RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 STARD3NLO95772 234 aa27.5■■□□□ 1.99
ABCF3-202ENST00000421340 ATF7IPQ6VMQ6 1270 aa27.5■■□□□ 1.99
ABCF3-202ENST00000421340 PTF1AQ7RTS3 328 aa27.5■■□□□ 1.99
ABCF3-202ENST00000421340 NECTIN2Q92692 538 aa27.5■■□□□ 1.99
ABCF3-202ENST00000421340 CHPF2Q9P2E5 772 aa27.5■■□□□ 1.99
ABCF3-202ENST00000421340 PDIA6Q15084 440 aa27.49■■□□□ 1.99
ABCF3-202ENST00000421340 DNAJC10Q8IXB1 793 aa27.48■■□□□ 1.99
ABCF3-202ENST00000421340 API5Q9BZZ5 524 aaKnown RBP27.48■■□□□ 1.99
ABCF3-202ENST00000421340 SBF2Q86WG5 1849 aa27.48■■□□□ 1.99
ABCF3-202ENST00000421340 ATP6V1AP38606 617 aa27.46■■□□□ 1.99
ABCF3-202ENST00000421340 TRIM37O94972 964 aa27.45■■□□□ 1.98
ABCF3-202ENST00000421340 CYP19A1P11511 503 aaPredicted RBP27.45■■□□□ 1.98
ABCF3-202ENST00000421340 TRIM27P14373 513 aa27.45■■□□□ 1.98
ABCF3-202ENST00000421340 FLIIQ13045 1269 aa27.45■■□□□ 1.98
ABCF3-202ENST00000421340 ERICH6BQ5W0A0 696 aa27.45■■□□□ 1.98
ABCF3-202ENST00000421340 C5P01031 1676 aa27.45■■□□□ 1.98
ABCF3-202ENST00000421340 ZNF831Q5JPB2 1677 aa27.45■■□□□ 1.98
ABCF3-202ENST00000421340 CICQ96RK0 1608 aaPredicted RBP27.45■■□□□ 1.98
ABCF3-202ENST00000421340 HMGB2P26583 209 aaKnown RBP27.44■■□□□ 1.98
ABCF3-202ENST00000421340 G2E3Q7L622 706 aa27.44■■□□□ 1.98
ABCF3-202ENST00000421340 DZIP1LQ8IYY4 767 aaKnown RBP27.44■■□□□ 1.98
ABCF3-202ENST00000421340 KAT6BQ8WYB5 2073 aa27.44■■□□□ 1.98
ABCF3-202ENST00000421340 LAMB4A4D0S4 1761 aa27.43■■□□□ 1.98
ABCF3-202ENST00000421340 BTAF1O14981 1849 aa27.43■■□□□ 1.98
ABCF3-202ENST00000421340 LRP10Q7Z4F1 713 aa27.42■■□□□ 1.98
ABCF3-202ENST00000421340 CACNA1FO60840 1977 aa27.41■■□□□ 1.98
ABCF3-202ENST00000421340 NBPF26B4DH59 902 aa27.41■■□□□ 1.98
ABCF3-202ENST00000421340 A1BGP04217 495 aa27.41■■□□□ 1.98
ABCF3-202ENST00000421340 PROSER3Q2NL68 480 aa27.41■■□□□ 1.98
ABCF3-202ENST00000421340 NBPF14Q5TI25 921 aa27.41■■□□□ 1.98
ABCF3-202ENST00000421340 NBPF10Q6P3W6 841 aaKnown RBP27.41■■□□□ 1.98
ABCF3-202ENST00000421340 NBPF15Q8N660 670 aa27.41■■□□□ 1.98
ABCF3-202ENST00000421340 PHAXQ9H814 394 aaKnown RBP27.41■■□□□ 1.98
ABCF3-202ENST00000421340 PLSCR1O15162 318 aa27.4■■□□□ 1.98
ABCF3-202ENST00000421340 ITPK1Q13572 414 aa27.4■■□□□ 1.98
ABCF3-202ENST00000421340 C20orf194Q5TEA3 1177 aa27.4■■□□□ 1.98
ABCF3-202ENST00000421340 FTSJ3Q8IY81 847 aaKnown RBP27.39■■□□□ 1.98
ABCF3-202ENST00000421340 ABCC4O15439 1325 aa27.39■■□□□ 1.97
ABCF3-202ENST00000421340 FKBP5Q13451 457 aaPredicted RBP27.38■■□□□ 1.97
ABCF3-202ENST00000421340 FKBP8Q14318 412 aa27.38■■□□□ 1.97
ABCF3-202ENST00000421340 SLC27A3Q5K4L6 730 aa27.38■■□□□ 1.97
ABCF3-202ENST00000421340 DDX58O95786 925 aaKnown RBP27.37■■□□□ 1.97
ABCF3-202ENST00000421340 ANXA1P04083 346 aa27.37■■□□□ 1.97
ABCF3-202ENST00000421340 MYL6BP14649 208 aa27.37■■□□□ 1.97
ABCF3-202ENST00000421340 TJP1Q07157 1748 aa27.37■■□□□ 1.97
ABCF3-202ENST00000421340 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
ABCF3-202ENST00000421340 PANK1Q8TE04 598 aa27.37■■□□□ 1.97
ABCF3-202ENST00000421340 CCNL1Q9UK58 526 aaPredicted RBP27.37■■□□□ 1.97
ABCF3-202ENST00000421340 CCDC87Q9NVE4 849 aa27.36■■□□□ 1.97
ABCF3-202ENST00000421340 RLBP1P12271 317 aa27.35■■□□□ 1.97
ABCF3-202ENST00000421340 IL6STP40189 918 aaPredicted RBP27.35■■□□□ 1.97
ABCF3-202ENST00000421340 IRX6P78412 446 aaPredicted RBP27.35■■□□□ 1.97
ABCF3-202ENST00000421340 INTS5Q6P9B9 1019 aaKnown RBP27.35■■□□□ 1.97
ABCF3-202ENST00000421340 KSR2Q6VAB6 950 aa27.35■■□□□ 1.97
ABCF3-202ENST00000421340 COPS6Q7L5N1 327 aa27.35■■□□□ 1.97
ABCF3-202ENST00000421340 CLUAP1Q96AJ1 413 aa27.35■■□□□ 1.97
ABCF3-202ENST00000421340 TNNQ9UQP3 1299 aa27.35■■□□□ 1.97
ABCF3-202ENST00000421340 CRKLP46109 303 aaKnown RBP27.34■■□□□ 1.97
ABCF3-202ENST00000421340 AAMPQ13685 434 aa27.34■■□□□ 1.97
ABCF3-202ENST00000421340 INTS3Q68E01 1043 aaKnown RBP27.34■■□□□ 1.97
ABCF3-202ENST00000421340 XAGE3Q8WTP9 111 aa27.34■■□□□ 1.97
ABCF3-202ENST00000421340 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
ABCF3-202ENST00000421340 LY75O60449 1722 aa27.33■■□□□ 1.97
ABCF3-202ENST00000421340 APBA3O96018 575 aa27.33■■□□□ 1.97
ABCF3-202ENST00000421340 MVPQ14764 893 aaKnown RBP27.33■■□□□ 1.97
ABCF3-202ENST00000421340 LINC00116Q8NCU8 138 aa27.32■■□□□ 1.96
ABCF3-202ENST00000421340 CRBNQ96SW2 442 aa27.32■■□□□ 1.96
ABCF3-202ENST00000421340 GTF3C3Q9Y5Q9 886 aa27.32■■□□□ 1.96
ABCF3-202ENST00000421340 PI4KAP2A4QPH2 592 aa27.31■■□□□ 1.96
ABCF3-202ENST00000421340 CCT4P50991 539 aaKnown RBP27.31■■□□□ 1.96
ABCF3-202ENST00000421340 ANKRD13DQ6ZTN6 518 aa27.31■■□□□ 1.96
ABCF3-202ENST00000421340 TMEM57Q8N5G2 664 aa27.31■■□□□ 1.96
ABCF3-202ENST00000421340 PI4KAP1Q8N8J0 262 aa27.31■■□□□ 1.96
ABCF3-202ENST00000421340 CHMP4BQ9H444 224 aaKnown RBP27.31■■□□□ 1.96
ABCF3-202ENST00000421340 ZBTB1Q9Y2K1 713 aa27.31■■□□□ 1.96
ABCF3-202ENST00000421340 COG6Q9Y2V7 657 aa27.31■■□□□ 1.96
ABCF3-202ENST00000421340 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
ABCF3-202ENST00000421340 EIF5P55010 431 aaKnown RBP27.3■■□□□ 1.96
ABCF3-202ENST00000421340 PLBD2Q8NHP8 589 aa27.3■■□□□ 1.96
ABCF3-202ENST00000421340 DNAAF4Q8WXU2 420 aa27.3■■□□□ 1.96
ABCF3-202ENST00000421340 DDX19BQ9UMR2 479 aa27.3■■□□□ 1.96
ABCF3-202ENST00000421340 AIMP1Q12904 312 aaKnown RBP27.29■■□□□ 1.96
ABCF3-202ENST00000421340 EXOC6Q8TAG9 804 aa27.29■■□□□ 1.96
ABCF3-202ENST00000421340 ADCY9O60503 1353 aa27.29■■□□□ 1.96
ABCF3-202ENST00000421340 PXDNLA1KZ92 1463 aa27.29■■□□□ 1.96
ABCF3-202ENST00000421340 RREB1Q92766 1687 aa27.28■■□□□ 1.96
ABCF3-202ENST00000421340 F6X3S4 739 aa27.28■■□□□ 1.96
ABCF3-202ENST00000421340 TXNRD1Q16881 649 aa27.27■■□□□ 1.96
ABCF3-202ENST00000421340 RIC3Q7Z5B4 369 aa27.27■■□□□ 1.96
ABCF3-202ENST00000421340 NPM2Q86SE8 214 aaKnown RBP27.27■■□□□ 1.96
ABCF3-202ENST00000421340 PROM2Q8N271 834 aa27.27■■□□□ 1.96
ABCF3-202ENST00000421340 LRRC4BQ9NT99 713 aa27.27■■□□□ 1.96
ABCF3-202ENST00000421340 MAP3K2Q9Y2U5 619 aa27.27■■□□□ 1.96
ABCF3-202ENST00000421340 IBTKQ9P2D0 1353 aaPredicted RBP27.26■■□□□ 1.95
ABCF3-202ENST00000421340 CCDC125Q86Z20 511 aa27.26■■□□□ 1.95
ABCF3-202ENST00000421340 ITPRIPQ8IWB1 547 aa27.26■■□□□ 1.95
ABCF3-202ENST00000421340 COL5A3P25940 1745 aaPredicted RBP27.26■■□□□ 1.95
ABCF3-202ENST00000421340 ATP10DQ9P241 1426 aa27.25■■□□□ 1.95
ABCF3-202ENST00000421340 A0A087WZG4 1122 aa27.25■■□□□ 1.95
ABCF3-202ENST00000421340 RPS6KA4O75676 772 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms