RNA–Protein interactions for RNA: ENST00000422064.1

PMS2P3-203, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5 BASIC

Gene PMS2P3, Length 567 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-203ENST00000422064 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 BECN1Q14457 450 aa8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 VSIG10Q8N0Z9 540 aa8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 PIGBQ92521 554 aa8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 UBR2Q8IWV8 1755 aa8.6□□□□□ -1.03
PMS2P3-203ENST00000422064 ZNF831Q5JPB2 1677 aa8.59□□□□□ -1.03
PMS2P3-203ENST00000422064 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
PMS2P3-203ENST00000422064 TEX13AQ9BXU3 409 aaPredicted RBP8.59□□□□□ -1.03
PMS2P3-203ENST00000422064 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
PMS2P3-203ENST00000422064 RTN4Q9NQC3 1192 aaKnown RBP8.59□□□□□ -1.03
PMS2P3-203ENST00000422064 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 KCNQ2O43526 872 aa8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 EN1Q05925 392 aaPredicted RBP8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 AAMPQ13685 434 aa8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 TTC5Q8N0Z6 440 aa8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 EXOC6Q8TAG9 804 aa8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 FRAT1Q92837 279 aaPredicted RBP8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
PMS2P3-203ENST00000422064 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 VAMP4O75379 141 aa8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 TSR2Q969E8 191 aaKnown RBP8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 ATG3Q9NT62 314 aa8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 WWC3Q9ULE0 1092 aa8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 ISY1Q9ULR0 285 aaKnown RBP8.57□□□□□ -1.04
PMS2P3-203ENST00000422064 EP400Q96L91 3159 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 KCPQ6ZWJ8 1503 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 PLSCR1O15162 318 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 RRP9O43818 475 aaKnown RBP8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 TWISTNBQ3B726 338 aaPredicted RBP8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 C8orf58Q8NAV2 365 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 ACSBG1Q96GR2 724 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 ZNF496Q96IT1 587 aaPredicted RBP8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 BTAF1O14981 1849 aa8.56□□□□□ -1.04
PMS2P3-203ENST00000422064 ERBB4Q15303 1308 aa8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 SLC39A6Q13433 755 aa8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 RGPD3A6NKT7 1758 aaPredicted RBP8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 RGPD4Q7Z3J3 1758 aa8.55□□□□□ -1.04
PMS2P3-203ENST00000422064 LY75O60449 1722 aa8.54□□□□□ -1.04
PMS2P3-203ENST00000422064 LAMB4A4D0S4 1761 aa8.54□□□□□ -1.04
PMS2P3-203ENST00000422064 PALLDQ8WX93 1383 aa8.54□□□□□ -1.04
PMS2P3-203ENST00000422064 KCNQ3O43525 872 aa8.54□□□□□ -1.04
PMS2P3-203ENST00000422064 RARSP54136 660 aaKnown RBP8.54□□□□□ -1.04
PMS2P3-203ENST00000422064 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
PMS2P3-203ENST00000422064 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 STARD3NLO95772 234 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 PTMSP20962 102 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 APLP1P51693 650 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 SIK1P57059 783 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 TSPYL6Q8N831 410 aa8.53□□□□□ -1.04
PMS2P3-203ENST00000422064 TNS1Q9HBL0 1735 aaKnown RBP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 TRIM37O94972 964 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 HSP90AA1P07900 732 aaKnown RBP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 KRT24Q2M2I5 525 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 HDGFL1Q5TGJ6 251 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 NBPF14Q5TI25 921 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 ARHGAP45Q92619 1136 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 STK31Q9BXU1 1019 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 UPF2Q9HAU5 1272 aaKnown RBP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 DDX21Q9NR30 783 aaKnown RBP eCLIP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 DBF4Q9UBU7 674 aaPredicted RBP8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 KIF16BQ96L93 1317 aa8.52□□□□□ -1.05
PMS2P3-203ENST00000422064 C5P01031 1676 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 ELL2O00472 640 aaPredicted RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 IPO8O15397 1037 aaKnown RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 CYP19A1P11511 503 aaPredicted RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 PIAS4Q8N2W9 510 aaPredicted RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 MRPL50Q8N5N7 158 aaKnown RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 DNAJC5GQ8N7S2 189 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 SSH1Q8WYL5 1049 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 SLC4A9Q96Q91 983 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 RBM42Q9BTD8 480 aaKnown RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 HYPKQ9NX55 129 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 USP16Q9Y5T5 823 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 TJP1Q07157 1748 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 PTPRCP08575 1304 aa8.51□□□□□ -1.05
PMS2P3-203ENST00000422064 RREB1Q92766 1687 aa8.5□□□□□ -1.05
PMS2P3-203ENST00000422064 RGL2O15211 777 aa8.5□□□□□ -1.05
PMS2P3-203ENST00000422064 ATP6V1AP38606 617 aa8.5□□□□□ -1.05
PMS2P3-203ENST00000422064 HSP90AA2PQ14568 343 aaPredicted RBP8.5□□□□□ -1.05
PMS2P3-203ENST00000422064 PDIA6Q15084 440 aa8.5□□□□□ -1.05
PMS2P3-203ENST00000422064 PTF1AQ7RTS3 328 aa8.5□□□□□ -1.05
PMS2P3-203ENST00000422064 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms