RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CPLX2Q6PUV4 134 aaKnown RBP8.91□□□□□ -0.98
CNOT4-206ENST00000428680 ANKRD26Q9UPS8 1709 aa8.91□□□□□ -0.98
CNOT4-206ENST00000428680 PHF14O94880 888 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 WWC3Q9ULE0 1092 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 GTF3C3Q9Y5Q9 886 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 KIF20BQ96Q89 1820 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-206ENST00000428680 IFIT2P09913 472 aaKnown RBP8.9□□□□□ -0.98
CNOT4-206ENST00000428680 SSFA2P28290 1259 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 CHRNA2Q15822 529 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 B4GALNT3Q6L9W6 998 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 DEFB132Q7Z7B7 95 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 TRDNQ13061 729 aa8.9□□□□□ -0.98
CNOT4-206ENST00000428680 RWDD1Q9H446 243 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-206ENST00000428680 CHAF1AQ13111 956 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-206ENST00000428680 RPGRQ92834 1020 aaKnown RBP8.89□□□□□ -0.99
CNOT4-206ENST00000428680 ATP2B2Q01814 1243 aa8.89□□□□□ -0.99
CNOT4-206ENST00000428680 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
CNOT4-206ENST00000428680 TEX13AQ9BXU3 409 aaPredicted RBP8.89□□□□□ -0.99
CNOT4-206ENST00000428680 NRDCO43847 1150 aa8.89□□□□□ -0.99
CNOT4-206ENST00000428680 WDR78Q5VTH9 848 aa8.89□□□□□ -0.99
CNOT4-206ENST00000428680 GNAI1P63096 354 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 SOGA3Q5TF21 947 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 SULT6B1Q6IMI4 303 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 PNISRQ8TF01 805 aaKnown RBP8.88□□□□□ -0.99
CNOT4-206ENST00000428680 TBC1D2BQ9UPU7 963 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 COL24A1Q17RW2 1714 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
CNOT4-206ENST00000428680 BCL2L13Q9BXK5 485 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 ERVV-2B6SEH9 535 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 SBF2Q86WG5 1849 aa8.88□□□□□ -0.99
CNOT4-206ENST00000428680 ERICH2A1L162 156 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 WWC2Q6AWC2 1192 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 CCDC87Q9NVE4 849 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 MTMR7Q9Y216 660 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 NCAPD2Q15021 1401 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 IFNL2Q8IZJ0 200 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 LTN1O94822 1766 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
CNOT4-206ENST00000428680 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
CNOT4-206ENST00000428680 NLGN1Q8N2Q7 840 aa8.86□□□□□ -0.99
CNOT4-206ENST00000428680 C6orf229H3BNL8 230 aa8.86□□□□□ -0.99
CNOT4-206ENST00000428680 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
CNOT4-206ENST00000428680 PAPPAQ13219 1627 aa8.86□□□□□ -0.99
CNOT4-206ENST00000428680 A0A1W2PP64 1363 aa8.86□□□□□ -0.99
CNOT4-206ENST00000428680 TGFB2P61812 414 aa8.86□□□□□ -0.99
CNOT4-206ENST00000428680 C10orf71Q711Q0 1435 aa8.86□□□□□ -0.99
CNOT4-206ENST00000428680 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 HOXC9P31274 260 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 IGHMBP2P38935 993 aaKnown RBP8.85□□□□□ -0.99
CNOT4-206ENST00000428680 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-206ENST00000428680 HSP90AB4PQ58FF6 505 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 CHMP4CQ96CF2 233 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-206ENST00000428680 MYL6BP14649 208 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 NF2P35240 595 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 KIAA2012Q0VF49 1180 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 TMEM87AQ8NBN3 555 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 JDP2Q8WYK2 163 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 DIAPH3Q9NSV4 1193 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 GIGYF1O75420 1035 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-206ENST00000428680 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 MIER1Q8N108 512 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 RILPL2Q969X0 211 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 ACSBG1Q96GR2 724 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 CEP89Q96ST8 783 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 ANKIB1Q9P2G1 1089 aa8.85□□□□□ -0.99
CNOT4-206ENST00000428680 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
CNOT4-206ENST00000428680 CCDC30Q5VVM6 783 aa8.84□□□□□ -0.99
CNOT4-206ENST00000428680 SLC12A5Q9H2X9 1139 aa8.84□□□□□ -0.99
CNOT4-206ENST00000428680 NBPF1Q3BBV0 1214 aa8.84□□□□□ -0.99
CNOT4-206ENST00000428680 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-206ENST00000428680 CCDC57Q2TAC2 916 aa8.84□□□□□ -0.99
CNOT4-206ENST00000428680 MARCH10Q8NA82 808 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-206ENST00000428680 NPC1L1Q9UHC9 1359 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
CNOT4-206ENST00000428680 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 CICQ96RK0 1608 aaPredicted RBP8.83□□□□□ -1
CNOT4-206ENST00000428680 PKD1L3Q7Z443 1732 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 C5P01031 1676 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 PTMAP06454 111 aaKnown RBP8.83□□□□□ -1
CNOT4-206ENST00000428680 NFXL1Q6ZNB6 911 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
CNOT4-206ENST00000428680 ST5P78524 1137 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 DCAF5Q96JK2 942 aa8.83□□□□□ -1
CNOT4-206ENST00000428680 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
CNOT4-206ENST00000428680 LY75O60449 1722 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 PRKAR2BP31323 418 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 AKT1S1Q96B36 256 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 CNTNAP4Q9C0A0 1308 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 APAF1O14727 1248 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 CPLX1O14810 134 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 PAF1Q8N7H5 531 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 RUFY2Q8WXA3 655 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 BTBD11A6QL63 1104 aa8.82□□□□□ -1
CNOT4-206ENST00000428680 MPHOSPH10O00566 681 aaKnown RBP8.82□□□□□ -1
CNOT4-206ENST00000428680 RRS1Q15050 365 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms