RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 LRP8Q14114 963 aa6.29□□□□□ -1.4
GYPB-201ENST00000429670 FHDC1Q9C0D6 1143 aaPredicted RBP6.29□□□□□ -1.4
GYPB-201ENST00000429670 ATXN7O15265 892 aaPredicted RBP6.28□□□□□ -1.4
GYPB-201ENST00000429670 TBC1D9Q6ZT07 1266 aa6.28□□□□□ -1.4
GYPB-201ENST00000429670 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
GYPB-201ENST00000429670 PPARGC1BQ86YN6 1023 aaKnown RBP6.28□□□□□ -1.4
GYPB-201ENST00000429670 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
GYPB-201ENST00000429670 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
GYPB-201ENST00000429670 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
GYPB-201ENST00000429670 H2AFB1P0C5Y9 115 aa6.27□□□□□ -1.41
GYPB-201ENST00000429670 H2AFB2P0C5Z0 115 aa6.27□□□□□ -1.41
GYPB-201ENST00000429670 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
GYPB-201ENST00000429670 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
GYPB-201ENST00000429670 HYAL3O43820 417 aaPredicted RBP6.26□□□□□ -1.41
GYPB-201ENST00000429670 TNP2Q05952 138 aa6.26□□□□□ -1.41
GYPB-201ENST00000429670 TMEM259Q4ZIN3 620 aa6.26□□□□□ -1.41
GYPB-201ENST00000429670 DDRGK1Q96HY6 314 aa6.26□□□□□ -1.41
GYPB-201ENST00000429670 SLC24A3Q9HC58 644 aa6.26□□□□□ -1.41
GYPB-201ENST00000429670 MAPTP10636 758 aaKnown RBP6.25□□□□□ -1.41
GYPB-201ENST00000429670 NR1H3Q13133 447 aa6.25□□□□□ -1.41
GYPB-201ENST00000429670 DNAAF2Q9NVR5 837 aaKnown RBP6.25□□□□□ -1.41
GYPB-201ENST00000429670 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
GYPB-201ENST00000429670 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
GYPB-201ENST00000429670 RFC5P40937 340 aa6.24□□□□□ -1.41
GYPB-201ENST00000429670 PCBP4P57723 403 aaKnown RBP6.24□□□□□ -1.41
GYPB-201ENST00000429670 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
GYPB-201ENST00000429670 ZNF468Q5VIY5 522 aaPredicted RBP6.24□□□□□ -1.41
GYPB-201ENST00000429670 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
GYPB-201ENST00000429670 C9orf172C9J069 976 aa6.23□□□□□ -1.41
GYPB-201ENST00000429670 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
GYPB-201ENST00000429670 CD33P20138 364 aa6.23□□□□□ -1.41
GYPB-201ENST00000429670 TXKP42681 527 aa6.23□□□□□ -1.41
GYPB-201ENST00000429670 AIDAQ96BJ3 306 aa6.23□□□□□ -1.41
GYPB-201ENST00000429670 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 PLA2G4AP47712 749 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 USP4Q13107 963 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 LAMC2Q13753 1193 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
GYPB-201ENST00000429670 ERICH6Q7L0X2 663 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 NIFKQ9BYG3 293 aaKnown RBP6.22□□□□□ -1.41
GYPB-201ENST00000429670 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 MARK1Q9P0L2 795 aa6.22□□□□□ -1.41
GYPB-201ENST00000429670 DCDC2BA2VCK2 349 aa6.21□□□□□ -1.42
GYPB-201ENST00000429670 PAX4O43316 350 aa6.21□□□□□ -1.42
GYPB-201ENST00000429670 TLR1Q15399 786 aa6.21□□□□□ -1.42
GYPB-201ENST00000429670 GJA3Q9Y6H8 435 aa6.21□□□□□ -1.42
GYPB-201ENST00000429670 FAM157BP0CG42 384 aa6.2□□□□□ -1.42
GYPB-201ENST00000429670 SIRT1Q96EB6 747 aa6.2□□□□□ -1.42
GYPB-201ENST00000429670 COBLO75128 1261 aa6.19□□□□□ -1.42
GYPB-201ENST00000429670 YBX3P16989 372 aaKnown RBP eCLIP6.19□□□□□ -1.426e-7■■■□□ 14.8
GYPB-201ENST00000429670 TATP17735 454 aaPredicted RBP6.19□□□□□ -1.42
GYPB-201ENST00000429670 NBPF1Q3BBV0 1214 aa6.19□□□□□ -1.42
GYPB-201ENST00000429670 CDCA7Q9BWT1 371 aaPredicted RBP6.19□□□□□ -1.42
GYPB-201ENST00000429670 CEP126Q9P2H0 1117 aa6.19□□□□□ -1.42
GYPB-201ENST00000429670 ADARB2-AS1A8MUL3 147 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 M0R082 166 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 SIN3BO75182 1162 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 ATP4AP20648 1035 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 NRG1Q02297 640 aaPredicted RBP6.18□□□□□ -1.42
GYPB-201ENST00000429670 GRIK4Q16099 956 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 TMEM132AQ24JP5 1023 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 MCTP1Q6DN14 999 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 ZNF417Q8TAU3 575 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 ZNF587Q96SQ5 575 aaPredicted RBP6.18□□□□□ -1.42
GYPB-201ENST00000429670 ETNK1Q9HBU6 452 aa6.18□□□□□ -1.42
GYPB-201ENST00000429670 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 ELNP15502 786 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 ADGRE1Q14246 886 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 SAMD5Q5TGI4 173 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 SYT9Q86SS6 491 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 GJD4Q96KN9 370 aaPredicted RBP6.17□□□□□ -1.42
GYPB-201ENST00000429670 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
GYPB-201ENST00000429670 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 FAM117AQ9C073 453 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 ZDHHC3Q9NYG2 299 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 HCN2Q9UL51 889 aa6.17□□□□□ -1.42
GYPB-201ENST00000429670 COL9A3Q14050 684 aaPredicted RBP6.16□□□□□ -1.42
GYPB-201ENST00000429670 TRAPPC3LQ5T215 181 aa6.16□□□□□ -1.42
GYPB-201ENST00000429670 TXNRD3Q86VQ6 643 aa6.16□□□□□ -1.42
GYPB-201ENST00000429670 MICALL1Q8N3F8 863 aa6.16□□□□□ -1.42
GYPB-201ENST00000429670 MDFIQ99750 246 aa6.16□□□□□ -1.42
GYPB-201ENST00000429670 COL17A1Q9UMD9 1497 aaPredicted RBP6.15□□□□□ -1.42
GYPB-201ENST00000429670 SMTNP53814 917 aa6.15□□□□□ -1.42
GYPB-201ENST00000429670 KDM4CQ9H3R0 1056 aa6.15□□□□□ -1.42
GYPB-201ENST00000429670 EFSO43281 561 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 INHAP05111 366 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 NEUROD1Q13562 356 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 MBTPS1Q14703 1052 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 TNFRSF25Q93038 417 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 TP53INP1Q96A56 240 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 LENG1Q96BZ8 264 aaPredicted RBP6.14□□□□□ -1.43
GYPB-201ENST00000429670 PCMTD1Q96MG8 357 aaPredicted RBP6.14□□□□□ -1.43
GYPB-201ENST00000429670 RNF112Q9ULX5 631 aa6.14□□□□□ -1.43
GYPB-201ENST00000429670 CDK2AP1O14519 115 aa6.13□□□□□ -1.43
GYPB-201ENST00000429670 NID1P14543 1247 aa6.13□□□□□ -1.43
GYPB-201ENST00000429670 BICDL1Q6ZP65 573 aa6.13□□□□□ -1.43
GYPB-201ENST00000429670 GOPCQ9HD26 462 aa6.13□□□□□ -1.43
GYPB-201ENST00000429670 STRN4Q9NRL3 753 aa6.13□□□□□ -1.43
GYPB-201ENST00000429670 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
GYPB-201ENST00000429670 GDF10P55107 478 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms