RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
SLC6A1-202ENST00000425938 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
SLC6A1-202ENST00000425938 SOS1Q07889 1333 aaPredicted RBP23.12■■□□□ 1.29
SLC6A1-202ENST00000425938 GYS1P13807 737 aa23.12■■□□□ 1.29
SLC6A1-202ENST00000425938 USP42Q9H9J4 1324 aaKnown RBP23.11■■□□□ 1.29
SLC6A1-202ENST00000425938 WDR43Q15061 677 aaKnown RBP eCLIP23.11■■□□□ 1.29
SLC6A1-202ENST00000425938 ZBTB1Q9Y2K1 713 aa23.11■■□□□ 1.29
SLC6A1-202ENST00000425938 ZPR1O75312 459 aa23.1■■□□□ 1.29
SLC6A1-202ENST00000425938 ZNF784Q8NCA9 323 aaPredicted RBP23.1■■□□□ 1.29
SLC6A1-202ENST00000425938 KCNQ3O43525 872 aa23.09■■□□□ 1.29
SLC6A1-202ENST00000425938 CANXP27824 592 aaKnown RBP23.09■■□□□ 1.29
SLC6A1-202ENST00000425938 TAF7Q15545 349 aaPredicted RBP23.09■■□□□ 1.29
SLC6A1-202ENST00000425938 SRP68Q9UHB9 627 aaKnown RBP23.09■■□□□ 1.29
SLC6A1-202ENST00000425938 COL15A1P39059 1388 aa23.09■■□□□ 1.29
SLC6A1-202ENST00000425938 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
SLC6A1-202ENST00000425938 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
SLC6A1-202ENST00000425938 PARP3Q9Y6F1 533 aa23.07■■□□□ 1.28
SLC6A1-202ENST00000425938 A0A087WZG4 1122 aa23.05■■□□□ 1.28
SLC6A1-202ENST00000425938 FKBP8Q14318 412 aa23.05■■□□□ 1.28
SLC6A1-202ENST00000425938 USPL1Q5W0Q7 1092 aa23.05■■□□□ 1.28
SLC6A1-202ENST00000425938 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
SLC6A1-202ENST00000425938 NARFQ9UHQ1 456 aa23.05■■□□□ 1.28
SLC6A1-202ENST00000425938 KIF13BQ9NQT8 1826 aa23.05■■□□□ 1.28
SLC6A1-202ENST00000425938 SNRPA1P09661 255 aaKnown RBP23.04■■□□□ 1.28
SLC6A1-202ENST00000425938 RIPK4P57078 832 aa23.04■■□□□ 1.28
SLC6A1-202ENST00000425938 TGFB2P61812 414 aa23.04■■□□□ 1.28
SLC6A1-202ENST00000425938 C10orf71Q711Q0 1435 aa23.03■■□□□ 1.28
SLC6A1-202ENST00000425938 EIF5P55010 431 aaKnown RBP23.03■■□□□ 1.28
SLC6A1-202ENST00000425938 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
SLC6A1-202ENST00000425938 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
SLC6A1-202ENST00000425938 CCDC146Q8IYE0 955 aa23.02■■□□□ 1.28
SLC6A1-202ENST00000425938 THUMPD2Q9BTF0 503 aaKnown RBP23.02■■□□□ 1.28
SLC6A1-202ENST00000425938 MIS18AQ9NYP9 233 aa23.02■■□□□ 1.28
SLC6A1-202ENST00000425938 ZNF330Q9Y3S2 320 aaPredicted RBP23.02■■□□□ 1.28
SLC6A1-202ENST00000425938 KDM3BQ7LBC6 1761 aa23.01■■□□□ 1.27
SLC6A1-202ENST00000425938 PXDNLA1KZ92 1463 aa23.01■■□□□ 1.27
SLC6A1-202ENST00000425938 A1BGP04217 495 aa23.01■■□□□ 1.27
SLC6A1-202ENST00000425938 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
SLC6A1-202ENST00000425938 RUNDC1Q96C34 613 aa23.01■■□□□ 1.27
SLC6A1-202ENST00000425938 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
SLC6A1-202ENST00000425938 USP16Q9Y5T5 823 aa23■■□□□ 1.27
SLC6A1-202ENST00000425938 WWC3Q9ULE0 1092 aa22.99■■□□□ 1.27
SLC6A1-202ENST00000425938 TM4SF1P30408 202 aa22.98■■□□□ 1.27
SLC6A1-202ENST00000425938 DDR1Q08345 913 aa22.98■■□□□ 1.27
SLC6A1-202ENST00000425938 KIAA1551Q9HCM1 1747 aa22.98■■□□□ 1.27
SLC6A1-202ENST00000425938 LAMB4A4D0S4 1761 aa22.97■■□□□ 1.27
SLC6A1-202ENST00000425938 A0A0G2JLW4 131 aa22.97■■□□□ 1.27
SLC6A1-202ENST00000425938 PRAMEF22A3QJZ6 481 aa22.97■■□□□ 1.27
SLC6A1-202ENST00000425938 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
SLC6A1-202ENST00000425938 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
SLC6A1-202ENST00000425938 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
SLC6A1-202ENST00000425938 POLRMTO00411 1230 aaKnown RBP22.96■■□□□ 1.27
SLC6A1-202ENST00000425938 NFIXQ14938 502 aa22.96■■□□□ 1.27
SLC6A1-202ENST00000425938 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
SLC6A1-202ENST00000425938 DPEP1P16444 411 aa22.95■■□□□ 1.26
SLC6A1-202ENST00000425938 BCL2L12Q9HB09 334 aa22.95■■□□□ 1.26
SLC6A1-202ENST00000425938 TSPYL4Q9UJ04 414 aa22.95■■□□□ 1.26
SLC6A1-202ENST00000425938 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
SLC6A1-202ENST00000425938 AFDNP55196 1824 aaKnown RBP22.94■■□□□ 1.26
SLC6A1-202ENST00000425938 EIF4A1P60842 406 aaKnown RBP22.94■■□□□ 1.26
SLC6A1-202ENST00000425938 ANP32CO43423 234 aa22.93■■□□□ 1.26
SLC6A1-202ENST00000425938 BABAM1Q9NWV8 329 aa22.93■■□□□ 1.26
SLC6A1-202ENST00000425938 GIGYF1O75420 1035 aaPredicted RBP22.92■■□□□ 1.26
SLC6A1-202ENST00000425938 PIP4K2AP48426 406 aaPredicted RBP22.92■■□□□ 1.26
SLC6A1-202ENST00000425938 DZIP3Q86Y13 1208 aaKnown RBP22.92■■□□□ 1.26
SLC6A1-202ENST00000425938 BCS1LQ9Y276 419 aa22.92■■□□□ 1.26
SLC6A1-202ENST00000425938 BICDL1Q6ZP65 573 aa22.91■■□□□ 1.26
SLC6A1-202ENST00000425938 BCORQ6W2J9 1755 aa22.91■■□□□ 1.26
SLC6A1-202ENST00000425938 CAMTA2O94983 1202 aa22.9■■□□□ 1.26
SLC6A1-202ENST00000425938 SERPINB2P05120 415 aa22.9■■□□□ 1.26
SLC6A1-202ENST00000425938 KCNA3P22001 575 aa22.9■■□□□ 1.26
SLC6A1-202ENST00000425938 NRXN2Q9P2S2 1712 aa22.9■■□□□ 1.26
SLC6A1-202ENST00000425938 NBPF26B4DH59 902 aa22.89■■□□□ 1.25
SLC6A1-202ENST00000425938 TBC1D9BQ66K14 1250 aa22.89■■□□□ 1.25
SLC6A1-202ENST00000425938 NBPF10Q6P3W6 841 aaKnown RBP22.89■■□□□ 1.25
SLC6A1-202ENST00000425938 NBPF15Q8N660 670 aa22.89■■□□□ 1.25
SLC6A1-202ENST00000425938 PIM2Q9P1W9 311 aa22.89■■□□□ 1.25
SLC6A1-202ENST00000425938 BRCA1P38398 1863 aaKnown RBP22.89■■□□□ 1.25
SLC6A1-202ENST00000425938 TRIM35Q9UPQ4 493 aa22.88■■□□□ 1.25
SLC6A1-202ENST00000425938 ZNF652Q9Y2D9 606 aa22.88■■□□□ 1.25
SLC6A1-202ENST00000425938 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
SLC6A1-202ENST00000425938 SETDB2Q96T68 719 aa22.87■■□□□ 1.25
SLC6A1-202ENST00000425938 ADCY9O60503 1353 aa22.87■■□□□ 1.25
SLC6A1-202ENST00000425938 CARMIL3Q8ND23 1372 aa22.87■■□□□ 1.25
SLC6A1-202ENST00000425938 CLEC4GQ6UXB4 293 aa22.86■■□□□ 1.25
SLC6A1-202ENST00000425938 LAS1LQ9Y4W2 734 aaKnown RBP22.86■■□□□ 1.25
SLC6A1-202ENST00000425938 APAF1O14727 1248 aa22.85■■□□□ 1.25
SLC6A1-202ENST00000425938 DALRD3Q5D0E6 543 aaKnown RBP22.85■■□□□ 1.25
SLC6A1-202ENST00000425938 ARHGAP27Q6ZUM4 889 aa22.85■■□□□ 1.25
SLC6A1-202ENST00000425938 RGL2O15211 777 aa22.84■■□□□ 1.25
SLC6A1-202ENST00000425938 NPHP1O15259 732 aa22.84■■□□□ 1.25
SLC6A1-202ENST00000425938 CHRNA5P30532 468 aa22.84■■□□□ 1.25
SLC6A1-202ENST00000425938 C1QTNF8P60827 252 aa22.84■■□□□ 1.25
SLC6A1-202ENST00000425938 ERBB4Q15303 1308 aa22.83■■□□□ 1.25
SLC6A1-202ENST00000425938 ARFGEF1Q9Y6D6 1849 aa22.83■■□□□ 1.25
SLC6A1-202ENST00000425938 CHL1O00533 1208 aa22.83■■□□□ 1.25
SLC6A1-202ENST00000425938 CCDC184Q52MB2 194 aa22.83■■□□□ 1.25
SLC6A1-202ENST00000425938 MRS2Q9HD23 443 aa22.83■■□□□ 1.25
SLC6A1-202ENST00000425938 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
SLC6A1-202ENST00000425938 GPBP1L1Q9HC44 474 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms