RNA–Protein interactions for RNA: ENST00000422944.1

HCG20-207, Transcript of HLA complex group 20, humanhuman

TSL 2

Gene HCG20, Length 1,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-207ENST00000422944 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
HCG20-207ENST00000422944 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.36
HCG20-207ENST00000422944 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
HCG20-207ENST00000422944 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
HCG20-207ENST00000422944 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
HCG20-207ENST00000422944 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
HCG20-207ENST00000422944 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
HCG20-207ENST00000422944 TXNRD1Q16881 649 aa12.76□□□□□ -0.37
HCG20-207ENST00000422944 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
HCG20-207ENST00000422944 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
HCG20-207ENST00000422944 LY75O60449 1722 aa12.76□□□□□ -0.37
HCG20-207ENST00000422944 LAMB4A4D0S4 1761 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
HCG20-207ENST00000422944 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 PTPRCP08575 1304 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
HCG20-207ENST00000422944 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
HCG20-207ENST00000422944 A0A087WZG4 1122 aa12.74□□□□□ -0.37
HCG20-207ENST00000422944 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
HCG20-207ENST00000422944 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
HCG20-207ENST00000422944 RGL2O15211 777 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
HCG20-207ENST00000422944 CRKLP46109 303 aaKnown RBP12.73□□□□□ -0.37
HCG20-207ENST00000422944 ITPK1Q13572 414 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
HCG20-207ENST00000422944 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 AK7Q96M32 723 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
HCG20-207ENST00000422944 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 C5P01031 1676 aa12.73□□□□□ -0.37
HCG20-207ENST00000422944 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
HCG20-207ENST00000422944 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
HCG20-207ENST00000422944 A1BGP04217 495 aa12.72□□□□□ -0.37
HCG20-207ENST00000422944 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
HCG20-207ENST00000422944 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
HCG20-207ENST00000422944 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
HCG20-207ENST00000422944 NBPF14Q5TI25 921 aa12.71□□□□□ -0.37
HCG20-207ENST00000422944 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
HCG20-207ENST00000422944 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
HCG20-207ENST00000422944 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
HCG20-207ENST00000422944 TJP1Q07157 1748 aa12.71□□□□□ -0.38
HCG20-207ENST00000422944 MYL6BP14649 208 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 SSFA2P28290 1259 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
HCG20-207ENST00000422944 FLIIQ13045 1269 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 FKBP5Q13451 457 aaPredicted RBP12.7□□□□□ -0.38
HCG20-207ENST00000422944 PDIA6Q15084 440 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 INTS5Q6P9B9 1019 aaKnown RBP12.7□□□□□ -0.38
HCG20-207ENST00000422944 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 PROM2Q8N271 834 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
HCG20-207ENST00000422944 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
HCG20-207ENST00000422944 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 BCAR3O75815 825 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
HCG20-207ENST00000422944 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
HCG20-207ENST00000422944 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 FRAT1Q92837 279 aaPredicted RBP12.69□□□□□ -0.38
HCG20-207ENST00000422944 CHMP4BQ9H444 224 aaKnown RBP12.69□□□□□ -0.38
HCG20-207ENST00000422944 STK32BQ9NY57 414 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 NOB1Q9ULX3 412 aaKnown RBP12.69□□□□□ -0.38
HCG20-207ENST00000422944 ZNF652Q9Y2D9 606 aa12.69□□□□□ -0.38
HCG20-207ENST00000422944 TAF1LQ8IZX4 1826 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 ERVV-1B6SEH8 477 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 GNPATO15228 680 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
HCG20-207ENST00000422944 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 FTSJ3Q8IY81 847 aaKnown RBP12.68□□□□□ -0.38
HCG20-207ENST00000422944 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
HCG20-207ENST00000422944 RREB1Q92766 1687 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 RNF123Q5XPI4 1314 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 TCERG1O14776 1098 aaKnown RBP12.67□□□□□ -0.38
HCG20-207ENST00000422944 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 LRP10Q7Z4F1 713 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 TFCP2L1Q9NZI6 479 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
HCG20-207ENST00000422944 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
HCG20-207ENST00000422944 EP400Q96L91 3159 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 COL15A1P39059 1388 aa12.67□□□□□ -0.38
HCG20-207ENST00000422944 ZPR1O75312 459 aa12.66□□□□□ -0.38
HCG20-207ENST00000422944 NEFLP07196 543 aa12.66□□□□□ -0.38
HCG20-207ENST00000422944 RFC4P35249 363 aa12.66□□□□□ -0.38
HCG20-207ENST00000422944 CCT4P50991 539 aaKnown RBP12.66□□□□□ -0.38
HCG20-207ENST00000422944 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms