RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CHPF2Q9P2E5 772 aa19■□□□□ 0.63
CALD1-206ENST00000424922 THSD7AQ9UPZ6 1657 aa18.99■□□□□ 0.63
CALD1-206ENST00000424922 SYTL4Q96C24 671 aaPredicted RBP18.99■□□□□ 0.63
CALD1-206ENST00000424922 TRPC5Q9UL62 973 aaPredicted RBP18.99■□□□□ 0.63
CALD1-206ENST00000424922 ABCC4O15439 1325 aa18.99■□□□□ 0.63
CALD1-206ENST00000424922 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
CALD1-206ENST00000424922 RGS12O14924 1447 aa18.99■□□□□ 0.63
CALD1-206ENST00000424922 ATRNO75882 1429 aa18.99■□□□□ 0.63
CALD1-206ENST00000424922 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
CALD1-206ENST00000424922 FLIIQ13045 1269 aa18.98■□□□□ 0.63
CALD1-206ENST00000424922 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
CALD1-206ENST00000424922 BCL9O00512 1426 aa18.97■□□□□ 0.63
CALD1-206ENST00000424922 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
CALD1-206ENST00000424922 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
CALD1-206ENST00000424922 DDX19BQ9UMR2 479 aa18.97■□□□□ 0.63
CALD1-206ENST00000424922 PTCD1O75127 700 aaKnown RBP18.97■□□□□ 0.63
CALD1-206ENST00000424922 ANXA1P04083 346 aa18.97■□□□□ 0.63
CALD1-206ENST00000424922 DBF4Q9UBU7 674 aaPredicted RBP18.97■□□□□ 0.63
CALD1-206ENST00000424922 ASAP1Q9ULH1 1129 aa18.97■□□□□ 0.63
CALD1-206ENST00000424922 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
CALD1-206ENST00000424922 FKBP5Q13451 457 aaPredicted RBP18.96■□□□□ 0.63
CALD1-206ENST00000424922 QTRT2Q9H974 415 aaKnown RBP18.96■□□□□ 0.63
CALD1-206ENST00000424922 USP16Q9Y5T5 823 aa18.96■□□□□ 0.63
CALD1-206ENST00000424922 ACSBG1Q96GR2 724 aa18.95■□□□□ 0.62
CALD1-206ENST00000424922 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
CALD1-206ENST00000424922 UBE2Q2Q8WVN8 375 aa18.95■□□□□ 0.62
CALD1-206ENST00000424922 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
CALD1-206ENST00000424922 F6X3S4 739 aa18.94■□□□□ 0.62
CALD1-206ENST00000424922 PROSER3Q2NL68 480 aa18.94■□□□□ 0.62
CALD1-206ENST00000424922 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
CALD1-206ENST00000424922 INTS3Q68E01 1043 aaKnown RBP18.92■□□□□ 0.62
CALD1-206ENST00000424922 SLC4A10Q6U841 1118 aa18.92■□□□□ 0.62
CALD1-206ENST00000424922 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
CALD1-206ENST00000424922 PDIA6Q15084 440 aa18.92■□□□□ 0.62
CALD1-206ENST00000424922 N4BP2Q86UW6 1770 aaPredicted RBP18.92■□□□□ 0.62
CALD1-206ENST00000424922 ONECUT3O60422 494 aaPredicted RBP18.91■□□□□ 0.62
CALD1-206ENST00000424922 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
CALD1-206ENST00000424922 FBXO41Q8TF61 875 aa18.91■□□□□ 0.62
CALD1-206ENST00000424922 RBM42Q9BTD8 480 aaKnown RBP18.91■□□□□ 0.62
CALD1-206ENST00000424922 ZBTB7BO15156 539 aaPredicted RBP18.9■□□□□ 0.62
CALD1-206ENST00000424922 MYL6BP14649 208 aa18.9■□□□□ 0.62
CALD1-206ENST00000424922 ZBTB40Q9NUA8 1239 aa18.9■□□□□ 0.62
CALD1-206ENST00000424922 PIP4K2AP48426 406 aaPredicted RBP18.89■□□□□ 0.62
CALD1-206ENST00000424922 SEPT12Q8IYM1 358 aa18.89■□□□□ 0.62
CALD1-206ENST00000424922 PCDHB15Q9Y5E8 787 aa18.89■□□□□ 0.62
CALD1-206ENST00000424922 BRWD3Q6RI45 1802 aa18.89■□□□□ 0.61
CALD1-206ENST00000424922 KCNQ2O43526 872 aa18.89■□□□□ 0.61
CALD1-206ENST00000424922 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
CALD1-206ENST00000424922 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
CALD1-206ENST00000424922 AIMP1Q12904 312 aaKnown RBP18.88■□□□□ 0.61
CALD1-206ENST00000424922 VSIG10Q8N0Z9 540 aa18.88■□□□□ 0.61
CALD1-206ENST00000424922 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
CALD1-206ENST00000424922 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
CALD1-206ENST00000424922 CCT4P50991 539 aaKnown RBP18.87■□□□□ 0.61
CALD1-206ENST00000424922 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
CALD1-206ENST00000424922 ZNF772Q68DY9 489 aaPredicted RBP18.86■□□□□ 0.61
CALD1-206ENST00000424922 A1BGP04217 495 aa18.86■□□□□ 0.61
CALD1-206ENST00000424922 DNAJC10Q8IXB1 793 aa18.86■□□□□ 0.61
CALD1-206ENST00000424922 ADCY9O60503 1353 aa18.86■□□□□ 0.61
CALD1-206ENST00000424922 PXDNLA1KZ92 1463 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 TJP1Q07157 1748 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 DNAAF4Q8WXU2 420 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 BTAF1O14981 1849 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 IGHDP01880 384 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 NBPF14Q5TI25 921 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
CALD1-206ENST00000424922 LRP10Q7Z4F1 713 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 XAGE3Q8WTP9 111 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 TEX13AQ9BXU3 409 aaPredicted RBP18.85■□□□□ 0.61
CALD1-206ENST00000424922 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
CALD1-206ENST00000424922 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
CALD1-206ENST00000424922 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
CALD1-206ENST00000424922 C1orf115Q9H7X2 142 aa18.84■□□□□ 0.61
CALD1-206ENST00000424922 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
CALD1-206ENST00000424922 MAP3K2Q9Y2U5 619 aa18.84■□□□□ 0.61
CALD1-206ENST00000424922 NHSQ6T4R5 1651 aa18.84■□□□□ 0.61
CALD1-206ENST00000424922 DDX58O95786 925 aaKnown RBP18.83■□□□□ 0.61
CALD1-206ENST00000424922 FAM161AQ3B820 660 aa18.83■□□□□ 0.61
CALD1-206ENST00000424922 SKAP1Q86WV1 359 aa18.83■□□□□ 0.61
CALD1-206ENST00000424922 STARD3NLO95772 234 aa18.82■□□□□ 0.6
CALD1-206ENST00000424922 PTF1AQ7RTS3 328 aa18.82■□□□□ 0.6
CALD1-206ENST00000424922 MEIS3Q99687 375 aa18.82■□□□□ 0.6
CALD1-206ENST00000424922 ARFGEF2Q9Y6D5 1785 aa18.82■□□□□ 0.6
CALD1-206ENST00000424922 PALLDQ8WX93 1383 aa18.82■□□□□ 0.6
CALD1-206ENST00000424922 RBM6P78332 1123 aaKnown RBP18.81■□□□□ 0.6
CALD1-206ENST00000424922 SRCIN1Q9C0H9 1055 aa18.81■□□□□ 0.6
CALD1-206ENST00000424922 BEND3Q5T5X7 828 aa18.8■□□□□ 0.6
CALD1-206ENST00000424922 RIC3Q7Z5B4 369 aa18.8■□□□□ 0.6
CALD1-206ENST00000424922 SMARCC1Q92922 1105 aaPredicted RBP18.8■□□□□ 0.6
CALD1-206ENST00000424922 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
CALD1-206ENST00000424922 LOC102724428A0A0B4J2F2 783 aa18.8■□□□□ 0.6
CALD1-206ENST00000424922 SIK1P57059 783 aa18.8■□□□□ 0.6
CALD1-206ENST00000424922 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
CALD1-206ENST00000424922 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
CALD1-206ENST00000424922 ATP6V1AP38606 617 aa18.79■□□□□ 0.6
CALD1-206ENST00000424922 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
CALD1-206ENST00000424922 ATP10DQ9P241 1426 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms