RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FAM13BQ9NYF5 915 aa16.35■□□□□ 0.21
USP42-203ENST00000426246 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
USP42-203ENST00000426246 SOS2Q07890 1332 aaPredicted RBP16.35■□□□□ 0.21
USP42-203ENST00000426246 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
USP42-203ENST00000426246 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
USP42-203ENST00000426246 R3HCC1Q9Y3T6 440 aaKnown RBP16.34■□□□□ 0.21
USP42-203ENST00000426246 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
USP42-203ENST00000426246 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.21
USP42-203ENST00000426246 KIAA0232Q92628 1395 aa16.33■□□□□ 0.21
USP42-203ENST00000426246 PPFIA3O75145 1194 aa16.33■□□□□ 0.2
USP42-203ENST00000426246 HMMRO75330 724 aa16.33■□□□□ 0.2
USP42-203ENST00000426246 ERBB3P21860 1342 aa16.33■□□□□ 0.2
USP42-203ENST00000426246 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
USP42-203ENST00000426246 FOSBP53539 338 aa16.33■□□□□ 0.2
USP42-203ENST00000426246 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
USP42-203ENST00000426246 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 CPDO75976 1380 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 CPA1P15085 419 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 SIPA1L3O60292 1781 aaPredicted RBP16.32■□□□□ 0.2
USP42-203ENST00000426246 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 LTBP4Q8N2S1 1624 aa16.32■□□□□ 0.2
USP42-203ENST00000426246 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
USP42-203ENST00000426246 CABLES1Q8TDN4 633 aa16.31■□□□□ 0.2
USP42-203ENST00000426246 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
USP42-203ENST00000426246 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
USP42-203ENST00000426246 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
USP42-203ENST00000426246 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
USP42-203ENST00000426246 REC8O95072 547 aa16.3■□□□□ 0.2
USP42-203ENST00000426246 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
USP42-203ENST00000426246 KIF2CQ99661 725 aa16.29■□□□□ 0.2
USP42-203ENST00000426246 RGS12O14924 1447 aa16.29■□□□□ 0.2
USP42-203ENST00000426246 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
USP42-203ENST00000426246 RABEP1Q15276 862 aa16.29■□□□□ 0.2
USP42-203ENST00000426246 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
USP42-203ENST00000426246 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
USP42-203ENST00000426246 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
USP42-203ENST00000426246 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
USP42-203ENST00000426246 ZNF830Q96NB3 372 aaPredicted RBP16.28■□□□□ 0.2
USP42-203ENST00000426246 SIL1Q9H173 461 aa16.28■□□□□ 0.2
USP42-203ENST00000426246 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
USP42-203ENST00000426246 FIBPO43427 364 aa16.28■□□□□ 0.2
USP42-203ENST00000426246 TCEANC2Q96MN5 208 aa16.28■□□□□ 0.2
USP42-203ENST00000426246 ZNF330Q9Y3S2 320 aaPredicted RBP16.28■□□□□ 0.2
USP42-203ENST00000426246 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.2
USP42-203ENST00000426246 ERC2O15083 957 aa16.27■□□□□ 0.2
USP42-203ENST00000426246 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.2
USP42-203ENST00000426246 KIAA1211Q6ZU35 1233 aa16.27■□□□□ 0.2
USP42-203ENST00000426246 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
USP42-203ENST00000426246 A0A0G2JS52 829 aa16.27■□□□□ 0.19
USP42-203ENST00000426246 MCCP23508 829 aa16.27■□□□□ 0.19
USP42-203ENST00000426246 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.19
USP42-203ENST00000426246 GNAI2P04899 355 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 SKOR2Q2VWA4 1001 aaPredicted RBP16.26■□□□□ 0.19
USP42-203ENST00000426246 VPS37CA5D8V6 355 aaPredicted RBP16.26■□□□□ 0.19
USP42-203ENST00000426246 UBTFL1P0CB47 393 aaPredicted RBP16.26■□□□□ 0.19
USP42-203ENST00000426246 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 DCTPP1Q9H773 170 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
USP42-203ENST00000426246 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
USP42-203ENST00000426246 ROBO1Q9Y6N7 1651 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 ABCC4O15439 1325 aa16.26■□□□□ 0.19
USP42-203ENST00000426246 FBXW7Q969H0 707 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 MEGF6O75095 1541 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 OVOS2A0A0G2JMS6 1433 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 SCN11AQ9UI33 1791 aa16.25■□□□□ 0.19
USP42-203ENST00000426246 NUCB2P80303 420 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 ZSCAN23Q3MJ62 389 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 ANKRD44Q8N8A2 993 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 LGR6Q9HBX8 967 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 PDE1AP54750 535 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
USP42-203ENST00000426246 FLIIQ13045 1269 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 TMX3Q96JJ7 454 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 RBSNQ9H1K0 784 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 MX1P20591 662 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 CHRNA2Q15822 529 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
USP42-203ENST00000426246 AHDC1Q5TGY3 1603 aaPredicted RBP16.22■□□□□ 0.19
USP42-203ENST00000426246 STK3Q13188 491 aa16.22■□□□□ 0.19
USP42-203ENST00000426246 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
USP42-203ENST00000426246 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
USP42-203ENST00000426246 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
USP42-203ENST00000426246 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.19
USP42-203ENST00000426246 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
USP42-203ENST00000426246 AMOTQ4VCS5 1084 aa16.21■□□□□ 0.19
USP42-203ENST00000426246 SNX21Q969T3 373 aa16.21■□□□□ 0.19
USP42-203ENST00000426246 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
USP42-203ENST00000426246 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
USP42-203ENST00000426246 SHANK3Q9BYB0 1731 aa16.21■□□□□ 0.19
USP42-203ENST00000426246 COL5A2P05997 1499 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms