RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
SEMA4D-208ENST00000422704 USP25Q9UHP3 1055 aa12.56□□□□□ -0.4
SEMA4D-208ENST00000422704 SEC24BO95487 1268 aa12.56□□□□□ -0.4
SEMA4D-208ENST00000422704 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
SEMA4D-208ENST00000422704 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
SEMA4D-208ENST00000422704 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 CCDC70Q6NSX1 233 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 RLBP1P12271 317 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 MYO3AQ8NEV4 1616 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 GNAT3A8MTJ3 354 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 ERC1Q8IUD2 1116 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
SEMA4D-208ENST00000422704 SYNMO15061 1565 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 RAB11FIP3O75154 756 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 HSP90B2PQ58FF3 399 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 CAGE1Q8TC20 777 aa12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
SEMA4D-208ENST00000422704 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 ZBTB9Q96C00 473 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 SIGLEC1Q9BZZ2 1709 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 THEMISQ8N1K5 641 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 CCDC43Q96MW1 224 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 MEIS3Q99687 375 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 LRPPRCP42704 1394 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 XBP1P17861 261 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 CCDC112Q8NEF3 446 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 ISM2Q6H9L7 571 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-208ENST00000422704 ARHGEF40Q8TER5 1519 aa12.52□□□□□ -0.4
SEMA4D-208ENST00000422704 KIF13AQ9H1H9 1805 aa12.52□□□□□ -0.4
SEMA4D-208ENST00000422704 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.4
SEMA4D-208ENST00000422704 MBIPQ9NS73 344 aa12.52□□□□□ -0.4
SEMA4D-208ENST00000422704 PREX1Q8TCU6 1659 aa12.52□□□□□ -0.4
SEMA4D-208ENST00000422704 HIP1O00291 1037 aa12.52□□□□□ -0.41
SEMA4D-208ENST00000422704 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.41
SEMA4D-208ENST00000422704 SSBP05455 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEMA4D-208ENST00000422704 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.41
SEMA4D-208ENST00000422704 MYD88Q99836 296 aa12.52□□□□□ -0.41
SEMA4D-208ENST00000422704 PI4KAP2A4QPH2 592 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 BIN1O00499 593 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 FLIIQ13045 1269 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 KLHL10Q6JEL2 608 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 PI4KAP1Q8N8J0 262 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 TRMT1Q9NXH9 659 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 DHX8Q14562 1220 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 ZFYVE9O95405 1425 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 TDO2P48775 406 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 HMGN5P82970 282 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 RUFY1Q96T51 708 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-208ENST00000422704 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 EPS15P42566 896 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 HAND2P61296 217 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 LETM1O95202 739 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 NECAB1Q8N987 351 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 TBC1D32Q96NH3 1257 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 LRP2BPQ9P2M1 347 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 GPTP24298 496 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
SEMA4D-208ENST00000422704 NEXMIFQ5QGS0 1516 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 CFAP100Q494V2 611 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 TRIM22Q8IYM9 498 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 PPP1R42Q7Z4L9 355 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 C8orf58Q8NAV2 365 aa12.49□□□□□ -0.41
SEMA4D-208ENST00000422704 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 AXDND1Q5T1B0 1012 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 CCDC144CPQ8IYA2 1237 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms