RNA–Protein interactions for RNA: ENST00000426508.6

IFT140-203, Transcript of intraflagellar transport 140, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IFT140, Length 5,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-203ENST00000426508 HOMER1Q86YM7 354 aa19.85■□□□□ 0.77
IFT140-203ENST00000426508 SPINK5Q9NQ38 1064 aaPredicted RBP19.85■□□□□ 0.77
IFT140-203ENST00000426508 DCAF5Q96JK2 942 aa19.84■□□□□ 0.77
IFT140-203ENST00000426508 NPHP4O75161 1426 aaPredicted RBP19.84■□□□□ 0.77
IFT140-203ENST00000426508 NAT10Q9H0A0 1025 aaKnown RBP19.84■□□□□ 0.77
IFT140-203ENST00000426508 RAD21O60216 631 aa19.84■□□□□ 0.77
IFT140-203ENST00000426508 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
IFT140-203ENST00000426508 NFATC2IPQ8NCF5 419 aa19.84■□□□□ 0.77
IFT140-203ENST00000426508 IFIT5Q13325 482 aaKnown RBP19.83■□□□□ 0.77
IFT140-203ENST00000426508 CCAR2Q8N163 923 aaKnown RBP19.83■□□□□ 0.77
IFT140-203ENST00000426508 CWC25Q9NXE8 425 aaPredicted RBP19.83■□□□□ 0.77
IFT140-203ENST00000426508 SLAIN2Q9P270 581 aa19.83■□□□□ 0.77
IFT140-203ENST00000426508 HDAC1Q13547 482 aaPredicted RBP19.83■□□□□ 0.77
IFT140-203ENST00000426508 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.77
IFT140-203ENST00000426508 ATP5J2-PTCD1G3V325 749 aa19.83■□□□□ 0.76
IFT140-203ENST00000426508 RNMTO43148 476 aaKnown RBP19.83■□□□□ 0.76
IFT140-203ENST00000426508 TSR1Q2NL82 804 aaKnown RBP19.83■□□□□ 0.76
IFT140-203ENST00000426508 TRIM5Q9C035 493 aa19.83■□□□□ 0.76
IFT140-203ENST00000426508 SYNMO15061 1565 aa19.83■□□□□ 0.76
IFT140-203ENST00000426508 TNNT3P45378 269 aaPredicted RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 SART3Q15020 963 aaKnown RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 PES1O00541 588 aaKnown RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 RNF17Q9BXT8 1623 aaKnown RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 HMGN5P82970 282 aaKnown RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 KRT24Q2M2I5 525 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 C8orf34Q49A92 452 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 ZNF771Q7L3S4 317 aaPredicted RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 XAGE3Q8WTP9 111 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 MEIS3Q99687 375 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 ZMYM4Q5VZL5 1548 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 DDB1Q16531 1140 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 PPP1R42Q7Z4L9 355 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 DHX16O60231 1041 aaKnown RBP19.82■□□□□ 0.76
IFT140-203ENST00000426508 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
IFT140-203ENST00000426508 BLMP54132 1417 aaPredicted RBP19.81■□□□□ 0.76
IFT140-203ENST00000426508 ARHGEF10O15013 1369 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 GPTP24298 496 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
IFT140-203ENST00000426508 COPS6Q7L5N1 327 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 UBE3BQ7Z3V4 1068 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 PCDHB15Q9Y5E8 787 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 FAM135BQ49AJ0 1406 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 SDF4Q9BRK5 362 aa19.81■□□□□ 0.76
IFT140-203ENST00000426508 SOS1Q07889 1333 aaPredicted RBP19.8■□□□□ 0.76
IFT140-203ENST00000426508 BMP2KLQ5H9B9 411 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 ANKRD1Q15327 319 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 TNPO1Q92973 898 aaKnown RBP19.8■□□□□ 0.76
IFT140-203ENST00000426508 C8orf37Q96NL8 207 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 NACAP1Q9BZK3 213 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 MAP3K4Q9Y6R4 1608 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 SPHKAPQ2M3C7 1700 aa19.8■□□□□ 0.76
IFT140-203ENST00000426508 ALDH1L1O75891 902 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 CCDC192P0DO97 292 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 A2ML1A8K2U0 1454 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 ATP7BP35670 1465 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 SAFBQ15424 915 aaKnown RBP eCLIP19.79■□□□□ 0.76
IFT140-203ENST00000426508 BABAM1Q9NWV8 329 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 SLC3A2P08195 630 aaKnown RBP19.79■□□□□ 0.76
IFT140-203ENST00000426508 VPS53Q5VIR6 699 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 DDX17Q92841 729 aaKnown RBP19.79■□□□□ 0.76
IFT140-203ENST00000426508 BTG4Q9NY30 223 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
IFT140-203ENST00000426508 NOC3LQ8WTT2 800 aaKnown RBP19.78■□□□□ 0.76
IFT140-203ENST00000426508 GPS2Q13227 327 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 CCDC8Q9H0W5 538 aaPredicted RBP19.78■□□□□ 0.76
IFT140-203ENST00000426508 BOLA2Q9H3K6 86 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 ANKRD18BA2A2Z9 1011 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 KINO60870 393 aaKnown RBP19.78■□□□□ 0.76
IFT140-203ENST00000426508 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 ZSCAN30Q86W11 494 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 TNNQ9UQP3 1299 aa19.78■□□□□ 0.76
IFT140-203ENST00000426508 ZSCAN31Q96LW9 406 aaPredicted RBP19.77■□□□□ 0.76
IFT140-203ENST00000426508 KRT85P78386 507 aa19.77■□□□□ 0.76
IFT140-203ENST00000426508 ANKRD44Q8N8A2 993 aa19.77■□□□□ 0.76
IFT140-203ENST00000426508 TMEM94Q12767 1356 aa19.77■□□□□ 0.76
IFT140-203ENST00000426508 A0A0U1RQG5 324 aaPredicted RBP19.77■□□□□ 0.75
IFT140-203ENST00000426508 RLBP1P12271 317 aa19.77■□□□□ 0.75
IFT140-203ENST00000426508 IFIT1P09914 478 aaKnown RBP19.76■□□□□ 0.75
IFT140-203ENST00000426508 NBPF6Q5VWK0 638 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 NBPF4Q96M43 638 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 SSFA2P28290 1259 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 RRP12Q5JTH9 1297 aaKnown RBP19.76■□□□□ 0.75
IFT140-203ENST00000426508 ANKRD20A12PQ8NF67 263 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 CTNNA3Q9UI47 895 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 ACSBG1Q96GR2 724 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 CHL1O00533 1208 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 PDRG1Q9NUG6 133 aa19.76■□□□□ 0.75
IFT140-203ENST00000426508 ZNF396Q96N95 335 aaPredicted RBP19.75■□□□□ 0.75
IFT140-203ENST00000426508 TBC1D9Q6ZT07 1266 aa19.75■□□□□ 0.75
IFT140-203ENST00000426508 SMARCC1Q92922 1105 aaPredicted RBP19.75■□□□□ 0.75
IFT140-203ENST00000426508 IDH1O75874 414 aaKnown RBP19.75■□□□□ 0.75
IFT140-203ENST00000426508 CLSTN1O94985 981 aa19.75■□□□□ 0.75
IFT140-203ENST00000426508 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
IFT140-203ENST00000426508 NUCB1Q02818 461 aa19.75■□□□□ 0.75
IFT140-203ENST00000426508 BLOC1S2Q6QNY1 142 aa19.75■□□□□ 0.75
IFT140-203ENST00000426508 LRP2BPQ9P2M1 347 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms