RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 MEGF6O75095 1541 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
CDCA3-202ENST00000422785 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
CDCA3-202ENST00000422785 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
CDCA3-202ENST00000422785 KDM6AO15550 1401 aaPredicted RBP16.97■□□□□ 0.31
CDCA3-202ENST00000422785 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
CDCA3-202ENST00000422785 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
CDCA3-202ENST00000422785 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
CDCA3-202ENST00000422785 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 REC8O95072 547 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 DDIT3P35638 169 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
CDCA3-202ENST00000422785 HSP90AB1P08238 724 aaKnown RBP16.95■□□□□ 0.3
CDCA3-202ENST00000422785 MAP3K2Q9Y2U5 619 aa16.95■□□□□ 0.3
CDCA3-202ENST00000422785 AOX1Q06278 1338 aa16.95■□□□□ 0.3
CDCA3-202ENST00000422785 BRINP3Q76B58 766 aa16.95■□□□□ 0.3
CDCA3-202ENST00000422785 DDX21Q9NR30 783 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDCA3-202ENST00000422785 ERC2O15083 957 aa16.94■□□□□ 0.3
CDCA3-202ENST00000422785 SRGAP3O43295 1099 aa16.94■□□□□ 0.3
CDCA3-202ENST00000422785 RABEP1Q15276 862 aa16.94■□□□□ 0.3
CDCA3-202ENST00000422785 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
CDCA3-202ENST00000422785 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
CDCA3-202ENST00000422785 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
CDCA3-202ENST00000422785 CD2BP2O95400 341 aaKnown RBP16.94■□□□□ 0.3
CDCA3-202ENST00000422785 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
CDCA3-202ENST00000422785 MTX1Q13505 466 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 TSHZ3Q63HK5 1081 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 PKD1L3Q7Z443 1732 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 MRC1P22897 1456 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
CDCA3-202ENST00000422785 PDIA6Q15084 440 aa16.93■□□□□ 0.3
CDCA3-202ENST00000422785 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
CDCA3-202ENST00000422785 CIZ1Q9ULV3 898 aaPredicted RBP16.92■□□□□ 0.3
CDCA3-202ENST00000422785 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
CDCA3-202ENST00000422785 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
CDCA3-202ENST00000422785 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
CDCA3-202ENST00000422785 CYP27B1O15528 508 aa16.91■□□□□ 0.3
CDCA3-202ENST00000422785 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
CDCA3-202ENST00000422785 STRCQ7RTU9 1775 aa16.91■□□□□ 0.3
CDCA3-202ENST00000422785 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
CDCA3-202ENST00000422785 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
CDCA3-202ENST00000422785 C5P01031 1676 aa16.91■□□□□ 0.3
CDCA3-202ENST00000422785 MCM4P33991 863 aa16.89■□□□□ 0.3
CDCA3-202ENST00000422785 ESYT1Q9BSJ8 1104 aa16.89■□□□□ 0.29
CDCA3-202ENST00000422785 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
CDCA3-202ENST00000422785 UTYO14607 1347 aa16.89■□□□□ 0.29
CDCA3-202ENST00000422785 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
CDCA3-202ENST00000422785 TRIM6-TRIM34B2RNG4 842 aa16.89■□□□□ 0.29
CDCA3-202ENST00000422785 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
CDCA3-202ENST00000422785 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
CDCA3-202ENST00000422785 SLAIN2Q9P270 581 aa16.89■□□□□ 0.29
CDCA3-202ENST00000422785 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
CDCA3-202ENST00000422785 CHMLP26374 656 aa16.88■□□□□ 0.29
CDCA3-202ENST00000422785 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
CDCA3-202ENST00000422785 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
CDCA3-202ENST00000422785 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
CDCA3-202ENST00000422785 AIMP1Q12904 312 aaKnown RBP16.88■□□□□ 0.29
CDCA3-202ENST00000422785 TTC5Q8N0Z6 440 aa16.88■□□□□ 0.29
CDCA3-202ENST00000422785 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
CDCA3-202ENST00000422785 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
CDCA3-202ENST00000422785 GRM8O00222 908 aa16.87■□□□□ 0.29
CDCA3-202ENST00000422785 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
CDCA3-202ENST00000422785 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
CDCA3-202ENST00000422785 PI4K2BQ8TCG2 481 aa16.86■□□□□ 0.29
CDCA3-202ENST00000422785 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
CDCA3-202ENST00000422785 CABP4P57796 275 aa16.86■□□□□ 0.29
CDCA3-202ENST00000422785 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
CDCA3-202ENST00000422785 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
CDCA3-202ENST00000422785 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
CDCA3-202ENST00000422785 ST18O60284 1047 aa16.85■□□□□ 0.29
CDCA3-202ENST00000422785 ZNF335Q9H4Z2 1342 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-202ENST00000422785 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 MYL6BP14649 208 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-202ENST00000422785 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
CDCA3-202ENST00000422785 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
CDCA3-202ENST00000422785 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.29
CDCA3-202ENST00000422785 COPS6Q7L5N1 327 aa16.83■□□□□ 0.29
CDCA3-202ENST00000422785 LRP10Q7Z4F1 713 aa16.83■□□□□ 0.29
CDCA3-202ENST00000422785 KAZALD1Q96I82 304 aa16.83■□□□□ 0.29
CDCA3-202ENST00000422785 SUCLG2Q96I99 432 aa16.83■□□□□ 0.29
CDCA3-202ENST00000422785 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.29
CDCA3-202ENST00000422785 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
CDCA3-202ENST00000422785 TOM1L2Q6ZVM7 507 aa16.83■□□□□ 0.28
CDCA3-202ENST00000422785 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
CDCA3-202ENST00000422785 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms