RNA–Protein interactions for RNA: ENST00000423063.2

FARP1-203, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-203ENST00000423063 CC2D1BQ5T0F9 858 aaKnown RBP13.27□□□□□ -0.29
FARP1-203ENST00000423063 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
FARP1-203ENST00000423063 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
FARP1-203ENST00000423063 MTHFSP49914 203 aa13.26□□□□□ -0.29
FARP1-203ENST00000423063 GOLGA2Q08379 1002 aa13.26□□□□□ -0.29
FARP1-203ENST00000423063 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
FARP1-203ENST00000423063 KDRP35968 1356 aa13.25□□□□□ -0.29
FARP1-203ENST00000423063 GRIN3BO60391 1043 aa13.25□□□□□ -0.29
FARP1-203ENST00000423063 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
FARP1-203ENST00000423063 PHF14O94880 888 aa13.25□□□□□ -0.29
FARP1-203ENST00000423063 IL13P35225 146 aa13.25□□□□□ -0.29
FARP1-203ENST00000423063 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
FARP1-203ENST00000423063 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
FARP1-203ENST00000423063 AK7Q96M32 723 aa13.25□□□□□ -0.29
FARP1-203ENST00000423063 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
FARP1-203ENST00000423063 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
FARP1-203ENST00000423063 FLAD1Q8NFF5 587 aa13.24□□□□□ -0.29
FARP1-203ENST00000423063 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
FARP1-203ENST00000423063 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
FARP1-203ENST00000423063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
FARP1-203ENST00000423063 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
FARP1-203ENST00000423063 SIK1P57059 783 aa13.23□□□□□ -0.29
FARP1-203ENST00000423063 ITPK1Q13572 414 aa13.23□□□□□ -0.29
FARP1-203ENST00000423063 WWC3Q9ULE0 1092 aa13.23□□□□□ -0.29
FARP1-203ENST00000423063 DIAPH1O60610 1272 aaKnown RBP13.22□□□□□ -0.29
FARP1-203ENST00000423063 PHKG2P15735 406 aa13.22□□□□□ -0.29
FARP1-203ENST00000423063 PSEN1P49768 467 aa13.22□□□□□ -0.29
FARP1-203ENST00000423063 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
FARP1-203ENST00000423063 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
FARP1-203ENST00000423063 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
FARP1-203ENST00000423063 HSP90AB1P08238 724 aaKnown RBP13.21□□□□□ -0.29
FARP1-203ENST00000423063 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.29
FARP1-203ENST00000423063 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
FARP1-203ENST00000423063 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 SSFA2P28290 1259 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 CFAP53Q96M91 514 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 ADCY9O60503 1353 aa13.2□□□□□ -0.3
FARP1-203ENST00000423063 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
FARP1-203ENST00000423063 GNPATO15228 680 aa13.19□□□□□ -0.3
FARP1-203ENST00000423063 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
FARP1-203ENST00000423063 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
FARP1-203ENST00000423063 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
FARP1-203ENST00000423063 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
FARP1-203ENST00000423063 MYH14Q7Z406 1995 aaKnown RBP13.19□□□□□ -0.3
FARP1-203ENST00000423063 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
FARP1-203ENST00000423063 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
FARP1-203ENST00000423063 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
FARP1-203ENST00000423063 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
FARP1-203ENST00000423063 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
FARP1-203ENST00000423063 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
FARP1-203ENST00000423063 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
FARP1-203ENST00000423063 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
FARP1-203ENST00000423063 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
FARP1-203ENST00000423063 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
FARP1-203ENST00000423063 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
FARP1-203ENST00000423063 ZNF831Q5JPB2 1677 aa13.15□□□□□ -0.3
FARP1-203ENST00000423063 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
FARP1-203ENST00000423063 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
FARP1-203ENST00000423063 MMP10P09238 476 aa13.15□□□□□ -0.3
FARP1-203ENST00000423063 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
FARP1-203ENST00000423063 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
FARP1-203ENST00000423063 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
FARP1-203ENST00000423063 RALBP1Q15311 655 aa13.14□□□□□ -0.31
FARP1-203ENST00000423063 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
FARP1-203ENST00000423063 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
FARP1-203ENST00000423063 PXDNLA1KZ92 1463 aa13.14□□□□□ -0.31
FARP1-203ENST00000423063 BRCA1P38398 1863 aaKnown RBP13.13□□□□□ -0.31
FARP1-203ENST00000423063 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
FARP1-203ENST00000423063 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
FARP1-203ENST00000423063 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
FARP1-203ENST00000423063 U2SURPO15042 1029 aaKnown RBP13.12□□□□□ -0.31
FARP1-203ENST00000423063 HMOX1P09601 288 aa13.12□□□□□ -0.31
FARP1-203ENST00000423063 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
FARP1-203ENST00000423063 LCE2DQ5TA82 110 aaPredicted RBP13.12□□□□□ -0.31
FARP1-203ENST00000423063 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
FARP1-203ENST00000423063 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
FARP1-203ENST00000423063 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
FARP1-203ENST00000423063 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
FARP1-203ENST00000423063 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
FARP1-203ENST00000423063 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
FARP1-203ENST00000423063 TJP1Q07157 1748 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 SCN11AQ9UI33 1791 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 FCHSD2O94868 740 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 GYS1P13807 737 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 CABP4P57796 275 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
FARP1-203ENST00000423063 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
FARP1-203ENST00000423063 KIF3CO14782 793 aa13.09□□□□□ -0.31
FARP1-203ENST00000423063 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
FARP1-203ENST00000423063 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
FARP1-203ENST00000423063 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
FARP1-203ENST00000423063 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
FARP1-203ENST00000423063 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
FARP1-203ENST00000423063 DPEP1P16444 411 aa13.08□□□□□ -0.32
FARP1-203ENST00000423063 HSPA6P17066 643 aa13.08□□□□□ -0.32
FARP1-203ENST00000423063 TGFB2P61812 414 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms