RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 NBPF1Q3BBV0 1214 aa11.32□□□□□ -0.6
LINC01040-201ENST00000425048 ARSJQ5FYB0 599 aaPredicted RBP11.32□□□□□ -0.6
LINC01040-201ENST00000425048 SLCO4C1Q6ZQN7 724 aa11.32□□□□□ -0.6
LINC01040-201ENST00000425048 COG6Q9Y2V7 657 aa11.32□□□□□ -0.6
LINC01040-201ENST00000425048 PCDHGA11Q9Y5H2 935 aa11.32□□□□□ -0.6
LINC01040-201ENST00000425048 A0A1W2PNR3 127 aa11.31□□□□□ -0.6
LINC01040-201ENST00000425048 ITGB2P05107 769 aa11.31□□□□□ -0.6
LINC01040-201ENST00000425048 EML3Q32P44 896 aa11.31□□□□□ -0.6
LINC01040-201ENST00000425048 ALYREFQ86V81 257 aaKnown RBP11.31□□□□□ -0.6
LINC01040-201ENST00000425048 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
LINC01040-201ENST00000425048 ARAFP10398 606 aa11.3□□□□□ -0.6
LINC01040-201ENST00000425048 TATP17735 454 aaPredicted RBP11.3□□□□□ -0.6
LINC01040-201ENST00000425048 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
LINC01040-201ENST00000425048 CABP1Q9NZU7 370 aa11.3□□□□□ -0.6
LINC01040-201ENST00000425048 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
LINC01040-201ENST00000425048 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
LINC01040-201ENST00000425048 BACH1O14867 736 aa11.29□□□□□ -0.6
LINC01040-201ENST00000425048 SKIP12755 728 aa11.29□□□□□ -0.6
LINC01040-201ENST00000425048 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
LINC01040-201ENST00000425048 BTBD6Q96KE9 485 aa11.29□□□□□ -0.6
LINC01040-201ENST00000425048 ALG2Q9H553 416 aa11.29□□□□□ -0.6
LINC01040-201ENST00000425048 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
LINC01040-201ENST00000425048 PIK3R2O00459 728 aa11.28□□□□□ -0.6
LINC01040-201ENST00000425048 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
LINC01040-201ENST00000425048 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
LINC01040-201ENST00000425048 EPXP11678 715 aa11.27□□□□□ -0.61
LINC01040-201ENST00000425048 TNP2Q05952 138 aa11.27□□□□□ -0.61
LINC01040-201ENST00000425048 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
LINC01040-201ENST00000425048 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
LINC01040-201ENST00000425048 ZIC5Q96T25 663 aa11.27□□□□□ -0.61
LINC01040-201ENST00000425048 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.61
LINC01040-201ENST00000425048 KRBA1A5PL33 1030 aa11.26□□□□□ -0.61
LINC01040-201ENST00000425048 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
LINC01040-201ENST00000425048 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
LINC01040-201ENST00000425048 PROCP04070 461 aa11.25□□□□□ -0.61
LINC01040-201ENST00000425048 HOXB4P17483 251 aaPredicted RBP11.25□□□□□ -0.61
LINC01040-201ENST00000425048 COL8A1P27658 744 aa11.25□□□□□ -0.61
LINC01040-201ENST00000425048 GTF2IP78347 998 aa11.25□□□□□ -0.61
LINC01040-201ENST00000425048 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
LINC01040-201ENST00000425048 DCDC2BA2VCK2 349 aa11.24□□□□□ -0.61
LINC01040-201ENST00000425048 PSME1Q06323 249 aa11.24□□□□□ -0.61
LINC01040-201ENST00000425048 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
LINC01040-201ENST00000425048 GNB5O14775 395 aa11.23□□□□□ -0.61
LINC01040-201ENST00000425048 ADH6P28332 368 aa11.23□□□□□ -0.61
LINC01040-201ENST00000425048 GRIN2CQ14957 1233 aa11.23□□□□□ -0.61
LINC01040-201ENST00000425048 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
LINC01040-201ENST00000425048 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
LINC01040-201ENST00000425048 RAD21O60216 631 aa11.22□□□□□ -0.61
LINC01040-201ENST00000425048 ADAM23O75077 832 aa11.22□□□□□ -0.61
LINC01040-201ENST00000425048 CD33P20138 364 aa11.22□□□□□ -0.61
LINC01040-201ENST00000425048 NCOA4Q13772 614 aa11.22□□□□□ -0.61
LINC01040-201ENST00000425048 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC01040-201ENST00000425048 SUV39H2Q9H5I1 410 aa11.22□□□□□ -0.61
LINC01040-201ENST00000425048 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
LINC01040-201ENST00000425048 FAM157BP0CG42 384 aa11.21□□□□□ -0.61
LINC01040-201ENST00000425048 ZNF358Q9NW07 568 aa11.21□□□□□ -0.61
LINC01040-201ENST00000425048 KLF15Q9UIH9 416 aa11.21□□□□□ -0.61
LINC01040-201ENST00000425048 HCN2Q9UL51 889 aa11.21□□□□□ -0.61
LINC01040-201ENST00000425048 PRR12Q9ULL5 1215 aa11.21□□□□□ -0.61
LINC01040-201ENST00000425048 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
LINC01040-201ENST00000425048 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
LINC01040-201ENST00000425048 MARK1Q9P0L2 795 aa11.2□□□□□ -0.62
LINC01040-201ENST00000425048 NOS2P35228 1153 aa11.19□□□□□ -0.62
LINC01040-201ENST00000425048 LAMC2Q13753 1193 aa11.19□□□□□ -0.62
LINC01040-201ENST00000425048 TEAD4Q15561 434 aa11.19□□□□□ -0.62
LINC01040-201ENST00000425048 CHSY3Q70JA7 882 aa11.19□□□□□ -0.62
LINC01040-201ENST00000425048 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
LINC01040-201ENST00000425048 NOP53Q9NZM5 478 aaKnown RBP11.19□□□□□ -0.62
LINC01040-201ENST00000425048 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
LINC01040-201ENST00000425048 TXLNAP40222 546 aa11.18□□□□□ -0.62
LINC01040-201ENST00000425048 DGKGP49619 791 aa11.18□□□□□ -0.62
LINC01040-201ENST00000425048 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
LINC01040-201ENST00000425048 DEPDC4Q8N2C3 294 aa11.18□□□□□ -0.62
LINC01040-201ENST00000425048 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
LINC01040-201ENST00000425048 USP17L5A8MUK1 530 aa11.17□□□□□ -0.62
LINC01040-201ENST00000425048 BAG6P46379 1132 aa11.17□□□□□ -0.62
LINC01040-201ENST00000425048 ZNF468Q5VIY5 522 aaPredicted RBP11.17□□□□□ -0.62
LINC01040-201ENST00000425048 FCHSD1Q86WN1 690 aa11.17□□□□□ -0.62
LINC01040-201ENST00000425048 ZDHHC1Q8WTX9 485 aa11.17□□□□□ -0.62
LINC01040-201ENST00000425048 PCBP4P57723 403 aaKnown RBP11.16□□□□□ -0.62
LINC01040-201ENST00000425048 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
LINC01040-201ENST00000425048 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
LINC01040-201ENST00000425048 EFSO43281 561 aa11.15□□□□□ -0.62
LINC01040-201ENST00000425048 EPHA4P54764 986 aa11.15□□□□□ -0.62
LINC01040-201ENST00000425048 FLIIQ13045 1269 aa11.15□□□□□ -0.62
LINC01040-201ENST00000425048 SLC9A9Q8IVB4 645 aa11.15□□□□□ -0.62
LINC01040-201ENST00000425048 STRN4Q9NRL3 753 aa11.15□□□□□ -0.62
LINC01040-201ENST00000425048 EML1O00423 815 aa11.14□□□□□ -0.63
LINC01040-201ENST00000425048 LRRC69Q6ZNQ3 347 aa11.14□□□□□ -0.63
LINC01040-201ENST00000425048 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
LINC01040-201ENST00000425048 SERTM1A2A2V5 107 aa11.13□□□□□ -0.63
LINC01040-201ENST00000425048 K7ELQ4 463 aaPredicted RBP11.13□□□□□ -0.63
LINC01040-201ENST00000425048 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
LINC01040-201ENST00000425048 UBTFP17480 764 aaKnown RBP11.13□□□□□ -0.63
LINC01040-201ENST00000425048 ATP1A2P50993 1020 aa11.13□□□□□ -0.63
LINC01040-201ENST00000425048 C1QTNF9BB2RNN3 333 aa11.12□□□□□ -0.63
LINC01040-201ENST00000425048 ALAS2P22557 587 aa11.12□□□□□ -0.63
LINC01040-201ENST00000425048 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
LINC01040-201ENST00000425048 HDGFL1Q5TGJ6 251 aa11.12□□□□□ -0.63
LINC01040-201ENST00000425048 CCDC102BQ68D86 513 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms