RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PCDHGC4Q9Y5F7 938 aa5.93□□□□□ -1.46
HMGB1P9-201ENST00000429856 SPDYE3A6NKU9 549 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 SPATA31C1P0DKV0 1188 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 UBTFP17480 764 aaKnown RBP5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 ADH6P28332 368 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 NBPF11Q86T75 865 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 WWC1Q8IX03 1113 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 PLVAPQ9BX97 442 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 CRISPLD1Q9H336 500 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 ZFP64Q9NPA5 681 aa5.92□□□□□ -1.46
HMGB1P9-201ENST00000429856 ARTNQ5T4W7 220 aa5.91□□□□□ -1.46
HMGB1P9-201ENST00000429856 ZCCHC2Q9C0B9 1178 aaKnown RBP5.91□□□□□ -1.46
HMGB1P9-201ENST00000429856 TBC1D2BQ9UPU7 963 aa5.91□□□□□ -1.46
HMGB1P9-201ENST00000429856 HRH3Q9Y5N1 445 aa5.91□□□□□ -1.46
HMGB1P9-201ENST00000429856 APBA3O96018 575 aa5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 NR1H3Q13133 447 aa5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 RSPO4Q2I0M5 234 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 NLRP8Q86W28 1048 aa5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 PPARGC1BQ86YN6 1023 aaKnown RBP5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 RHBDD1Q8TEB9 315 aa5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 FHDC1Q9C0D6 1143 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 GDPD2Q9HCC8 539 aa5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 AVENQ9NQS1 362 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 COG6Q9Y2V7 657 aa5.9□□□□□ -1.46
HMGB1P9-201ENST00000429856 ATXN7O15265 892 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 GPR37L1O60883 481 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 WASHC4Q2M389 1173 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 PRRT3Q5FWE3 981 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 TBC1D9Q6ZT07 1266 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 C1orf216Q8TAB5 229 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 PRR12Q9ULL5 1215 aa5.89□□□□□ -1.47
HMGB1P9-201ENST00000429856 ALAS2P22557 587 aa5.88□□□□□ -1.47
HMGB1P9-201ENST00000429856 ABL2P42684 1182 aa5.88□□□□□ -1.47
HMGB1P9-201ENST00000429856 NKAPLQ5M9Q1 402 aa5.88□□□□□ -1.47
HMGB1P9-201ENST00000429856 FAM182BQ5T319 152 aa5.88□□□□□ -1.47
HMGB1P9-201ENST00000429856 TRIM11Q96F44 468 aa5.88□□□□□ -1.47
HMGB1P9-201ENST00000429856 USP4Q13107 963 aa5.87□□□□□ -1.47
HMGB1P9-201ENST00000429856 ERICH6Q7L0X2 663 aa5.87□□□□□ -1.47
HMGB1P9-201ENST00000429856 AIDAQ96BJ3 306 aa5.87□□□□□ -1.47
HMGB1P9-201ENST00000429856 A6NJR5 290 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 DYRK3O43781 588 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 MAPTP10636 758 aaKnown RBP5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 EIF4G2P78344 907 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 TNP2Q05952 138 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 IRF5Q13568 498 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 TPSG1Q9NRR2 321 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 KLF15Q9UIH9 416 aa5.86□□□□□ -1.47
HMGB1P9-201ENST00000429856 SOX11P35716 441 aa5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 TLR1Q15399 786 aa5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 FOXD4L6Q3SYB3 417 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 FOXD4L3Q6VB84 417 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 FCHSD1Q86WN1 690 aa5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 POM121Q96HA1 1249 aa5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 NACC1Q96RE7 527 aa5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 CDCA7Q9BWT1 371 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 NIFKQ9BYG3 293 aaKnown RBP5.85□□□□□ -1.47
HMGB1P9-201ENST00000429856 KHNYNO15037 678 aaKnown RBP5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 CD33P20138 364 aa5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 PLA2G4AP47712 749 aa5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 PCBP4P57723 403 aaKnown RBP5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 TRIM28Q13263 835 aaKnown RBP5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 PRSS36Q5K4E3 855 aa5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 PROSER2Q86WR7 435 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 DNAAF2Q9NVR5 837 aaKnown RBP5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 CEP126Q9P2H0 1117 aa5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 GJA3Q9Y6H8 435 aa5.84□□□□□ -1.47
HMGB1P9-201ENST00000429856 ELOA3CA0A087WX78 387 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 A0A1W2PNR3 127 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 DCDC2BA2VCK2 349 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 ELOA3DA6NLF2 546 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 VAC14Q08AM6 782 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 ELOA3BQ3SY89 546 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 ZNF468Q5VIY5 522 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 ELOA3Q8NG57 546 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 CLUAP1Q96AJ1 413 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 SIRT1Q96EB6 747 aa5.83□□□□□ -1.48
HMGB1P9-201ENST00000429856 TATP17735 454 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P9-201ENST00000429856 NBPF1Q3BBV0 1214 aa5.82□□□□□ -1.48
HMGB1P9-201ENST00000429856 CCDC85AQ96PX6 553 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P9-201ENST00000429856 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
HMGB1P9-201ENST00000429856 ETNK1Q9HBU6 452 aa5.82□□□□□ -1.48
HMGB1P9-201ENST00000429856 MARK1Q9P0L2 795 aa5.82□□□□□ -1.48
HMGB1P9-201ENST00000429856 SEMA3FQ13275 785 aa5.81□□□□□ -1.48
HMGB1P9-201ENST00000429856 LAMC2Q13753 1193 aa5.81□□□□□ -1.48
HMGB1P9-201ENST00000429856 C14orf37Q86TY3 774 aa5.81□□□□□ -1.48
HMGB1P9-201ENST00000429856 FAM157BP0CG42 384 aa5.8□□□□□ -1.48
HMGB1P9-201ENST00000429856 ATP4AP20648 1035 aa5.8□□□□□ -1.48
HMGB1P9-201ENST00000429856 LRP8Q14114 963 aa5.8□□□□□ -1.48
HMGB1P9-201ENST00000429856 FNBP4Q8N3X1 1017 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P9-201ENST00000429856 GOLGA2P5Q9HBQ8 144 aa5.8□□□□□ -1.48
HMGB1P9-201ENST00000429856 DOLKQ9UPQ8 538 aa5.8□□□□□ -1.48
HMGB1P9-201ENST00000429856 C9orf172C9J069 976 aa5.79□□□□□ -1.48
HMGB1P9-201ENST00000429856 H2AFB1P0C5Y9 115 aa5.79□□□□□ -1.48
HMGB1P9-201ENST00000429856 H2AFB2P0C5Z0 115 aa5.79□□□□□ -1.48
HMGB1P9-201ENST00000429856 ARXQ96QS3 562 aa5.79□□□□□ -1.48
HMGB1P9-201ENST00000429856 ZMYND15Q9H091 742 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms