RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PABPN1LA6NDY0 278 aaKnown RBP10.44□□□□□ -0.74
CTNND1-208ENST00000428599 WDR62O43379 1518 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 ACEP12821 1306 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 HSP90AB3PQ58FF7 597 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 METTL24Q5JXM2 366 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 DUSP27Q5VZP5 1158 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-208ENST00000428599 SMTNL1A8MU46 457 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-208ENST00000428599 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
CTNND1-208ENST00000428599 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 PDRG1Q9NUG6 133 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 LRRFIP2Q9Y608 721 aaKnown RBP10.44□□□□□ -0.74
CTNND1-208ENST00000428599 MSH6P52701 1360 aa10.44□□□□□ -0.74
CTNND1-208ENST00000428599 IFIT1P09914 478 aaKnown RBP10.43□□□□□ -0.74
CTNND1-208ENST00000428599 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 RPGRQ92834 1020 aaKnown RBP10.43□□□□□ -0.74
CTNND1-208ENST00000428599 SRGAP3O43295 1099 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 DZIP1Q86YF9 867 aaKnown RBP10.43□□□□□ -0.74
CTNND1-208ENST00000428599 MPHOSPH6Q99547 160 aaKnown RBP10.43□□□□□ -0.74
CTNND1-208ENST00000428599 COMMD10Q9Y6G5 202 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 VPS36Q86VN1 386 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 SPATA32Q96LK8 384 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 CCDC85AQ96PX6 553 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-208ENST00000428599 RAB34Q9BZG1 259 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 NFKBIBQ15653 356 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 CCDC96Q2M329 555 aa10.43□□□□□ -0.74
CTNND1-208ENST00000428599 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 TAF7Q15545 349 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-208ENST00000428599 FERMT2Q96AC1 680 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 CCDC148Q8NFR7 591 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 RIMS2Q9UQ26 1411 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
CTNND1-208ENST00000428599 TMEM266Q2M3C6 531 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 KIF20AO95235 890 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 FAM193AP78312 1265 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 FKBP15Q5T1M5 1219 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 DISP3Q9P2K9 1392 aa10.42□□□□□ -0.74
CTNND1-208ENST00000428599 PTPRKQ15262 1439 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 TRAK2O60296 914 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 ABCC2Q92887 1545 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 EXOC5O00471 708 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 ZNF444Q8N0Y2 327 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-208ENST00000428599 PHAXQ9H814 394 aaKnown RBP10.41□□□□□ -0.74
CTNND1-208ENST00000428599 SPA17Q15506 151 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
CTNND1-208ENST00000428599 UPF3BQ9BZI7 483 aaKnown RBP10.41□□□□□ -0.74
CTNND1-208ENST00000428599 UBA5Q9GZZ9 404 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 CHRNA2Q15822 529 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 HOOK3Q86VS8 718 aa10.41□□□□□ -0.74
CTNND1-208ENST00000428599 FAM177A1Q8N128 213 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-208ENST00000428599 CCDC196A0A1B0GTZ2 297 aa10.4□□□□□ -0.74
CTNND1-208ENST00000428599 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.74
CTNND1-208ENST00000428599 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.74
CTNND1-208ENST00000428599 CTCFLQ8NI51 663 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-208ENST00000428599 NSD2O96028 1365 aa10.4□□□□□ -0.74
CTNND1-208ENST00000428599 ARHGAP29Q52LW3 1261 aa10.4□□□□□ -0.75
CTNND1-208ENST00000428599 FEZ1Q99689 392 aa10.4□□□□□ -0.75
CTNND1-208ENST00000428599 BAG4O95429 457 aaKnown RBP10.39□□□□□ -0.75
CTNND1-208ENST00000428599 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 DYDC1Q8WWB3 177 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 CA8P35219 290 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 NF2P35240 595 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 LARP1Q6PKG0 1096 aaKnown RBP10.39□□□□□ -0.75
CTNND1-208ENST00000428599 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
CTNND1-208ENST00000428599 ANKRD24Q8TF21 1146 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 PPM1EQ8WY54 764 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 FERMT1Q9BQL6 677 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 SSX2IPQ9Y2D8 614 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 GOLGA6L10A0A0M3HER8 536 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 SLC5A1P13866 664 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 MAP2K1Q02750 393 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-208ENST00000428599 CACNA2D4Q7Z3S7 1137 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 TMEM57Q8N5G2 664 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 IL1RAPL2Q9NP60 686 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-208ENST00000428599 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 CETN1Q12798 172 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 MAP3K12Q12852 859 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 MYD88Q99836 296 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 NUP160Q12769 1436 aa10.39□□□□□ -0.75
CTNND1-208ENST00000428599 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 UBAP1LF5GYI3 381 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 CTNNA2P26232 953 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 TAF3Q5VWG9 929 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 LIG1P18858 919 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 NAPBQ9H115 298 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 NUP62CLQ9H1M0 184 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 HSPA2P54652 639 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 CTNNBL1Q8WYA6 563 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-208ENST00000428599 TOM1O60784 492 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 IQCA1Q86XH1 822 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 CABP5Q9NP86 173 aa10.38□□□□□ -0.75
CTNND1-208ENST00000428599 MYO1BO43795 1136 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
CTNND1-208ENST00000428599 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms