RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 SSH3Q8TE77 659 aa14.24□□□□□ -0.13
FIRRE-201ENST00000427391 NEK4P51957 841 aa14.24□□□□□ -0.13
FIRRE-201ENST00000427391 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
FIRRE-201ENST00000427391 PROSER2Q86WR7 435 aaPredicted RBP14.24□□□□□ -0.13
FIRRE-201ENST00000427391 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
FIRRE-201ENST00000427391 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
FIRRE-201ENST00000427391 ADCY9O60503 1353 aa14.23□□□□□ -0.13
FIRRE-201ENST00000427391 CWF19L2Q2TBE0 894 aaKnown RBP14.23□□□□□ -0.13
FIRRE-201ENST00000427391 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
FIRRE-201ENST00000427391 KRT28Q7Z3Y7 464 aa14.23□□□□□ -0.13
FIRRE-201ENST00000427391 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
FIRRE-201ENST00000427391 BAG4O95429 457 aaKnown RBP14.22□□□□□ -0.13
FIRRE-201ENST00000427391 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
FIRRE-201ENST00000427391 SLC39A6Q13433 755 aa14.22□□□□□ -0.13
FIRRE-201ENST00000427391 RHPN1Q8TCX5 695 aa14.22□□□□□ -0.13
FIRRE-201ENST00000427391 UPF3BQ9BZI7 483 aaKnown RBP14.22□□□□□ -0.13
FIRRE-201ENST00000427391 ST18O60284 1047 aa14.21□□□□□ -0.13
FIRRE-201ENST00000427391 AIMP1Q12904 312 aaKnown RBP14.21□□□□□ -0.13
FIRRE-201ENST00000427391 PA2G4Q9UQ80 394 aaKnown RBP14.21□□□□□ -0.13
FIRRE-201ENST00000427391 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
FIRRE-201ENST00000427391 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
FIRRE-201ENST00000427391 MCTP1Q6DN14 999 aa14.21□□□□□ -0.13
FIRRE-201ENST00000427391 CABLES1Q8TDN4 633 aa14.21□□□□□ -0.14
FIRRE-201ENST00000427391 STAP2Q9UGK3 403 aa14.21□□□□□ -0.14
FIRRE-201ENST00000427391 MED1Q15648 1581 aaPredicted RBP14.2□□□□□ -0.14
FIRRE-201ENST00000427391 POLA2Q14181 598 aa14.2□□□□□ -0.14
FIRRE-201ENST00000427391 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
FIRRE-201ENST00000427391 ZDHHC9Q9Y397 364 aa14.2□□□□□ -0.14
FIRRE-201ENST00000427391 PIP4K2AP48426 406 aaPredicted RBP14.19□□□□□ -0.14
FIRRE-201ENST00000427391 PXDNLA1KZ92 1463 aa14.19□□□□□ -0.14
FIRRE-201ENST00000427391 PI4K2BQ8TCG2 481 aa14.19□□□□□ -0.14
FIRRE-201ENST00000427391 TMX3Q96JJ7 454 aa14.19□□□□□ -0.14
FIRRE-201ENST00000427391 DTNBO60941 627 aa14.18□□□□□ -0.14
FIRRE-201ENST00000427391 OS9Q13438 667 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
FIRRE-201ENST00000427391 NLRP2Q9NX02 1062 aa14.18□□□□□ -0.14
FIRRE-201ENST00000427391 KDM3BQ7LBC6 1761 aa14.18□□□□□ -0.14
FIRRE-201ENST00000427391 RRAGDQ9NQL2 400 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 DBF4Q9UBU7 674 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 DDX49Q9Y6V7 483 aaKnown RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 TUBGCP6Q96RT7 1819 aa14.18□□□□□ -0.14
FIRRE-201ENST00000427391 CYP2E1P05181 493 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 NCLP19338 710 aaKnown RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
FIRRE-201ENST00000427391 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
FIRRE-201ENST00000427391 CHRNA2Q15822 529 aa14.17□□□□□ -0.14
FIRRE-201ENST00000427391 HOXB7P09629 217 aa14.17□□□□□ -0.14
FIRRE-201ENST00000427391 RGPD5Q99666 1765 aa14.17□□□□□ -0.14
FIRRE-201ENST00000427391 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
FIRRE-201ENST00000427391 ZNF142P52746 1687 aaPredicted RBP14.16□□□□□ -0.14
FIRRE-201ENST00000427391 MYL6BP14649 208 aa14.16□□□□□ -0.14
FIRRE-201ENST00000427391 FOXD4L6Q3SYB3 417 aaPredicted RBP14.16□□□□□ -0.14
FIRRE-201ENST00000427391 FOXD4L3Q6VB84 417 aaPredicted RBP14.16□□□□□ -0.14
FIRRE-201ENST00000427391 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
FIRRE-201ENST00000427391 KIF1BPQ96EK5 621 aa14.16□□□□□ -0.14
FIRRE-201ENST00000427391 LMO7Q8WWI1 1683 aa14.16□□□□□ -0.14
FIRRE-201ENST00000427391 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
FIRRE-201ENST00000427391 ERBB3P21860 1342 aa14.16□□□□□ -0.14
FIRRE-201ENST00000427391 N4BP2Q86UW6 1770 aaPredicted RBP14.15□□□□□ -0.14
FIRRE-201ENST00000427391 RAB11FIP3O75154 756 aa14.15□□□□□ -0.14
FIRRE-201ENST00000427391 MRE11P49959 708 aa14.15□□□□□ -0.14
FIRRE-201ENST00000427391 NUCB2P80303 420 aa14.15□□□□□ -0.14
FIRRE-201ENST00000427391 CWC27Q6UX04 472 aaKnown RBP14.15□□□□□ -0.14
FIRRE-201ENST00000427391 GOLGA6L22H0YM25 854 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 KSR2Q6VAB6 950 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 NFATC2IPQ8NCF5 419 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 KLHDC4Q8TBB5 520 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
FIRRE-201ENST00000427391 PDIA4P13667 645 aaKnown RBP14.14□□□□□ -0.15
FIRRE-201ENST00000427391 SUCLG2Q96I99 432 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 LMBRD1Q9NUN5 540 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 SLIT3O75094 1523 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 CPA1P15085 419 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 CAVIN1Q6NZI2 390 aaKnown RBP14.14□□□□□ -0.15
FIRRE-201ENST00000427391 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 KAZALD1Q96I82 304 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 SIL1Q9H173 461 aa14.14□□□□□ -0.15
FIRRE-201ENST00000427391 RBM27Q9P2N5 1060 aaKnown RBP14.14□□□□□ -0.15
FIRRE-201ENST00000427391 MCCP23508 829 aa14.13□□□□□ -0.15
FIRRE-201ENST00000427391 PDIA6Q15084 440 aa14.13□□□□□ -0.15
FIRRE-201ENST00000427391 SKOR2Q2VWA4 1001 aaPredicted RBP14.13□□□□□ -0.15
FIRRE-201ENST00000427391 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
FIRRE-201ENST00000427391 FAM43AQ8N2R8 423 aa14.13□□□□□ -0.15
FIRRE-201ENST00000427391 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
FIRRE-201ENST00000427391 RAPGEF4Q8WZA2 1011 aa14.13□□□□□ -0.15
FIRRE-201ENST00000427391 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
FIRRE-201ENST00000427391 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
FIRRE-201ENST00000427391 BICC1Q9H694 974 aaKnown RBP14.12□□□□□ -0.15
FIRRE-201ENST00000427391 NSFL1CQ9UNZ2 370 aaKnown RBP14.12□□□□□ -0.15
FIRRE-201ENST00000427391 CWC22Q9HCG8 908 aaKnown RBP14.12□□□□□ -0.15
FIRRE-201ENST00000427391 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
FIRRE-201ENST00000427391 NCAPD2Q15021 1401 aa14.11□□□□□ -0.15
FIRRE-201ENST00000427391 SGSM2O43147 1006 aa14.11□□□□□ -0.15
FIRRE-201ENST00000427391 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
FIRRE-201ENST00000427391 ZNF790Q6PG37 636 aa14.11□□□□□ -0.15
FIRRE-201ENST00000427391 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms