RNA–Protein interactions for RNA: ENST00000429794.1

CITED1-205, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 2

Gene CITED1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-205ENST00000429794 CC2D1BQ5T0F9 858 aaKnown RBP16.76■□□□□ 0.27
CITED1-205ENST00000429794 DLEC1Q9Y238 1755 aa16.76■□□□□ 0.27
CITED1-205ENST00000429794 COL15A1P39059 1388 aa16.76■□□□□ 0.27
CITED1-205ENST00000429794 SBF1O95248 1867 aa16.76■□□□□ 0.27
CITED1-205ENST00000429794 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
CITED1-205ENST00000429794 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
CITED1-205ENST00000429794 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
CITED1-205ENST00000429794 NARFQ9UHQ1 456 aa16.75■□□□□ 0.27
CITED1-205ENST00000429794 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
CITED1-205ENST00000429794 TOMM70O94826 608 aa16.73■□□□□ 0.27
CITED1-205ENST00000429794 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
CITED1-205ENST00000429794 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
CITED1-205ENST00000429794 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
CITED1-205ENST00000429794 STARD3NLO95772 234 aa16.71■□□□□ 0.27
CITED1-205ENST00000429794 CHRNA5P30532 468 aa16.71■□□□□ 0.27
CITED1-205ENST00000429794 NFIXQ14938 502 aa16.71■□□□□ 0.27
CITED1-205ENST00000429794 TNRC6CQ9HCJ0 1690 aaKnown RBP16.71■□□□□ 0.27
CITED1-205ENST00000429794 SCN7AQ01118 1682 aa16.7■□□□□ 0.26
CITED1-205ENST00000429794 APLP1P51693 650 aa16.7■□□□□ 0.26
CITED1-205ENST00000429794 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
CITED1-205ENST00000429794 A0A087WZG4 1122 aa16.69■□□□□ 0.26
CITED1-205ENST00000429794 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
CITED1-205ENST00000429794 TEFQ10587 303 aa16.69■□□□□ 0.26
CITED1-205ENST00000429794 TEX13AQ9BXU3 409 aaPredicted RBP16.69■□□□□ 0.26
CITED1-205ENST00000429794 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
CITED1-205ENST00000429794 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
CITED1-205ENST00000429794 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
CITED1-205ENST00000429794 HEG1Q9ULI3 1381 aa16.68■□□□□ 0.26
CITED1-205ENST00000429794 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
CITED1-205ENST00000429794 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
CITED1-205ENST00000429794 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
CITED1-205ENST00000429794 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
CITED1-205ENST00000429794 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
CITED1-205ENST00000429794 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
CITED1-205ENST00000429794 SERPINB2P05120 415 aa16.67■□□□□ 0.26
CITED1-205ENST00000429794 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
CITED1-205ENST00000429794 IL17REQ8NFR9 667 aa16.67■□□□□ 0.26
CITED1-205ENST00000429794 ZNF496Q96IT1 587 aaPredicted RBP16.67■□□□□ 0.26
CITED1-205ENST00000429794 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
CITED1-205ENST00000429794 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
CITED1-205ENST00000429794 WDR90Q96KV7 1748 aa16.65■□□□□ 0.26
CITED1-205ENST00000429794 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
CITED1-205ENST00000429794 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
CITED1-205ENST00000429794 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
CITED1-205ENST00000429794 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
CITED1-205ENST00000429794 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
CITED1-205ENST00000429794 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
CITED1-205ENST00000429794 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
CITED1-205ENST00000429794 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
CITED1-205ENST00000429794 TIAM2Q8IVF5 1701 aa16.63■□□□□ 0.25
CITED1-205ENST00000429794 H0YIN7 160 aa16.63■□□□□ 0.25
CITED1-205ENST00000429794 FSTL1Q12841 308 aa16.63■□□□□ 0.25
CITED1-205ENST00000429794 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
CITED1-205ENST00000429794 LMNB1P20700 586 aa16.62■□□□□ 0.25
CITED1-205ENST00000429794 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
CITED1-205ENST00000429794 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
CITED1-205ENST00000429794 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
CITED1-205ENST00000429794 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
CITED1-205ENST00000429794 DICER1Q9UPY3 1922 aaKnown RBP16.62■□□□□ 0.25
CITED1-205ENST00000429794 RASSF7Q02833 373 aa16.61■□□□□ 0.25
CITED1-205ENST00000429794 TBC1D9BQ66K14 1250 aa16.61■□□□□ 0.25
CITED1-205ENST00000429794 NPM2Q86SE8 214 aaKnown RBP16.61■□□□□ 0.25
CITED1-205ENST00000429794 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
CITED1-205ENST00000429794 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
CITED1-205ENST00000429794 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
CITED1-205ENST00000429794 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
CITED1-205ENST00000429794 PDE6BP35913 854 aa16.6■□□□□ 0.25
CITED1-205ENST00000429794 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
CITED1-205ENST00000429794 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
CITED1-205ENST00000429794 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
CITED1-205ENST00000429794 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
CITED1-205ENST00000429794 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
CITED1-205ENST00000429794 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
CITED1-205ENST00000429794 TBC1D2BQ9UPU7 963 aa16.59■□□□□ 0.25
CITED1-205ENST00000429794 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
CITED1-205ENST00000429794 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
CITED1-205ENST00000429794 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.24
CITED1-205ENST00000429794 NFKBIEO00221 500 aa16.57■□□□□ 0.24
CITED1-205ENST00000429794 CAMTA2O94983 1202 aa16.57■□□□□ 0.24
CITED1-205ENST00000429794 A1BGP04217 495 aa16.57■□□□□ 0.24
CITED1-205ENST00000429794 PRELPP51888 382 aa16.57■□□□□ 0.24
CITED1-205ENST00000429794 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
CITED1-205ENST00000429794 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
CITED1-205ENST00000429794 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
CITED1-205ENST00000429794 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
CITED1-205ENST00000429794 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
CITED1-205ENST00000429794 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
CITED1-205ENST00000429794 PPP2R1AP30153 589 aa16.56■□□□□ 0.24
CITED1-205ENST00000429794 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
CITED1-205ENST00000429794 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
CITED1-205ENST00000429794 RGL2O15211 777 aa16.55■□□□□ 0.24
CITED1-205ENST00000429794 KCNQ3O43525 872 aa16.55■□□□□ 0.24
CITED1-205ENST00000429794 SNRPA1P09661 255 aaKnown RBP16.55■□□□□ 0.24
CITED1-205ENST00000429794 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
CITED1-205ENST00000429794 ST5P78524 1137 aa16.55■□□□□ 0.24
CITED1-205ENST00000429794 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
CITED1-205ENST00000429794 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
CITED1-205ENST00000429794 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
CITED1-205ENST00000429794 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
CITED1-205ENST00000429794 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms