RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
APOBEC3D-202ENST00000427494 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
APOBEC3D-202ENST00000427494 SLC39A6Q13433 755 aa17.29■□□□□ 0.36
APOBEC3D-202ENST00000427494 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
APOBEC3D-202ENST00000427494 PDE1AP54750 535 aa17.29■□□□□ 0.36
APOBEC3D-202ENST00000427494 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
APOBEC3D-202ENST00000427494 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
APOBEC3D-202ENST00000427494 MRC1P22897 1456 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 SOS2Q07890 1332 aaPredicted RBP17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 PRDM11Q9NQV5 511 aa17.28■□□□□ 0.36
APOBEC3D-202ENST00000427494 ABCA3Q99758 1704 aa17.27■□□□□ 0.36
APOBEC3D-202ENST00000427494 CYP27B1O15528 508 aa17.27■□□□□ 0.36
APOBEC3D-202ENST00000427494 KSR2Q6VAB6 950 aa17.27■□□□□ 0.36
APOBEC3D-202ENST00000427494 DCAF5Q96JK2 942 aa17.27■□□□□ 0.36
APOBEC3D-202ENST00000427494 PARP4Q9UKK3 1724 aaKnown RBP17.27■□□□□ 0.35
APOBEC3D-202ENST00000427494 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 SALL3Q9BXA9 1300 aa17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 POLA2Q14181 598 aa17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 SNX21Q969T3 373 aa17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 KIF2CQ99661 725 aa17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 DDX21Q9NR30 783 aaKnown RBP eCLIP17.26■□□□□ 0.35
APOBEC3D-202ENST00000427494 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
APOBEC3D-202ENST00000427494 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
APOBEC3D-202ENST00000427494 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
APOBEC3D-202ENST00000427494 MX1P20591 662 aa17.25■□□□□ 0.35
APOBEC3D-202ENST00000427494 TSHZ3Q63HK5 1081 aa17.24■□□□□ 0.35
APOBEC3D-202ENST00000427494 WDR17Q8IZU2 1322 aa17.24■□□□□ 0.35
APOBEC3D-202ENST00000427494 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
APOBEC3D-202ENST00000427494 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
APOBEC3D-202ENST00000427494 TTC5Q8N0Z6 440 aa17.24■□□□□ 0.35
APOBEC3D-202ENST00000427494 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 AIMP1Q12904 312 aaKnown RBP17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 PDIA6Q15084 440 aa17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 COL5A2P05997 1499 aaPredicted RBP17.23■□□□□ 0.35
APOBEC3D-202ENST00000427494 CABP4P57796 275 aa17.22■□□□□ 0.35
APOBEC3D-202ENST00000427494 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
APOBEC3D-202ENST00000427494 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
APOBEC3D-202ENST00000427494 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
APOBEC3D-202ENST00000427494 MYL6BP14649 208 aa17.21■□□□□ 0.35
APOBEC3D-202ENST00000427494 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
APOBEC3D-202ENST00000427494 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
APOBEC3D-202ENST00000427494 STAP2Q9UGK3 403 aa17.21■□□□□ 0.35
APOBEC3D-202ENST00000427494 LINS1Q8NG48 757 aa17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 AOX1Q06278 1338 aa17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
APOBEC3D-202ENST00000427494 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 ERC2O15083 957 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 RIC3Q7Z5B4 369 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 HDAC5Q9UQL6 1122 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 REC8O95072 547 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 MTX1Q13505 466 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
APOBEC3D-202ENST00000427494 TRIM6-TRIM34B2RNG4 842 aa17.18■□□□□ 0.34
APOBEC3D-202ENST00000427494 GRM8O00222 908 aa17.18■□□□□ 0.34
APOBEC3D-202ENST00000427494 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
APOBEC3D-202ENST00000427494 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
APOBEC3D-202ENST00000427494 GLI3P10071 1580 aa17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 LARP1Q6PKG0 1096 aaKnown RBP17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 RABEP1Q15276 862 aa17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
APOBEC3D-202ENST00000427494 UTYO14607 1347 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 IL2RBP14784 551 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
APOBEC3D-202ENST00000427494 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
APOBEC3D-202ENST00000427494 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
APOBEC3D-202ENST00000427494 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
APOBEC3D-202ENST00000427494 EVA1CP58658 441 aa17.15■□□□□ 0.34
APOBEC3D-202ENST00000427494 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.33
APOBEC3D-202ENST00000427494 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
APOBEC3D-202ENST00000427494 MYD88Q99836 296 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms