RNA–Protein interactions for RNA: ENST00000421496.5

GGCX-202, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-202ENST00000421496 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
GGCX-202ENST00000421496 TEX13AQ9BXU3 409 aaPredicted RBP15.08■□□□□ 0
GGCX-202ENST00000421496 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0
GGCX-202ENST00000421496 WWC3Q9ULE0 1092 aa15.08■□□□□ 0
GGCX-202ENST00000421496 PARP3Q9Y6F1 533 aa15.08■□□□□ 0
GGCX-202ENST00000421496 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
GGCX-202ENST00000421496 USP42Q9H9J4 1324 aaKnown RBP15.08■□□□□ 0
GGCX-202ENST00000421496 HEG1Q9ULI3 1381 aa15.08■□□□□ 0
GGCX-202ENST00000421496 USPL1Q5W0Q7 1092 aa15.07■□□□□ 0
GGCX-202ENST00000421496 MYBBP1AQ9BQG0 1328 aaKnown RBP15.07■□□□□ 0
GGCX-202ENST00000421496 GRIN3BO60391 1043 aa15.06■□□□□ 0
GGCX-202ENST00000421496 TAF7Q15545 349 aaPredicted RBP15.06■□□□□ 0
GGCX-202ENST00000421496 NFE2L2Q16236 605 aa15.05■□□□□ -0
GGCX-202ENST00000421496 MIS18AQ9NYP9 233 aa15.05■□□□□ -0
GGCX-202ENST00000421496 NARFQ9UHQ1 456 aa15.05■□□□□ -0
GGCX-202ENST00000421496 ZNF330Q9Y3S2 320 aaPredicted RBP15.05■□□□□ -0
GGCX-202ENST00000421496 USP16Q9Y5T5 823 aa15.05■□□□□ -0
GGCX-202ENST00000421496 MAPK8IP3Q9UPT6 1336 aa15.05■□□□□ -0
GGCX-202ENST00000421496 COL15A1P39059 1388 aa15.04■□□□□ -0
GGCX-202ENST00000421496 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
GGCX-202ENST00000421496 A1BGP04217 495 aa15.04■□□□□ -0
GGCX-202ENST00000421496 TM4SF1P30408 202 aa15.04■□□□□ -0
GGCX-202ENST00000421496 EIF5P55010 431 aaKnown RBP15.04■□□□□ -0
GGCX-202ENST00000421496 N4BP2Q86UW6 1770 aaPredicted RBP15.03■□□□□ -0
GGCX-202ENST00000421496 A0A0G2JLW4 131 aa15.03■□□□□ -0
GGCX-202ENST00000421496 PRAMEF22A3QJZ6 481 aa15.03■□□□□ -0
GGCX-202ENST00000421496 TGFB2P61812 414 aa15.03■□□□□ -0
GGCX-202ENST00000421496 DDR1Q08345 913 aa15.03■□□□□ -0
GGCX-202ENST00000421496 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
GGCX-202ENST00000421496 PRKRIP1Q9H875 184 aaPredicted RBP15.03■□□□□ -0
GGCX-202ENST00000421496 KIF13BQ9NQT8 1826 aa15.03■□□□□ -0
GGCX-202ENST00000421496 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
GGCX-202ENST00000421496 BCL2L12Q9HB09 334 aa15.02■□□□□ -0
GGCX-202ENST00000421496 TBC1D2BQ9UPU7 963 aa15.02■□□□□ -0
GGCX-202ENST00000421496 A0A087WZG4 1122 aa15.01□□□□□ -0.01
GGCX-202ENST00000421496 POLRMTO00411 1230 aaKnown RBP15.01□□□□□ -0.01
GGCX-202ENST00000421496 IL6STP40189 918 aaPredicted RBP15.01□□□□□ -0.01
GGCX-202ENST00000421496 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
GGCX-202ENST00000421496 RIPK4P57078 832 aa15.01□□□□□ -0.01
GGCX-202ENST00000421496 NFIXQ14938 502 aa15.01□□□□□ -0.01
GGCX-202ENST00000421496 NPM2Q86SE8 214 aaKnown RBP15.01□□□□□ -0.01
GGCX-202ENST00000421496 DPEP1P16444 411 aa15□□□□□ -0.01
GGCX-202ENST00000421496 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
GGCX-202ENST00000421496 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
GGCX-202ENST00000421496 CCDC146Q8IYE0 955 aa15□□□□□ -0.01
GGCX-202ENST00000421496 ZNF784Q8NCA9 323 aaPredicted RBP15□□□□□ -0.01
GGCX-202ENST00000421496 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
GGCX-202ENST00000421496 AFDNP55196 1824 aaKnown RBP14.99□□□□□ -0.01
GGCX-202ENST00000421496 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
GGCX-202ENST00000421496 PNISRQ8TF01 805 aaKnown RBP14.99□□□□□ -0.01
GGCX-202ENST00000421496 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
GGCX-202ENST00000421496 SERPINB2P05120 415 aa14.98□□□□□ -0.01
GGCX-202ENST00000421496 NEUROD2Q15784 382 aa14.98□□□□□ -0.01
GGCX-202ENST00000421496 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
GGCX-202ENST00000421496 BCS1LQ9Y276 419 aa14.98□□□□□ -0.01
GGCX-202ENST00000421496 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
GGCX-202ENST00000421496 KIAA1551Q9HCM1 1747 aa14.97□□□□□ -0.01
GGCX-202ENST00000421496 KCNA3P22001 575 aa14.97□□□□□ -0.01
GGCX-202ENST00000421496 TBC1D9BQ66K14 1250 aa14.97□□□□□ -0.01
GGCX-202ENST00000421496 DZIP3Q86Y13 1208 aaKnown RBP14.97□□□□□ -0.01
GGCX-202ENST00000421496 EIF4A1P60842 406 aaKnown RBP14.96□□□□□ -0.01
GGCX-202ENST00000421496 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
GGCX-202ENST00000421496 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
GGCX-202ENST00000421496 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
GGCX-202ENST00000421496 CAMTA2O94983 1202 aa14.95□□□□□ -0.02
GGCX-202ENST00000421496 CHRNA5P30532 468 aa14.95□□□□□ -0.02
GGCX-202ENST00000421496 NBPF10Q6P3W6 841 aaKnown RBP14.95□□□□□ -0.02
GGCX-202ENST00000421496 NBPF15Q8N660 670 aa14.95□□□□□ -0.02
GGCX-202ENST00000421496 PIM2Q9P1W9 311 aa14.95□□□□□ -0.02
GGCX-202ENST00000421496 KDM3BQ7LBC6 1761 aa14.95□□□□□ -0.02
GGCX-202ENST00000421496 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
GGCX-202ENST00000421496 LMOD3Q0VAK6 560 aa14.94□□□□□ -0.02
GGCX-202ENST00000421496 TSPYL4Q9UJ04 414 aa14.94□□□□□ -0.02
GGCX-202ENST00000421496 ARHGAP27Q6ZUM4 889 aa14.93□□□□□ -0.02
GGCX-202ENST00000421496 NGEFQ8N5V2 710 aa14.93□□□□□ -0.02
GGCX-202ENST00000421496 SETDB2Q96T68 719 aa14.93□□□□□ -0.02
GGCX-202ENST00000421496 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
GGCX-202ENST00000421496 CCDC24Q8N4L8 307 aa14.92□□□□□ -0.02
GGCX-202ENST00000421496 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
GGCX-202ENST00000421496 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
GGCX-202ENST00000421496 CLEC4GQ6UXB4 293 aa14.91□□□□□ -0.02
GGCX-202ENST00000421496 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
GGCX-202ENST00000421496 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
GGCX-202ENST00000421496 ARFGEF1Q9Y6D6 1849 aa14.9□□□□□ -0.02
GGCX-202ENST00000421496 NPHP1O15259 732 aa14.9□□□□□ -0.02
GGCX-202ENST00000421496 MYL6BP14649 208 aa14.9□□□□□ -0.02
GGCX-202ENST00000421496 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
GGCX-202ENST00000421496 PRR5LQ6MZQ0 368 aa14.9□□□□□ -0.02
GGCX-202ENST00000421496 CARMIL3Q8ND23 1372 aa14.89□□□□□ -0.03
GGCX-202ENST00000421496 LAMB4A4D0S4 1761 aa14.89□□□□□ -0.03
GGCX-202ENST00000421496 BCORQ6W2J9 1755 aa14.89□□□□□ -0.03
GGCX-202ENST00000421496 EIF2S2P20042 333 aaKnown RBP14.89□□□□□ -0.03
GGCX-202ENST00000421496 C2CD5Q86YS7 1000 aa14.89□□□□□ -0.03
GGCX-202ENST00000421496 BABAM1Q9NWV8 329 aa14.89□□□□□ -0.03
GGCX-202ENST00000421496 ZNF652Q9Y2D9 606 aa14.89□□□□□ -0.03
GGCX-202ENST00000421496 H0YIN7 160 aa14.88□□□□□ -0.03
GGCX-202ENST00000421496 APAF1O14727 1248 aa14.88□□□□□ -0.03
GGCX-202ENST00000421496 HLFQ16534 295 aa14.88□□□□□ -0.03
GGCX-202ENST00000421496 BRIP1Q9BX63 1249 aa14.88□□□□□ -0.03
GGCX-202ENST00000421496 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms