RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 KCNQ3O43525 872 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 STAP2Q9UGK3 403 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 POLA2Q14181 598 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 RAPGEF4Q8WZA2 1011 aa16.8■□□□□ 0.28
THBS3-202ENST00000428962 PI4KAP2A4QPH2 592 aa16.79■□□□□ 0.28
THBS3-202ENST00000428962 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
THBS3-202ENST00000428962 PI4KAP1Q8N8J0 262 aa16.79■□□□□ 0.28
THBS3-202ENST00000428962 NPHP3Q7Z494 1330 aa16.79■□□□□ 0.28
THBS3-202ENST00000428962 ADCY9O60503 1353 aa16.79■□□□□ 0.28
THBS3-202ENST00000428962 ST18O60284 1047 aa16.78■□□□□ 0.28
THBS3-202ENST00000428962 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
THBS3-202ENST00000428962 ALDH1L1O75891 902 aa16.78■□□□□ 0.28
THBS3-202ENST00000428962 PTMSP20962 102 aa16.78■□□□□ 0.28
THBS3-202ENST00000428962 GBP4Q96PP9 640 aa16.78■□□□□ 0.28
THBS3-202ENST00000428962 TNS3Q68CZ2 1445 aa16.78■□□□□ 0.28
THBS3-202ENST00000428962 CD2BP2O95400 341 aaKnown RBP16.77■□□□□ 0.28
THBS3-202ENST00000428962 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.28
THBS3-202ENST00000428962 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.28
THBS3-202ENST00000428962 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
THBS3-202ENST00000428962 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
THBS3-202ENST00000428962 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.27
THBS3-202ENST00000428962 MCCP23508 829 aa16.77■□□□□ 0.27
THBS3-202ENST00000428962 ZC3H6P61129 1189 aaKnown RBP16.77■□□□□ 0.27
THBS3-202ENST00000428962 SPG7Q9UQ90 795 aa16.77■□□□□ 0.27
THBS3-202ENST00000428962 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
THBS3-202ENST00000428962 KIF1BPQ96EK5 621 aa16.76■□□□□ 0.27
THBS3-202ENST00000428962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.27
THBS3-202ENST00000428962 CRYBG1Q9Y4K1 1723 aa16.76■□□□□ 0.27
THBS3-202ENST00000428962 SRGAP3O43295 1099 aa16.75■□□□□ 0.27
THBS3-202ENST00000428962 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
THBS3-202ENST00000428962 DDX58O95786 925 aaKnown RBP16.75■□□□□ 0.27
THBS3-202ENST00000428962 KSR2Q6VAB6 950 aa16.75■□□□□ 0.27
THBS3-202ENST00000428962 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
THBS3-202ENST00000428962 COL18A1P39060 1754 aa16.75■□□□□ 0.27
THBS3-202ENST00000428962 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
THBS3-202ENST00000428962 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
THBS3-202ENST00000428962 ESYT1Q9BSJ8 1104 aa16.75■□□□□ 0.27
THBS3-202ENST00000428962 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
THBS3-202ENST00000428962 NBPF7P0C2Y1 421 aaPredicted RBP16.74■□□□□ 0.27
THBS3-202ENST00000428962 MTX1Q13505 466 aa16.74■□□□□ 0.27
THBS3-202ENST00000428962 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
THBS3-202ENST00000428962 TNPO1Q92973 898 aaKnown RBP16.74■□□□□ 0.27
THBS3-202ENST00000428962 EPB41L2O43491 1005 aaKnown RBP16.73■□□□□ 0.27
THBS3-202ENST00000428962 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
THBS3-202ENST00000428962 MAP3K2Q9Y2U5 619 aa16.73■□□□□ 0.27
THBS3-202ENST00000428962 ANXA1P04083 346 aa16.73■□□□□ 0.27
THBS3-202ENST00000428962 TSHZ3Q63HK5 1081 aa16.73■□□□□ 0.27
THBS3-202ENST00000428962 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
THBS3-202ENST00000428962 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
THBS3-202ENST00000428962 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
THBS3-202ENST00000428962 MRC1P22897 1456 aa16.72■□□□□ 0.27
THBS3-202ENST00000428962 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
THBS3-202ENST00000428962 TRAK2O60296 914 aa16.72■□□□□ 0.27
THBS3-202ENST00000428962 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
THBS3-202ENST00000428962 CHMLP26374 656 aa16.72■□□□□ 0.27
THBS3-202ENST00000428962 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
THBS3-202ENST00000428962 PKD1L3Q7Z443 1732 aa16.72■□□□□ 0.27
THBS3-202ENST00000428962 CPDO75976 1380 aa16.71■□□□□ 0.27
THBS3-202ENST00000428962 PHKG2P15735 406 aa16.71■□□□□ 0.27
THBS3-202ENST00000428962 ANAPC15P60006 121 aa16.71■□□□□ 0.27
THBS3-202ENST00000428962 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
THBS3-202ENST00000428962 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
THBS3-202ENST00000428962 MEGF6O75095 1541 aa16.71■□□□□ 0.27
THBS3-202ENST00000428962 MCM2P49736 904 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 ZNF790Q6PG37 636 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 LINS1Q8NG48 757 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
THBS3-202ENST00000428962 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 GOLGA6L22H0YM25 854 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 NUCB2P80303 420 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 OS9Q13438 667 aaPredicted RBP16.7■□□□□ 0.26
THBS3-202ENST00000428962 PROSER3Q2NL68 480 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
THBS3-202ENST00000428962 C5P01031 1676 aa16.69■□□□□ 0.26
THBS3-202ENST00000428962 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
THBS3-202ENST00000428962 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
THBS3-202ENST00000428962 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
THBS3-202ENST00000428962 SKOR2Q2VWA4 1001 aaPredicted RBP16.69■□□□□ 0.26
THBS3-202ENST00000428962 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
THBS3-202ENST00000428962 PARP4Q9UKK3 1724 aaKnown RBP16.68■□□□□ 0.26
THBS3-202ENST00000428962 CLEC17AQ6ZS10 378 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 CNTROBQ8N137 903 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 DCAF5Q96JK2 942 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 ANO2Q9NQ90 1003 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 UTYO14607 1347 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
THBS3-202ENST00000428962 GRM8O00222 908 aa16.67■□□□□ 0.26
THBS3-202ENST00000428962 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
THBS3-202ENST00000428962 CLASRPQ8N2M8 674 aaKnown RBP16.67■□□□□ 0.26
THBS3-202ENST00000428962 PI4K2BQ8TCG2 481 aa16.67■□□□□ 0.26
THBS3-202ENST00000428962 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
THBS3-202ENST00000428962 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
THBS3-202ENST00000428962 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
THBS3-202ENST00000428962 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
THBS3-202ENST00000428962 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms