RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 NPM2Q86SE8 214 aaKnown RBP13.33□□□□□ -0.28
SLC40A1-204ENST00000427419 ZNF496Q96IT1 587 aaPredicted RBP13.33□□□□□ -0.28
SLC40A1-204ENST00000427419 COL15A1P39059 1388 aa13.32□□□□□ -0.28
SLC40A1-204ENST00000427419 C10orf71Q711Q0 1435 aa13.32□□□□□ -0.28
SLC40A1-204ENST00000427419 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
SLC40A1-204ENST00000427419 NARFQ9UHQ1 456 aa13.32□□□□□ -0.28
SLC40A1-204ENST00000427419 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
SLC40A1-204ENST00000427419 ZBTB1Q9Y2K1 713 aa13.31□□□□□ -0.28
SLC40A1-204ENST00000427419 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
SLC40A1-204ENST00000427419 TAF7Q15545 349 aaPredicted RBP13.3□□□□□ -0.28
SLC40A1-204ENST00000427419 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
SLC40A1-204ENST00000427419 MCM10Q7L590 875 aa13.3□□□□□ -0.28
SLC40A1-204ENST00000427419 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
SLC40A1-204ENST00000427419 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
SLC40A1-204ENST00000427419 SNRPA1P09661 255 aaKnown RBP13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 FKBP8Q14318 412 aa13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
SLC40A1-204ENST00000427419 TM4SF1P30408 202 aa13.28□□□□□ -0.28
SLC40A1-204ENST00000427419 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
SLC40A1-204ENST00000427419 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
SLC40A1-204ENST00000427419 RGL2O15211 777 aa13.26□□□□□ -0.29
SLC40A1-204ENST00000427419 SCN7AQ01118 1682 aa13.26□□□□□ -0.29
SLC40A1-204ENST00000427419 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
SLC40A1-204ENST00000427419 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
SLC40A1-204ENST00000427419 KIAA1551Q9HCM1 1747 aa13.26□□□□□ -0.29
SLC40A1-204ENST00000427419 DDR1Q08345 913 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 NFIXQ14938 502 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 LAMB4A4D0S4 1761 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 NRXN2Q9P2S2 1712 aa13.25□□□□□ -0.29
SLC40A1-204ENST00000427419 KCNQ3O43525 872 aa13.24□□□□□ -0.29
SLC40A1-204ENST00000427419 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
SLC40A1-204ENST00000427419 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
SLC40A1-204ENST00000427419 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
SLC40A1-204ENST00000427419 UTRNP46939 3433 aa13.24□□□□□ -0.29
SLC40A1-204ENST00000427419 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 A1BGP04217 495 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 SERPINB2P05120 415 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 DPEP1P16444 411 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 RIPK4P57078 832 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 BCS1LQ9Y276 419 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
SLC40A1-204ENST00000427419 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
SLC40A1-204ENST00000427419 CARMIL3Q8ND23 1372 aa13.22□□□□□ -0.29
SLC40A1-204ENST00000427419 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
SLC40A1-204ENST00000427419 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
SLC40A1-204ENST00000427419 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
SLC40A1-204ENST00000427419 TMPOP42166 694 aaKnown RBP13.21□□□□□ -0.29
SLC40A1-204ENST00000427419 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
SLC40A1-204ENST00000427419 TBC1D2BQ9UPU7 963 aa13.21□□□□□ -0.29
SLC40A1-204ENST00000427419 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
SLC40A1-204ENST00000427419 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
SLC40A1-204ENST00000427419 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
SLC40A1-204ENST00000427419 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
SLC40A1-204ENST00000427419 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
SLC40A1-204ENST00000427419 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
SLC40A1-204ENST00000427419 NPHP1O15259 732 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 KCNA3P22001 575 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 PDE6BP35913 854 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 ADCY9O60503 1353 aa13.19□□□□□ -0.3
SLC40A1-204ENST00000427419 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 H0YIN7 160 aa13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 ST5P78524 1137 aa13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
SLC40A1-204ENST00000427419 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
SLC40A1-204ENST00000427419 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
SLC40A1-204ENST00000427419 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
SLC40A1-204ENST00000427419 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 CHRNA5P30532 468 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 NBPF15Q8N660 670 aa13.16□□□□□ -0.3
SLC40A1-204ENST00000427419 TTLL6Q8N841 843 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms