RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 MRC1P22897 1456 aa12.32□□□□□ -0.44
RFX3-AS1-202ENST00000427722 ITGB4P16144 1822 aa12.32□□□□□ -0.44
RFX3-AS1-202ENST00000427722 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
RFX3-AS1-202ENST00000427722 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
RFX3-AS1-202ENST00000427722 SSFA2P28290 1259 aa12.3□□□□□ -0.44
RFX3-AS1-202ENST00000427722 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
RFX3-AS1-202ENST00000427722 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
RFX3-AS1-202ENST00000427722 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
RFX3-AS1-202ENST00000427722 RALBP1Q15311 655 aa12.29□□□□□ -0.44
RFX3-AS1-202ENST00000427722 LHX8Q68G74 356 aa12.29□□□□□ -0.44
RFX3-AS1-202ENST00000427722 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
RFX3-AS1-202ENST00000427722 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
RFX3-AS1-202ENST00000427722 TUBGCP6Q96RT7 1819 aa12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 FCHSD2O94868 740 aa12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 RTCBQ9Y3I0 505 aaKnown RBP12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
RFX3-AS1-202ENST00000427722 TEFQ10587 303 aa12.27□□□□□ -0.45
RFX3-AS1-202ENST00000427722 IL17REQ8NFR9 667 aa12.27□□□□□ -0.45
RFX3-AS1-202ENST00000427722 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
RFX3-AS1-202ENST00000427722 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
RFX3-AS1-202ENST00000427722 CRKLP46109 303 aaKnown RBP12.26□□□□□ -0.45
RFX3-AS1-202ENST00000427722 GSE1Q14687 1217 aa12.26□□□□□ -0.45
RFX3-AS1-202ENST00000427722 DNAJC10Q8IXB1 793 aa12.26□□□□□ -0.45
RFX3-AS1-202ENST00000427722 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
RFX3-AS1-202ENST00000427722 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
RFX3-AS1-202ENST00000427722 NEFMP07197 916 aa12.25□□□□□ -0.45
RFX3-AS1-202ENST00000427722 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
RFX3-AS1-202ENST00000427722 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
RFX3-AS1-202ENST00000427722 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
RFX3-AS1-202ENST00000427722 RPS6KA4O75676 772 aa12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 PYGBP11216 843 aa12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 MCM10Q7L590 875 aa12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 SCN11AQ9UI33 1791 aa12.24□□□□□ -0.45
RFX3-AS1-202ENST00000427722 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
RFX3-AS1-202ENST00000427722 RFC4P35249 363 aa12.23□□□□□ -0.45
RFX3-AS1-202ENST00000427722 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
RFX3-AS1-202ENST00000427722 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
RFX3-AS1-202ENST00000427722 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 MMP10P09238 476 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 TIE1P35590 1138 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ZNF790Q6PG37 636 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ZNF496Q96IT1 587 aaPredicted RBP12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 TJP1Q07157 1748 aa12.22□□□□□ -0.45
RFX3-AS1-202ENST00000427722 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 KCNQ3O43525 872 aa12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 CYP19A1P11511 503 aaPredicted RBP12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 SRP68Q9UHB9 627 aaKnown RBP12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
RFX3-AS1-202ENST00000427722 COL5A3P25940 1745 aaPredicted RBP12.2□□□□□ -0.46
RFX3-AS1-202ENST00000427722 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
RFX3-AS1-202ENST00000427722 CICQ96RK0 1608 aaPredicted RBP12.2□□□□□ -0.46
RFX3-AS1-202ENST00000427722 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
RFX3-AS1-202ENST00000427722 FMNL2Q96PY5 1086 aa12.2□□□□□ -0.46
RFX3-AS1-202ENST00000427722 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
RFX3-AS1-202ENST00000427722 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 STARD3NLO95772 234 aa12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 GYS1P13807 737 aa12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
RFX3-AS1-202ENST00000427722 COL15A1P39059 1388 aa12.18□□□□□ -0.46
RFX3-AS1-202ENST00000427722 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
RFX3-AS1-202ENST00000427722 GPR162Q16538 588 aa12.18□□□□□ -0.46
RFX3-AS1-202ENST00000427722 CCDC146Q8IYE0 955 aa12.18□□□□□ -0.46
RFX3-AS1-202ENST00000427722 NLGN1Q8N2Q7 840 aa12.18□□□□□ -0.46
RFX3-AS1-202ENST00000427722 C7P10643 843 aa12.17□□□□□ -0.46
RFX3-AS1-202ENST00000427722 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
RFX3-AS1-202ENST00000427722 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
RFX3-AS1-202ENST00000427722 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
RFX3-AS1-202ENST00000427722 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 ZPR1O75312 459 aa12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 YY1P25490 414 aa12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
RFX3-AS1-202ENST00000427722 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms