RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 ATRNO75882 1429 aa10.97□□□□□ -0.65
NUP98-207ENST00000429801 NCLP19338 710 aaKnown RBP10.97□□□□□ -0.65
NUP98-207ENST00000429801 CABP4P57796 275 aa10.97□□□□□ -0.65
NUP98-207ENST00000429801 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
NUP98-207ENST00000429801 VIRMAQ69YN4 1812 aaKnown RBP10.97□□□□□ -0.65
NUP98-207ENST00000429801 TWISTNBQ3B726 338 aaPredicted RBP10.96□□□□□ -0.65
NUP98-207ENST00000429801 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.65
NUP98-207ENST00000429801 NFATC2IPQ8NCF5 419 aa10.96□□□□□ -0.65
NUP98-207ENST00000429801 QTRT2Q9H974 415 aaKnown RBP10.96□□□□□ -0.65
NUP98-207ENST00000429801 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
NUP98-207ENST00000429801 MRC1P22897 1456 aa10.96□□□□□ -0.65
NUP98-207ENST00000429801 RARSP54136 660 aaKnown RBP10.96□□□□□ -0.66
NUP98-207ENST00000429801 SMAP1Q8IYB5 467 aaPredicted RBP10.96□□□□□ -0.66
NUP98-207ENST00000429801 A0A0G2JS52 829 aa10.95□□□□□ -0.66
NUP98-207ENST00000429801 VAMP4O75379 141 aa10.95□□□□□ -0.66
NUP98-207ENST00000429801 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
NUP98-207ENST00000429801 C8orf58Q8NAV2 365 aa10.95□□□□□ -0.66
NUP98-207ENST00000429801 SOS1Q07889 1333 aaPredicted RBP10.95□□□□□ -0.66
NUP98-207ENST00000429801 TSPYL6Q8N831 410 aa10.95□□□□□ -0.66
NUP98-207ENST00000429801 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
NUP98-207ENST00000429801 ELL2O00472 640 aaPredicted RBP10.94□□□□□ -0.66
NUP98-207ENST00000429801 RRP1P56182 461 aaKnown RBP10.94□□□□□ -0.66
NUP98-207ENST00000429801 ALDH1L2Q3SY69 923 aa10.94□□□□□ -0.66
NUP98-207ENST00000429801 GLI3P10071 1580 aa10.94□□□□□ -0.66
NUP98-207ENST00000429801 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
NUP98-207ENST00000429801 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
NUP98-207ENST00000429801 KDM3BQ7LBC6 1761 aa10.94□□□□□ -0.66
NUP98-207ENST00000429801 ZNF790Q6PG37 636 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 THSD7AQ9UPZ6 1657 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 BCAR3O75815 825 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 CERS3Q8IU89 383 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 MARCH10Q8NA82 808 aaPredicted RBP10.93□□□□□ -0.66
NUP98-207ENST00000429801 SMC4Q9NTJ3 1288 aa10.93□□□□□ -0.66
NUP98-207ENST00000429801 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
NUP98-207ENST00000429801 HOXB7P09629 217 aa10.92□□□□□ -0.66
NUP98-207ENST00000429801 KRT24Q2M2I5 525 aa10.92□□□□□ -0.66
NUP98-207ENST00000429801 IRX3P78415 501 aaPredicted RBP10.92□□□□□ -0.66
NUP98-207ENST00000429801 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
NUP98-207ENST00000429801 ANP32BQ92688 251 aaKnown RBP10.92□□□□□ -0.66
NUP98-207ENST00000429801 KCNQ3O43525 872 aa10.91□□□□□ -0.66
NUP98-207ENST00000429801 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
NUP98-207ENST00000429801 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
NUP98-207ENST00000429801 SLC39A6Q13433 755 aa10.91□□□□□ -0.66
NUP98-207ENST00000429801 TOGARAM1Q9Y4F4 1720 aa10.91□□□□□ -0.66
NUP98-207ENST00000429801 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
NUP98-207ENST00000429801 RBM6P78332 1123 aaKnown RBP10.9□□□□□ -0.66
NUP98-207ENST00000429801 SEPT12Q8IYM1 358 aa10.9□□□□□ -0.66
NUP98-207ENST00000429801 FMNL2Q96PY5 1086 aa10.9□□□□□ -0.66
NUP98-207ENST00000429801 CCDC30Q5VVM6 783 aa10.9□□□□□ -0.67
NUP98-207ENST00000429801 FAM43BQ6ZT52 329 aaPredicted RBP10.9□□□□□ -0.67
NUP98-207ENST00000429801 SYTL4Q96C24 671 aaPredicted RBP10.9□□□□□ -0.67
NUP98-207ENST00000429801 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.67
NUP98-207ENST00000429801 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
NUP98-207ENST00000429801 PLIN1O60240 522 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
NUP98-207ENST00000429801 PIGBQ92521 554 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 STK31Q9BXU1 1019 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 BCL9O00512 1426 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 PRIM1P49642 420 aaKnown RBP10.89□□□□□ -0.67
NUP98-207ENST00000429801 DMTNQ08495 405 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 MRPL50Q8N5N7 158 aaKnown RBP10.89□□□□□ -0.67
NUP98-207ENST00000429801 ARID3AQ99856 593 aa10.89□□□□□ -0.67
NUP98-207ENST00000429801 SNRPA1P09661 255 aaKnown RBP10.88□□□□□ -0.67
NUP98-207ENST00000429801 MS4A1P11836 297 aa10.88□□□□□ -0.67
NUP98-207ENST00000429801 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
NUP98-207ENST00000429801 ZNF496Q96IT1 587 aaPredicted RBP10.88□□□□□ -0.67
NUP98-207ENST00000429801 IGSF3O75054 1194 aa10.88□□□□□ -0.67
NUP98-207ENST00000429801 TPM2P07951 284 aa10.88□□□□□ -0.67
NUP98-207ENST00000429801 DOT1LQ8TEK3 1739 aa10.88□□□□□ -0.67
NUP98-207ENST00000429801 ITGB4P16144 1822 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 PDE3AQ14432 1141 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 ARHGAP45Q92619 1136 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
NUP98-207ENST00000429801 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 PATL2C9JE40 543 aaKnown RBP10.87□□□□□ -0.67
NUP98-207ENST00000429801 TCERG1O14776 1098 aaKnown RBP10.87□□□□□ -0.67
NUP98-207ENST00000429801 SLC4A2P04920 1241 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
NUP98-207ENST00000429801 RXRBP28702 533 aa10.87□□□□□ -0.67
NUP98-207ENST00000429801 UTP14CQ5TAP6 766 aaKnown RBP10.87□□□□□ -0.67
NUP98-207ENST00000429801 ATF7IPQ6VMQ6 1270 aa10.86□□□□□ -0.67
NUP98-207ENST00000429801 ATG3Q9NT62 314 aa10.86□□□□□ -0.67
NUP98-207ENST00000429801 ASAP1Q9ULH1 1129 aa10.86□□□□□ -0.67
NUP98-207ENST00000429801 HDAC5Q9UQL6 1122 aa10.86□□□□□ -0.67
NUP98-207ENST00000429801 FAM193AP78312 1265 aa10.86□□□□□ -0.67
NUP98-207ENST00000429801 UBR2Q8IWV8 1755 aa10.86□□□□□ -0.67
NUP98-207ENST00000429801 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
NUP98-207ENST00000429801 KRT27Q7Z3Y8 459 aa10.85□□□□□ -0.67
NUP98-207ENST00000429801 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
NUP98-207ENST00000429801 CHMP4CQ96CF2 233 aa10.85□□□□□ -0.67
NUP98-207ENST00000429801 DBF4Q9UBU7 674 aaPredicted RBP10.85□□□□□ -0.67
NUP98-207ENST00000429801 PTPRCP08575 1304 aa10.85□□□□□ -0.67
NUP98-207ENST00000429801 KCPQ6ZWJ8 1503 aa10.85□□□□□ -0.67
NUP98-207ENST00000429801 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
NUP98-207ENST00000429801 TEX13AQ9BXU3 409 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms