKnown RBP eCLIP6.94□□□□□ -1.32e-6■■■□□ 16.9
UBR3-204ENST00000430321 MAP3K9P80192 1104 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 TMC4Q7Z404 712 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 NLRP1Q9C000 1473 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 CBFA2T2O43439 604 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 ATP6V1AP38606 617 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 RRP12Q5JTH9 1297 aaKnown RBP6.94□□□□□ -1.3
UBR3-204ENST00000430321 FLT4P35916 1363 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 GNAT2P19087 354 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 SETQ01105 290 aaPredicted RBP6.94□□□□□ -1.3
UBR3-204ENST00000430321 DPY19L2Q6NUT2 758 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 DCAF5Q96JK2 942 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 TRAPPC8Q9Y2L5 1435 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 ALDH1L1O75891 902 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 ALDH1B1P30837 517 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 CETN1Q12798 172 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 ERMNQ8TAM6 284 aa6.94□□□□□ -1.3
UBR3-204ENST00000430321 BMP15O95972 392 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 MBD3O95983 291 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 ZFYVE27Q5T4F4 411 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 GLT8D2Q9H1C3 349 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 LRRFIP2Q9Y608 721 aaKnown RBP6.93□□□□□ -1.3
UBR3-204ENST00000430321 CEP170Q5SW79 1584 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 ATP7AQ04656 1500 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 DKC1O60832 514 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBR3-204ENST00000430321 KINO60870 393 aaKnown RBP6.93□□□□□ -1.3
UBR3-204ENST00000430321 AACSQ86V21 672 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 TMTC2Q8N394 836 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 STK38Q15208 465 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 COG6Q9Y2V7 657 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 ACEP12821 1306 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 SYCP2Q9BX26 1530 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 CCDC96Q2M329 555 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 HOOK3Q86VS8 718 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 DNAAF4Q8WXU2 420 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 ZRANB1Q9UGI0 708 aa6.93□□□□□ -1.3
UBR3-204ENST00000430321 CASTP20810 708 aaKnown RBP6.92□□□□□ -1.3
UBR3-204ENST00000430321 AMPD3Q01432 767 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 DCTN1Q14203 1278 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 NAPBQ9H115 298 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 SLC4A3P48751 1232 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 IQCEQ6IPM2 695 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 CATIPQ7Z7H3 387 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 RUFY1Q96T51 708 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 SLC12A5Q9H2X9 1139 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 KCNG1Q9UIX4 513 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 YTHDC2Q9H6S0 1430 aaKnown RBP6.92□□□□□ -1.3
UBR3-204ENST00000430321 RBM26Q5T8P6 1007 aaKnown RBP6.92□□□□□ -1.3
UBR3-204ENST00000430321 CCDC148Q8NFR7 591 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 CNNM2Q9H8M5 875 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 H0YIN7 160 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 CEBPAP49715 358 aaPredicted RBP6.92□□□□□ -1.3
UBR3-204ENST00000430321 TMOD4Q9NZQ9 345 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 CFAP45Q9UL16 551 aa6.92□□□□□ -1.3
UBR3-204ENST00000430321 EPB41L2O43491 1005 aaKnown RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 EXOSC9Q06265 439 aaKnown RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 TNFAIP1Q13829 316 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 MYD88Q99836 296 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 USP21Q9UK80 565 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 VPS37CA5D8V6 355 aaPredicted RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 RXRBP28702 533 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 JAKMIP3Q5VZ66 844 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 DUSP27Q5VZP5 1158 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 NOL8Q76FK4 1167 aaKnown RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 CEP57L1Q8IYX8 460 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 RNF216Q9NWF9 866 aaPredicted RBP6.91□□□□□ -1.3
UBR3-204ENST00000430321 MAST1Q9Y2H9 1570 aa6.91□□□□□ -1.3
UBR3-204ENST00000430321 ABCC1P33527 1531 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms