RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
SSUH2-206ENST00000427408 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
SSUH2-206ENST00000427408 ZNF790Q6PG37 636 aa18.27■□□□□ 0.52
SSUH2-206ENST00000427408 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
SSUH2-206ENST00000427408 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
SSUH2-206ENST00000427408 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
SSUH2-206ENST00000427408 ADCY9O60503 1353 aa18.27■□□□□ 0.51
SSUH2-206ENST00000427408 FCHSD2O94868 740 aa18.26■□□□□ 0.51
SSUH2-206ENST00000427408 NFIXQ14938 502 aa18.26■□□□□ 0.51
SSUH2-206ENST00000427408 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
SSUH2-206ENST00000427408 STARD3NLO95772 234 aa18.25■□□□□ 0.51
SSUH2-206ENST00000427408 CHRNA5P30532 468 aa18.25■□□□□ 0.51
SSUH2-206ENST00000427408 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
SSUH2-206ENST00000427408 COL15A1P39059 1388 aa18.25■□□□□ 0.51
SSUH2-206ENST00000427408 KIAA1551Q9HCM1 1747 aa18.24■□□□□ 0.51
SSUH2-206ENST00000427408 EIF5P55010 431 aaKnown RBP18.24■□□□□ 0.51
SSUH2-206ENST00000427408 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
SSUH2-206ENST00000427408 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
SSUH2-206ENST00000427408 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
SSUH2-206ENST00000427408 MCM10Q7L590 875 aa18.23■□□□□ 0.51
SSUH2-206ENST00000427408 KIF13BQ9NQT8 1826 aa18.23■□□□□ 0.51
SSUH2-206ENST00000427408 N4BP2Q86UW6 1770 aaPredicted RBP18.22■□□□□ 0.51
SSUH2-206ENST00000427408 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
SSUH2-206ENST00000427408 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
SSUH2-206ENST00000427408 A1BGP04217 495 aa18.21■□□□□ 0.51
SSUH2-206ENST00000427408 DCTN1Q14203 1278 aa18.21■□□□□ 0.51
SSUH2-206ENST00000427408 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
SSUH2-206ENST00000427408 BICDL1Q6ZP65 573 aa18.21■□□□□ 0.51
SSUH2-206ENST00000427408 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
SSUH2-206ENST00000427408 SERPINB2P05120 415 aa18.2■□□□□ 0.5
SSUH2-206ENST00000427408 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
SSUH2-206ENST00000427408 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
SSUH2-206ENST00000427408 A0A087WZG4 1122 aa18.19■□□□□ 0.5
SSUH2-206ENST00000427408 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
SSUH2-206ENST00000427408 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
SSUH2-206ENST00000427408 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
SSUH2-206ENST00000427408 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
SSUH2-206ENST00000427408 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
SSUH2-206ENST00000427408 UBR2Q8IWV8 1755 aa18.17■□□□□ 0.5
SSUH2-206ENST00000427408 PIP4K2AP48426 406 aaPredicted RBP18.17■□□□□ 0.5
SSUH2-206ENST00000427408 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
SSUH2-206ENST00000427408 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
SSUH2-206ENST00000427408 IL6STP40189 918 aaPredicted RBP18.16■□□□□ 0.5
SSUH2-206ENST00000427408 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
SSUH2-206ENST00000427408 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
SSUH2-206ENST00000427408 KIF3CO14782 793 aa18.15■□□□□ 0.5
SSUH2-206ENST00000427408 CCDC24Q8N4L8 307 aa18.15■□□□□ 0.5
SSUH2-206ENST00000427408 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
SSUH2-206ENST00000427408 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
SSUH2-206ENST00000427408 CAMTA2O94983 1202 aa18.14■□□□□ 0.49
SSUH2-206ENST00000427408 C2CD5Q86YS7 1000 aa18.14■□□□□ 0.49
SSUH2-206ENST00000427408 SIPA1L3O60292 1781 aaPredicted RBP18.14■□□□□ 0.49
SSUH2-206ENST00000427408 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
SSUH2-206ENST00000427408 SNRPA1P09661 255 aaKnown RBP18.12■□□□□ 0.49
SSUH2-206ENST00000427408 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
SSUH2-206ENST00000427408 BRCA1P38398 1863 aaKnown RBP18.12■□□□□ 0.49
SSUH2-206ENST00000427408 NBPF26B4DH59 902 aa18.11■□□□□ 0.49
SSUH2-206ENST00000427408 NBPF10Q6P3W6 841 aaKnown RBP18.11■□□□□ 0.49
SSUH2-206ENST00000427408 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
SSUH2-206ENST00000427408 NBPF15Q8N660 670 aa18.11■□□□□ 0.49
SSUH2-206ENST00000427408 TTLL6Q8N841 843 aa18.11■□□□□ 0.49
SSUH2-206ENST00000427408 NMRK2Q9NPI5 230 aa18.11■□□□□ 0.49
SSUH2-206ENST00000427408 RNF181Q9P0P0 153 aa18.11■□□□□ 0.49
SSUH2-206ENST00000427408 H0YIN7 160 aa18.1■□□□□ 0.49
SSUH2-206ENST00000427408 PRR5LQ6MZQ0 368 aa18.1■□□□□ 0.49
SSUH2-206ENST00000427408 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
SSUH2-206ENST00000427408 PRELPP51888 382 aa18.09■□□□□ 0.49
SSUH2-206ENST00000427408 RASSF7Q02833 373 aa18.09■□□□□ 0.49
SSUH2-206ENST00000427408 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
SSUH2-206ENST00000427408 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
SSUH2-206ENST00000427408 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
SSUH2-206ENST00000427408 NFE2L2Q16236 605 aa18.08■□□□□ 0.48
SSUH2-206ENST00000427408 BRIP1Q9BX63 1249 aa18.08■□□□□ 0.48
SSUH2-206ENST00000427408 NRXN2Q9P2S2 1712 aa18.07■□□□□ 0.48
SSUH2-206ENST00000427408 HSPA6P17066 643 aa18.07■□□□□ 0.48
SSUH2-206ENST00000427408 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
SSUH2-206ENST00000427408 ZNF622Q969S3 477 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSUH2-206ENST00000427408 NEFMP07197 916 aa18.06■□□□□ 0.48
SSUH2-206ENST00000427408 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
SSUH2-206ENST00000427408 PDE6BP35913 854 aa18.05■□□□□ 0.48
SSUH2-206ENST00000427408 CNBD1Q8NA66 436 aa18.05■□□□□ 0.48
SSUH2-206ENST00000427408 ZNF219Q9P2Y4 722 aaPredicted RBP18.05■□□□□ 0.48
SSUH2-206ENST00000427408 NFKBIEO00221 500 aa18.04■□□□□ 0.48
SSUH2-206ENST00000427408 RALBP1Q15311 655 aa18.04■□□□□ 0.48
SSUH2-206ENST00000427408 C21orf2O43822 256 aa18.03■□□□□ 0.48
SSUH2-206ENST00000427408 LMNB1P20700 586 aa18.03■□□□□ 0.48
SSUH2-206ENST00000427408 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
SSUH2-206ENST00000427408 HLFQ16534 295 aa18.03■□□□□ 0.48
SSUH2-206ENST00000427408 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
SSUH2-206ENST00000427408 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
SSUH2-206ENST00000427408 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.48
SSUH2-206ENST00000427408 NPHP1O15259 732 aa18.02■□□□□ 0.48
SSUH2-206ENST00000427408 TOMM70O94826 608 aa18.02■□□□□ 0.48
SSUH2-206ENST00000427408 NBPF5PQ86XG9 351 aaPredicted RBP18.02■□□□□ 0.48
SSUH2-206ENST00000427408 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
SSUH2-206ENST00000427408 RRAGCQ9HB90 399 aa18.02■□□□□ 0.48
SSUH2-206ENST00000427408 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
SSUH2-206ENST00000427408 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
SSUH2-206ENST00000427408 ST5P78524 1137 aa18.01■□□□□ 0.47
SSUH2-206ENST00000427408 FAM177BA6PVY3 158 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms