RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
HLA-DQB3-203ENST00000425319 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
HLA-DQB3-203ENST00000425319 HMOX1P09601 288 aa16.53■□□□□ 0.24
HLA-DQB3-203ENST00000425319 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB3-203ENST00000425319 CANXP27824 592 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB3-203ENST00000425319 PDE6BP35913 854 aa16.52■□□□□ 0.24
HLA-DQB3-203ENST00000425319 SLC39A6Q13433 755 aa16.52■□□□□ 0.24
HLA-DQB3-203ENST00000425319 C2CD5Q86YS7 1000 aa16.52■□□□□ 0.24
HLA-DQB3-203ENST00000425319 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.24
HLA-DQB3-203ENST00000425319 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
HLA-DQB3-203ENST00000425319 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
HLA-DQB3-203ENST00000425319 NFIXQ14938 502 aa16.51■□□□□ 0.23
HLA-DQB3-203ENST00000425319 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
HLA-DQB3-203ENST00000425319 KLRG1Q96E93 195 aa16.51■□□□□ 0.23
HLA-DQB3-203ENST00000425319 GLTPD2A6NH11 291 aa16.5■□□□□ 0.23
HLA-DQB3-203ENST00000425319 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB3-203ENST00000425319 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
HLA-DQB3-203ENST00000425319 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.23
HLA-DQB3-203ENST00000425319 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB3-203ENST00000425319 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQB3-203ENST00000425319 COL15A1P39059 1388 aa16.49■□□□□ 0.23
HLA-DQB3-203ENST00000425319 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
HLA-DQB3-203ENST00000425319 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
HLA-DQB3-203ENST00000425319 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 CC2D1BQ5T0F9 858 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 SOGA3Q5TF21 947 aa16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
HLA-DQB3-203ENST00000425319 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.23
HLA-DQB3-203ENST00000425319 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.22
HLA-DQB3-203ENST00000425319 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
HLA-DQB3-203ENST00000425319 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB3-203ENST00000425319 ST5P78524 1137 aa16.45■□□□□ 0.22
HLA-DQB3-203ENST00000425319 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
HLA-DQB3-203ENST00000425319 CNKSR1Q969H4 720 aa16.45■□□□□ 0.22
HLA-DQB3-203ENST00000425319 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
HLA-DQB3-203ENST00000425319 EIF5P55010 431 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB3-203ENST00000425319 RASSF7Q02833 373 aa16.44■□□□□ 0.22
HLA-DQB3-203ENST00000425319 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
HLA-DQB3-203ENST00000425319 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
HLA-DQB3-203ENST00000425319 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB3-203ENST00000425319 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
HLA-DQB3-203ENST00000425319 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
HLA-DQB3-203ENST00000425319 C21orf2O43822 256 aa16.42■□□□□ 0.22
HLA-DQB3-203ENST00000425319 NEFMP07197 916 aa16.42■□□□□ 0.22
HLA-DQB3-203ENST00000425319 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
HLA-DQB3-203ENST00000425319 ZNF652Q9Y2D9 606 aa16.42■□□□□ 0.22
HLA-DQB3-203ENST00000425319 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB3-203ENST00000425319 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
HLA-DQB3-203ENST00000425319 CNBD1Q8NA66 436 aa16.41■□□□□ 0.22
HLA-DQB3-203ENST00000425319 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
HLA-DQB3-203ENST00000425319 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
HLA-DQB3-203ENST00000425319 COL5A3P25940 1745 aaPredicted RBP16.41■□□□□ 0.22
HLA-DQB3-203ENST00000425319 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
HLA-DQB3-203ENST00000425319 HTRA3P83110 453 aa16.4■□□□□ 0.22
HLA-DQB3-203ENST00000425319 TNS4Q8IZW8 715 aa16.4■□□□□ 0.22
HLA-DQB3-203ENST00000425319 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB3-203ENST00000425319 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 TAOK3Q9H2K8 898 aa16.39■□□□□ 0.21
HLA-DQB3-203ENST00000425319 PER1O15534 1290 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB3-203ENST00000425319 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB3-203ENST00000425319 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
HLA-DQB3-203ENST00000425319 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
HLA-DQB3-203ENST00000425319 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
HLA-DQB3-203ENST00000425319 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB3-203ENST00000425319 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
HLA-DQB3-203ENST00000425319 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB3-203ENST00000425319 ARFGEF1Q9Y6D6 1849 aa16.36■□□□□ 0.21
HLA-DQB3-203ENST00000425319 A1BGP04217 495 aa16.36■□□□□ 0.21
HLA-DQB3-203ENST00000425319 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
HLA-DQB3-203ENST00000425319 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
HLA-DQB3-203ENST00000425319 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
HLA-DQB3-203ENST00000425319 NFKBIEO00221 500 aa16.35■□□□□ 0.21
HLA-DQB3-203ENST00000425319 COL13A1Q5TAT6 717 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQB3-203ENST00000425319 LTBP3Q9NS15 1303 aa16.35■□□□□ 0.21
HLA-DQB3-203ENST00000425319 SRGNP10124 158 aa16.34■□□□□ 0.21
HLA-DQB3-203ENST00000425319 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
HLA-DQB3-203ENST00000425319 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
HLA-DQB3-203ENST00000425319 MRC1P22897 1456 aa16.34■□□□□ 0.21
HLA-DQB3-203ENST00000425319 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
HLA-DQB3-203ENST00000425319 CAPN15O75808 1086 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 U2AF1L5P0DN76 240 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 NPR1P16066 1061 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PRKAR2BP31323 418 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 U2AF1Q01081 240 aaKnown RBP eCLIP16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CCDC93Q567U6 631 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 RTKN2Q8IZC4 609 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 TMX4Q9H1E5 349 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CREBZFQ9NS37 354 aa16.33■□□□□ 0.2
HLA-DQB3-203ENST00000425319 RGL2O15211 777 aa16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms