RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 HMMRO75330 724 aa19.34■□□□□ 0.69
PKP4-205ENST00000426248 PIP4K2AP48426 406 aaPredicted RBP19.34■□□□□ 0.69
PKP4-205ENST00000426248 FOXD4L6Q3SYB3 417 aaPredicted RBP19.34■□□□□ 0.69
PKP4-205ENST00000426248 FOXD4L3Q6VB84 417 aaPredicted RBP19.34■□□□□ 0.69
PKP4-205ENST00000426248 IL2RBP14784 551 aa19.34■□□□□ 0.69
PKP4-205ENST00000426248 RNMTO43148 476 aaKnown RBP19.34■□□□□ 0.69
PKP4-205ENST00000426248 DDX58O95786 925 aaKnown RBP19.34■□□□□ 0.69
PKP4-205ENST00000426248 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
PKP4-205ENST00000426248 EXOC5O00471 708 aa19.33■□□□□ 0.69
PKP4-205ENST00000426248 HTATSF1O43719 755 aaKnown RBP19.33■□□□□ 0.69
PKP4-205ENST00000426248 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.69
PKP4-205ENST00000426248 KCNQ3O43525 872 aa19.33■□□□□ 0.68
PKP4-205ENST00000426248 FLIIQ13045 1269 aa19.32■□□□□ 0.68
PKP4-205ENST00000426248 PRPF40AO75400 957 aaKnown RBP19.32■□□□□ 0.68
PKP4-205ENST00000426248 ZBTB22O15209 634 aa19.32■□□□□ 0.68
PKP4-205ENST00000426248 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
PKP4-205ENST00000426248 NPHP1O15259 732 aa19.31■□□□□ 0.68
PKP4-205ENST00000426248 ZKSCAN5Q9Y2L8 839 aa19.31■□□□□ 0.68
PKP4-205ENST00000426248 TMOD3Q9NYL9 352 aa19.31■□□□□ 0.68
PKP4-205ENST00000426248 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
PKP4-205ENST00000426248 UBTFL1P0CB47 393 aaPredicted RBP19.3■□□□□ 0.68
PKP4-205ENST00000426248 TERF1P54274 439 aa19.3■□□□□ 0.68
PKP4-205ENST00000426248 G2E3Q7L622 706 aa19.3■□□□□ 0.68
PKP4-205ENST00000426248 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
PKP4-205ENST00000426248 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
PKP4-205ENST00000426248 PDCL2Q8N4E4 241 aa19.3■□□□□ 0.68
PKP4-205ENST00000426248 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
PKP4-205ENST00000426248 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
PKP4-205ENST00000426248 TAF7LQ5H9L4 462 aa19.29■□□□□ 0.68
PKP4-205ENST00000426248 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
PKP4-205ENST00000426248 MAP2P11137 1827 aaKnown RBP19.29■□□□□ 0.68
PKP4-205ENST00000426248 ITSN1Q15811 1721 aa19.29■□□□□ 0.68
PKP4-205ENST00000426248 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
PKP4-205ENST00000426248 MST1RQ04912 1400 aa19.28■□□□□ 0.68
PKP4-205ENST00000426248 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
PKP4-205ENST00000426248 GTPBP4Q9BZE4 634 aaKnown RBP19.28■□□□□ 0.68
PKP4-205ENST00000426248 KCNJ4P48050 445 aa19.28■□□□□ 0.68
PKP4-205ENST00000426248 ZNF830Q96NB3 372 aaPredicted RBP19.28■□□□□ 0.68
PKP4-205ENST00000426248 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
PKP4-205ENST00000426248 RTL1A6NKG5 1358 aa19.28■□□□□ 0.68
PKP4-205ENST00000426248 SYCE3A1L190 88 aa19.27■□□□□ 0.68
PKP4-205ENST00000426248 SRCIN1Q9C0H9 1055 aa19.27■□□□□ 0.68
PKP4-205ENST00000426248 KIF3AQ9Y496 699 aa19.27■□□□□ 0.68
PKP4-205ENST00000426248 KIF20AO95235 890 aa19.27■□□□□ 0.68
PKP4-205ENST00000426248 UTP14CQ5TAP6 766 aaKnown RBP19.27■□□□□ 0.68
PKP4-205ENST00000426248 TNS3Q68CZ2 1445 aa19.27■□□□□ 0.67
PKP4-205ENST00000426248 KIF24Q5T7B8 1368 aa19.26■□□□□ 0.67
PKP4-205ENST00000426248 PI4KAP2A4QPH2 592 aa19.26■□□□□ 0.67
PKP4-205ENST00000426248 ZSCAN20P17040 1043 aaPredicted RBP19.26■□□□□ 0.67
PKP4-205ENST00000426248 PRIM1P49642 420 aaKnown RBP19.26■□□□□ 0.67
PKP4-205ENST00000426248 CCT4P50991 539 aaKnown RBP19.26■□□□□ 0.67
PKP4-205ENST00000426248 PI4KAP1Q8N8J0 262 aa19.26■□□□□ 0.67
PKP4-205ENST00000426248 ACSBG1Q96GR2 724 aa19.26■□□□□ 0.67
PKP4-205ENST00000426248 PHAXQ9H814 394 aaKnown RBP19.26■□□□□ 0.67
PKP4-205ENST00000426248 TNNT3P45378 269 aaPredicted RBP19.26■□□□□ 0.67
PKP4-205ENST00000426248 RBSNQ9H1K0 784 aa19.26■□□□□ 0.67
PKP4-205ENST00000426248 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
PKP4-205ENST00000426248 DCAF5Q96JK2 942 aa19.26■□□□□ 0.67
PKP4-205ENST00000426248 NOL8Q76FK4 1167 aaKnown RBP19.25■□□□□ 0.67
PKP4-205ENST00000426248 FMNL2Q96PY5 1086 aa19.25■□□□□ 0.67
PKP4-205ENST00000426248 ZSCAN23Q3MJ62 389 aa19.25■□□□□ 0.67
PKP4-205ENST00000426248 GNAI3P08754 354 aa19.24■□□□□ 0.67
PKP4-205ENST00000426248 ERICH4A6NGS2 130 aa19.24■□□□□ 0.67
PKP4-205ENST00000426248 CIZ1Q9ULV3 898 aaPredicted RBP19.24■□□□□ 0.67
PKP4-205ENST00000426248 HMGN5P82970 282 aaKnown RBP19.24■□□□□ 0.67
PKP4-205ENST00000426248 KLHL40Q2TBA0 621 aa19.24■□□□□ 0.67
PKP4-205ENST00000426248 GNAI2P04899 355 aa19.23■□□□□ 0.67
PKP4-205ENST00000426248 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
PKP4-205ENST00000426248 IPO4Q8TEX9 1081 aaKnown RBP19.23■□□□□ 0.67
PKP4-205ENST00000426248 BAG4O95429 457 aaKnown RBP19.23■□□□□ 0.67
PKP4-205ENST00000426248 MEIS3Q99687 375 aa19.23■□□□□ 0.67
PKP4-205ENST00000426248 PHKG2P15735 406 aa19.23■□□□□ 0.67
PKP4-205ENST00000426248 SSH2Q76I76 1423 aa19.23■□□□□ 0.67
PKP4-205ENST00000426248 RAB3GAP1Q15042 981 aa19.23■□□□□ 0.67
PKP4-205ENST00000426248 DDB1Q16531 1140 aa19.22■□□□□ 0.67
PKP4-205ENST00000426248 ZNF790Q6PG37 636 aa19.22■□□□□ 0.67
PKP4-205ENST00000426248 WDR17Q8IZU2 1322 aa19.22■□□□□ 0.67
PKP4-205ENST00000426248 K7ELQ4 463 aaPredicted RBP19.22■□□□□ 0.67
PKP4-205ENST00000426248 C17orf53Q8N3J3 647 aaPredicted RBP19.21■□□□□ 0.67
PKP4-205ENST00000426248 COL3A1P02461 1466 aaPredicted RBP19.21■□□□□ 0.67
PKP4-205ENST00000426248 ARHGAP45Q92619 1136 aa19.21■□□□□ 0.67
PKP4-205ENST00000426248 PTPRCP08575 1304 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 ZNF500O60304 480 aaPredicted RBP19.2■□□□□ 0.66
PKP4-205ENST00000426248 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
PKP4-205ENST00000426248 HDAC5Q9UQL6 1122 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 KIF20BQ96Q89 1820 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 U2AF2P26368 475 aaKnown RBP eCLIP19.2■□□□□ 0.663e-7■■■■□ 21.5
PKP4-205ENST00000426248 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
PKP4-205ENST00000426248 DNAAF4Q8WXU2 420 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
PKP4-205ENST00000426248 SLC52A2Q9HAB3 445 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 TRIM6-TRIM34B2RNG4 842 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 SURF6O75683 361 aaKnown RBP19.2■□□□□ 0.66
PKP4-205ENST00000426248 PCDH11XQ9BZA7 1347 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 PCDH11YQ9BZA8 1340 aa19.2■□□□□ 0.66
PKP4-205ENST00000426248 MAP3K2Q9Y2U5 619 aa19.19■□□□□ 0.66
PKP4-205ENST00000426248 RGPD8O14715 1765 aaPredicted RBP19.19■□□□□ 0.66
PKP4-205ENST00000426248 SETD1AO15047 1707 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms