RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 ABL1P00519 1130 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 NOS2P35228 1153 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 CCDC27Q2M243 656 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 GNASQ5JWF2 1037 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 SLC27A3Q5K4L6 730 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
VPS8-202ENST00000421069 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
VPS8-202ENST00000421069 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 RHBDD1Q8TEB9 315 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 INSM2Q96T92 566 aaPredicted RBP8.16□□□□□ -1.1
VPS8-202ENST00000421069 CABP1Q9NZU7 370 aa8.16□□□□□ -1.1
VPS8-202ENST00000421069 SPATA31C2B4DYI2 1134 aa8.15□□□□□ -1.1
VPS8-202ENST00000421069 BMP2P12643 396 aa8.15□□□□□ -1.1
VPS8-202ENST00000421069 FKBP4Q02790 459 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS8-202ENST00000421069 C16orf46Q6P387 395 aa8.15□□□□□ -1.1
VPS8-202ENST00000421069 ZDHHC1Q8WTX9 485 aa8.15□□□□□ -1.1
VPS8-202ENST00000421069 POLMQ9NP87 494 aaPredicted RBP8.15□□□□□ -1.1
VPS8-202ENST00000421069 DNMT3AQ9Y6K1 912 aaPredicted RBP8.15□□□□□ -1.1
VPS8-202ENST00000421069 GFRA3O60609 400 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 SCARF1Q14162 830 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 NAA30Q147X3 362 aaPredicted RBP8.14□□□□□ -1.11
VPS8-202ENST00000421069 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 PKDCCQ504Y2 493 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 FOXD4L5Q5VV16 416 aaPredicted RBP8.14□□□□□ -1.11
VPS8-202ENST00000421069 CRIPAKQ8N1N5 446 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 L3MBTL2Q969R5 705 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 MYO19Q96H55 970 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 ZNF232Q9UNY5 417 aa8.14□□□□□ -1.11
VPS8-202ENST00000421069 NPR3P17342 541 aa8.13□□□□□ -1.11
VPS8-202ENST00000421069 CTSOP43234 321 aaPredicted RBP8.13□□□□□ -1.11
VPS8-202ENST00000421069 ZNF211Q13398 564 aaPredicted RBP8.13□□□□□ -1.11
VPS8-202ENST00000421069 WDR44Q5JSH3 913 aa8.13□□□□□ -1.11
VPS8-202ENST00000421069 GLYCTKQ8IVS8 523 aa8.13□□□□□ -1.11
VPS8-202ENST00000421069 H3BRB1 525 aa8.12□□□□□ -1.11
VPS8-202ENST00000421069 C1orf53Q5VUE5 145 aa8.12□□□□□ -1.11
VPS8-202ENST00000421069 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
VPS8-202ENST00000421069 SAP130Q9H0E3 1048 aa8.12□□□□□ -1.11
VPS8-202ENST00000421069 TUT1Q9H6E5 874 aaKnown RBP8.12□□□□□ -1.11
VPS8-202ENST00000421069 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
VPS8-202ENST00000421069 FAM13AO94988 1023 aa8.11□□□□□ -1.11
VPS8-202ENST00000421069 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
VPS8-202ENST00000421069 COX20Q5RI15 118 aa8.11□□□□□ -1.11
VPS8-202ENST00000421069 C6orf118Q5T5N4 469 aa8.11□□□□□ -1.11
VPS8-202ENST00000421069 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
VPS8-202ENST00000421069 ANO2Q9NQ90 1003 aa8.11□□□□□ -1.11
VPS8-202ENST00000421069 TTLL8A6PVC2 850 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 AXIN1O15169 862 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 ECM1Q16610 540 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 RTN1Q16799 776 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 SH3PXD2AQ5TCZ1 1133 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 LYSMD3Q7Z3D4 306 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 ALDH16A1Q8IZ83 802 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 ZDHHC3Q9NYG2 299 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 STIM2Q9P246 746 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
VPS8-202ENST00000421069 HCN4Q9Y3Q4 1203 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
VPS8-202ENST00000421069 SOS2Q07890 1332 aaPredicted RBP8.09□□□□□ -1.11
VPS8-202ENST00000421069 TNFRSF10BO14763 440 aa8.09□□□□□ -1.11
VPS8-202ENST00000421069 PLA2G4AP47712 749 aa8.09□□□□□ -1.11
VPS8-202ENST00000421069 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
VPS8-202ENST00000421069 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
VPS8-202ENST00000421069 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
VPS8-202ENST00000421069 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.11
VPS8-202ENST00000421069 GPC6Q9Y625 555 aaPredicted RBP8.09□□□□□ -1.11
VPS8-202ENST00000421069 ERCC3P19447 782 aa8.08□□□□□ -1.12
VPS8-202ENST00000421069 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
VPS8-202ENST00000421069 ARHGAP4P98171 946 aa8.08□□□□□ -1.12
VPS8-202ENST00000421069 POU4F2Q12837 409 aa8.08□□□□□ -1.12
VPS8-202ENST00000421069 MTMR3Q13615 1198 aa8.08□□□□□ -1.12
VPS8-202ENST00000421069 C11orf91Q3C1V1 193 aa8.08□□□□□ -1.12
VPS8-202ENST00000421069 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
VPS8-202ENST00000421069 BMP1P13497 986 aa8.07□□□□□ -1.12
VPS8-202ENST00000421069 BRD2P25440 801 aaKnown RBP8.07□□□□□ -1.12
VPS8-202ENST00000421069 TXLNAP40222 546 aa8.07□□□□□ -1.12
VPS8-202ENST00000421069 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
VPS8-202ENST00000421069 PRICKLE2Q7Z3G6 844 aa8.07□□□□□ -1.12
VPS8-202ENST00000421069 ABTB2Q8N961 1025 aa8.07□□□□□ -1.12
VPS8-202ENST00000421069 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
VPS8-202ENST00000421069 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
VPS8-202ENST00000421069 MPSTP25325 297 aa8.06□□□□□ -1.12
VPS8-202ENST00000421069 HIF1AQ16665 826 aa8.06□□□□□ -1.12
VPS8-202ENST00000421069 C7orf43Q8WVR3 580 aa8.06□□□□□ -1.12
VPS8-202ENST00000421069 A0A1B0GTH6 734 aa8.05□□□□□ -1.12
VPS8-202ENST00000421069 PHKA2P46019 1235 aa8.05□□□□□ -1.12
VPS8-202ENST00000421069 NOM1Q5C9Z4 860 aaKnown RBP8.05□□□□□ -1.12
VPS8-202ENST00000421069 DNAJC14Q6Y2X3 702 aaPredicted RBP8.05□□□□□ -1.12
VPS8-202ENST00000421069 AIDAQ96BJ3 306 aa8.05□□□□□ -1.12
VPS8-202ENST00000421069 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
VPS8-202ENST00000421069 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
VPS8-202ENST00000421069 DCTN4Q9UJW0 460 aa8.05□□□□□ -1.12
VPS8-202ENST00000421069 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
VPS8-202ENST00000421069 EIF1AXP47813 144 aaKnown RBP8.04□□□□□ -1.12
VPS8-202ENST00000421069 DGKZQ13574 1117 aa8.04□□□□□ -1.12
VPS8-202ENST00000421069 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
VPS8-202ENST00000421069 ATP13A2Q9NQ11 1180 aa8.04□□□□□ -1.12
VPS8-202ENST00000421069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.03□□□□□ -1.12
VPS8-202ENST00000421069 RHPN1Q8TCX5 695 aa8.03□□□□□ -1.12
VPS8-202ENST00000421069 KLK14Q9P0G3 267 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms