RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 ARHGAP27Q6ZUM4 889 aa23.43■■□□□ 1.34
DDR1-235ENST00000428153 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
DDR1-235ENST00000428153 GNAT3A8MTJ3 354 aa23.42■■□□□ 1.34
DDR1-235ENST00000428153 KIF3CO14782 793 aa23.42■■□□□ 1.34
DDR1-235ENST00000428153 STARD3NLO95772 234 aa23.42■■□□□ 1.34
DDR1-235ENST00000428153 DALRD3Q5D0E6 543 aaKnown RBP23.42■■□□□ 1.34
DDR1-235ENST00000428153 ZBTB1Q9Y2K1 713 aa23.42■■□□□ 1.34
DDR1-235ENST00000428153 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
DDR1-235ENST00000428153 HSPA6P17066 643 aa23.41■■□□□ 1.34
DDR1-235ENST00000428153 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
DDR1-235ENST00000428153 NRXN2Q9P2S2 1712 aa23.4■■□□□ 1.34
DDR1-235ENST00000428153 TEFQ10587 303 aa23.4■■□□□ 1.34
DDR1-235ENST00000428153 ZNF790Q6PG37 636 aa23.39■■□□□ 1.33
DDR1-235ENST00000428153 IL17REQ8NFR9 667 aa23.39■■□□□ 1.33
DDR1-235ENST00000428153 CFAP53Q96M91 514 aa23.39■■□□□ 1.33
DDR1-235ENST00000428153 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
DDR1-235ENST00000428153 SIPA1L3O60292 1781 aaPredicted RBP23.38■■□□□ 1.33
DDR1-235ENST00000428153 A0A087WZG4 1122 aa23.38■■□□□ 1.33
DDR1-235ENST00000428153 NFIXQ14938 502 aa23.38■■□□□ 1.33
DDR1-235ENST00000428153 HEG1Q9ULI3 1381 aa23.38■■□□□ 1.33
DDR1-235ENST00000428153 EIF5P55010 431 aaKnown RBP23.37■■□□□ 1.33
DDR1-235ENST00000428153 BCL2L12Q9HB09 334 aa23.36■■□□□ 1.33
DDR1-235ENST00000428153 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
DDR1-235ENST00000428153 AFDNP55196 1824 aaKnown RBP23.36■■□□□ 1.33
DDR1-235ENST00000428153 ZNF496Q96IT1 587 aaPredicted RBP23.35■■□□□ 1.33
DDR1-235ENST00000428153 TOMM70O94826 608 aa23.34■■□□□ 1.33
DDR1-235ENST00000428153 SERPINB2P05120 415 aa23.34■■□□□ 1.33
DDR1-235ENST00000428153 CHRNA5P30532 468 aa23.34■■□□□ 1.33
DDR1-235ENST00000428153 C9orf131Q5VYM1 1079 aa23.34■■□□□ 1.33
DDR1-235ENST00000428153 RSPH6AQ9H0K4 717 aa23.34■■□□□ 1.33
DDR1-235ENST00000428153 CANXP27824 592 aaKnown RBP23.33■■□□□ 1.33
DDR1-235ENST00000428153 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
DDR1-235ENST00000428153 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
DDR1-235ENST00000428153 PDZRN3Q9UPQ7 1066 aa23.32■■□□□ 1.32
DDR1-235ENST00000428153 DLEC1Q9Y238 1755 aa23.32■■□□□ 1.32
DDR1-235ENST00000428153 ZC3H4Q9UPT8 1303 aaKnown RBP23.32■■□□□ 1.32
DDR1-235ENST00000428153 PRKAR2BP31323 418 aa23.31■■□□□ 1.32
DDR1-235ENST00000428153 PHACTR3Q96KR7 559 aa23.3■■□□□ 1.32
DDR1-235ENST00000428153 SCN7AQ01118 1682 aa23.29■■□□□ 1.32
DDR1-235ENST00000428153 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
DDR1-235ENST00000428153 KDM2BQ8NHM5 1336 aa23.29■■□□□ 1.32
DDR1-235ENST00000428153 SBF1O95248 1867 aa23.28■■□□□ 1.32
DDR1-235ENST00000428153 TTLL6Q8N841 843 aa23.28■■□□□ 1.32
DDR1-235ENST00000428153 RNF181Q9P0P0 153 aa23.28■■□□□ 1.32
DDR1-235ENST00000428153 BTBD11A6QL63 1104 aa23.27■■□□□ 1.32
DDR1-235ENST00000428153 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
DDR1-235ENST00000428153 APLP1P51693 650 aa23.27■■□□□ 1.32
DDR1-235ENST00000428153 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
DDR1-235ENST00000428153 NMRK2Q9NPI5 230 aa23.27■■□□□ 1.32
DDR1-235ENST00000428153 H0YIN7 160 aa23.26■■□□□ 1.31
DDR1-235ENST00000428153 HTATSF1O43719 755 aaKnown RBP23.26■■□□□ 1.31
DDR1-235ENST00000428153 RBM46Q8TBY0 533 aaKnown RBP23.26■■□□□ 1.31
DDR1-235ENST00000428153 CARMIL3Q8ND23 1372 aa23.26■■□□□ 1.31
DDR1-235ENST00000428153 U2AF1L5P0DN76 240 aaPredicted RBP23.25■■□□□ 1.31
DDR1-235ENST00000428153 U2AF1Q01081 240 aaKnown RBP eCLIP23.25■■□□□ 1.31
DDR1-235ENST00000428153 RTF1Q92541 710 aaKnown RBP23.25■■□□□ 1.31
DDR1-235ENST00000428153 TBC1D9BQ66K14 1250 aa23.24■■□□□ 1.31
DDR1-235ENST00000428153 C2CD5Q86YS7 1000 aa23.24■■□□□ 1.31
DDR1-235ENST00000428153 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
DDR1-235ENST00000428153 LMNB1P20700 586 aa23.23■■□□□ 1.31
DDR1-235ENST00000428153 PDE6BP35913 854 aa23.23■■□□□ 1.31
DDR1-235ENST00000428153 TNRC6CQ9HCJ0 1690 aaKnown RBP23.22■■□□□ 1.31
DDR1-235ENST00000428153 RGL2O15211 777 aa23.22■■□□□ 1.31
DDR1-235ENST00000428153 A1BGP04217 495 aa23.22■■□□□ 1.31
DDR1-235ENST00000428153 BICDL1Q6ZP65 573 aa23.22■■□□□ 1.31
DDR1-235ENST00000428153 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
DDR1-235ENST00000428153 TBC1D2BQ9UPU7 963 aa23.22■■□□□ 1.31
DDR1-235ENST00000428153 CAMTA2O94983 1202 aa23.21■■□□□ 1.31
DDR1-235ENST00000428153 FSTL1Q12841 308 aa23.21■■□□□ 1.31
DDR1-235ENST00000428153 CLEC4GQ6UXB4 293 aa23.21■■□□□ 1.31
DDR1-235ENST00000428153 KCNQ3O43525 872 aa23.2■■□□□ 1.3
DDR1-235ENST00000428153 SNRPA1P09661 255 aaKnown RBP23.2■■□□□ 1.3
DDR1-235ENST00000428153 PRR5LQ6MZQ0 368 aa23.2■■□□□ 1.3
DDR1-235ENST00000428153 SETDB2Q96T68 719 aa23.2■■□□□ 1.3
DDR1-235ENST00000428153 ZNF330Q9Y3S2 320 aaPredicted RBP23.2■■□□□ 1.3
DDR1-235ENST00000428153 ANKRD31Q8N7Z5 1873 aa23.19■■□□□ 1.3
DDR1-235ENST00000428153 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
DDR1-235ENST00000428153 DZIP3Q86Y13 1208 aaKnown RBP23.19■■□□□ 1.3
DDR1-235ENST00000428153 USP16Q9Y5T5 823 aa23.19■■□□□ 1.3
DDR1-235ENST00000428153 RASSF7Q02833 373 aa23.17■■□□□ 1.3
DDR1-235ENST00000428153 MCM10Q7L590 875 aa23.17■■□□□ 1.3
DDR1-235ENST00000428153 CNBD1Q8NA66 436 aa23.17■■□□□ 1.3
DDR1-235ENST00000428153 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
DDR1-235ENST00000428153 NFKBIEO00221 500 aa23.16■■□□□ 1.3
DDR1-235ENST00000428153 ZNF652Q9Y2D9 606 aa23.16■■□□□ 1.3
DDR1-235ENST00000428153 NEFMP07197 916 aa23.15■■□□□ 1.3
DDR1-235ENST00000428153 ST5P78524 1137 aa23.15■■□□□ 1.3
DDR1-235ENST00000428153 TAF7Q15545 349 aaPredicted RBP23.15■■□□□ 1.3
DDR1-235ENST00000428153 RRAGCQ9HB90 399 aa23.15■■□□□ 1.3
DDR1-235ENST00000428153 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
DDR1-235ENST00000428153 STYK1Q6J9G0 422 aa23.14■■□□□ 1.29
DDR1-235ENST00000428153 DNAJC5GQ8N7S2 189 aa23.14■■□□□ 1.29
DDR1-235ENST00000428153 CNKSR1Q969H4 720 aa23.14■■□□□ 1.29
DDR1-235ENST00000428153 ZNF622Q969S3 477 aaKnown RBP eCLIP23.14■■□□□ 1.29
DDR1-235ENST00000428153 COL11A2P13942 1736 aaPredicted RBP23.13■■□□□ 1.29
DDR1-235ENST00000428153 PRELPP51888 382 aa23.13■■□□□ 1.29
DDR1-235ENST00000428153 NPHP1O15259 732 aa23.12■■□□□ 1.29
DDR1-235ENST00000428153 SRGNP10124 158 aa23.12■■□□□ 1.29
DDR1-235ENST00000428153 FER1L6Q2WGJ9 1857 aa23.12■■□□□ 1.29
DDR1-235ENST00000428153 SOGA3Q5TF21 947 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms