RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ZNF496Q96IT1 587 aaPredicted RBP11.43□□□□□ -0.58
MDC1-204ENST00000422266 VIRMAQ69YN4 1812 aaKnown RBP11.43□□□□□ -0.58
MDC1-204ENST00000422266 TJP1Q07157 1748 aa11.43□□□□□ -0.58
MDC1-204ENST00000422266 MYH14Q7Z406 1995 aaKnown RBP11.43□□□□□ -0.58
MDC1-204ENST00000422266 IL6STP40189 918 aaPredicted RBP11.42□□□□□ -0.58
MDC1-204ENST00000422266 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
MDC1-204ENST00000422266 ZBTB1Q9Y2K1 713 aa11.42□□□□□ -0.58
MDC1-204ENST00000422266 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
MDC1-204ENST00000422266 CANXP27824 592 aaKnown RBP11.41□□□□□ -0.58
MDC1-204ENST00000422266 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
MDC1-204ENST00000422266 FKBP8Q14318 412 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 MCM10Q7L590 875 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 ZNF784Q8NCA9 323 aaPredicted RBP11.41□□□□□ -0.58
MDC1-204ENST00000422266 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 C10orf71Q711Q0 1435 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
MDC1-204ENST00000422266 RGL2O15211 777 aa11.4□□□□□ -0.58
MDC1-204ENST00000422266 TM4SF1P30408 202 aa11.4□□□□□ -0.58
MDC1-204ENST00000422266 WDR43Q15061 677 aaKnown RBP eCLIP11.4□□□□□ -0.58
MDC1-204ENST00000422266 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.58
MDC1-204ENST00000422266 SRP68Q9UHB9 627 aaKnown RBP11.4□□□□□ -0.58
MDC1-204ENST00000422266 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
MDC1-204ENST00000422266 POLRMTO00411 1230 aaKnown RBP11.39□□□□□ -0.59
MDC1-204ENST00000422266 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
MDC1-204ENST00000422266 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
MDC1-204ENST00000422266 ZNF652Q9Y2D9 606 aa11.39□□□□□ -0.59
MDC1-204ENST00000422266 SIPA1L3O60292 1781 aaPredicted RBP11.39□□□□□ -0.59
MDC1-204ENST00000422266 KIF13BQ9NQT8 1826 aa11.38□□□□□ -0.59
MDC1-204ENST00000422266 CLEC4GQ6UXB4 293 aa11.38□□□□□ -0.59
MDC1-204ENST00000422266 GOLGB1Q14789 3259 aaKnown RBP11.38□□□□□ -0.59
MDC1-204ENST00000422266 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
MDC1-204ENST00000422266 NPHP1O15259 732 aa11.37□□□□□ -0.59
MDC1-204ENST00000422266 NFIXQ14938 502 aa11.37□□□□□ -0.59
MDC1-204ENST00000422266 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
MDC1-204ENST00000422266 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
MDC1-204ENST00000422266 A0A0G2JLW4 131 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 A1BGP04217 495 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 SERPINB2P05120 415 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 DPEP1P16444 411 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 RIPK4P57078 832 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 DDR1Q08345 913 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 DCTN1Q14203 1278 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 DALRD3Q5D0E6 543 aaKnown RBP11.36□□□□□ -0.59
MDC1-204ENST00000422266 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
MDC1-204ENST00000422266 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 CARMIL3Q8ND23 1372 aa11.36□□□□□ -0.59
MDC1-204ENST00000422266 PDE6BP35913 854 aa11.35□□□□□ -0.59
MDC1-204ENST00000422266 PRKRIP1Q9H875 184 aaPredicted RBP11.35□□□□□ -0.59
MDC1-204ENST00000422266 H0YIN7 160 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 KCNQ3O43525 872 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
MDC1-204ENST00000422266 TMPOP42166 694 aaKnown RBP11.34□□□□□ -0.59
MDC1-204ENST00000422266 ST5P78524 1137 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 RUNDC1Q96C34 613 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 TSPYL4Q9UJ04 414 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 TBC1D2BQ9UPU7 963 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 ERBB4Q15303 1308 aa11.34□□□□□ -0.59
MDC1-204ENST00000422266 CAMTA2O94983 1202 aa11.33□□□□□ -0.6
MDC1-204ENST00000422266 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
MDC1-204ENST00000422266 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
MDC1-204ENST00000422266 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
MDC1-204ENST00000422266 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
MDC1-204ENST00000422266 KCNA3P22001 575 aa11.32□□□□□ -0.6
MDC1-204ENST00000422266 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
MDC1-204ENST00000422266 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
MDC1-204ENST00000422266 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
MDC1-204ENST00000422266 TTLL6Q8N841 843 aa11.32□□□□□ -0.6
MDC1-204ENST00000422266 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
MDC1-204ENST00000422266 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
MDC1-204ENST00000422266 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
MDC1-204ENST00000422266 KIF6Q6ZMV9 814 aa11.31□□□□□ -0.6
MDC1-204ENST00000422266 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
MDC1-204ENST00000422266 WWC3Q9ULE0 1092 aa11.31□□□□□ -0.6
MDC1-204ENST00000422266 ADCY9O60503 1353 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 NRXN2Q9P2S2 1712 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 CHRNA5P30532 468 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 SOGA3Q5TF21 947 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
MDC1-204ENST00000422266 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 DLG5Q8TDM6 1919 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 N4BP2Q86UW6 1770 aaPredicted RBP11.3□□□□□ -0.6
MDC1-204ENST00000422266 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
MDC1-204ENST00000422266 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
MDC1-204ENST00000422266 PRAMEF22A3QJZ6 481 aa11.29□□□□□ -0.6
MDC1-204ENST00000422266 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
MDC1-204ENST00000422266 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
MDC1-204ENST00000422266 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
MDC1-204ENST00000422266 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
MDC1-204ENST00000422266 ADAMTS8Q9UP79 889 aa11.29□□□□□ -0.6
MDC1-204ENST00000422266 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
MDC1-204ENST00000422266 KIAA1551Q9HCM1 1747 aa11.29□□□□□ -0.6
MDC1-204ENST00000422266 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
MDC1-204ENST00000422266 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms