RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
TRIM39-206ENST00000420746 LTBP3Q9NS15 1303 aa12.79□□□□□ -0.36
TRIM39-206ENST00000420746 PHKG2P15735 406 aa12.78□□□□□ -0.36
TRIM39-206ENST00000420746 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
TRIM39-206ENST00000420746 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
TRIM39-206ENST00000420746 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
TRIM39-206ENST00000420746 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
TRIM39-206ENST00000420746 MCOLN1Q9GZU1 580 aa12.77□□□□□ -0.37
TRIM39-206ENST00000420746 DICER1Q9UPY3 1922 aaKnown RBP12.77□□□□□ -0.37
TRIM39-206ENST00000420746 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
TRIM39-206ENST00000420746 SCN4AP35499 1836 aa12.76□□□□□ -0.37
TRIM39-206ENST00000420746 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
TRIM39-206ENST00000420746 CA12O43570 354 aa12.76□□□□□ -0.37
TRIM39-206ENST00000420746 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
TRIM39-206ENST00000420746 ECE1P42892 770 aa12.75□□□□□ -0.37
TRIM39-206ENST00000420746 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
TRIM39-206ENST00000420746 CCDC88AQ3V6T2 1871 aa12.75□□□□□ -0.37
TRIM39-206ENST00000420746 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
TRIM39-206ENST00000420746 ADAMTSL1Q8N6G6 1762 aa12.75□□□□□ -0.37
TRIM39-206ENST00000420746 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
TRIM39-206ENST00000420746 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
TRIM39-206ENST00000420746 H0YIN7 160 aa12.74□□□□□ -0.37
TRIM39-206ENST00000420746 TAOK3Q9H2K8 898 aa12.74□□□□□ -0.37
TRIM39-206ENST00000420746 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
TRIM39-206ENST00000420746 ZPR1O75312 459 aa12.73□□□□□ -0.37
TRIM39-206ENST00000420746 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
TRIM39-206ENST00000420746 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
TRIM39-206ENST00000420746 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
TRIM39-206ENST00000420746 FYB1O15117 783 aa12.72□□□□□ -0.37
TRIM39-206ENST00000420746 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
TRIM39-206ENST00000420746 NFIXQ14938 502 aa12.72□□□□□ -0.37
TRIM39-206ENST00000420746 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-206ENST00000420746 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
TRIM39-206ENST00000420746 LTBP1Q14766 1721 aa12.71□□□□□ -0.37
TRIM39-206ENST00000420746 MAP2K2P36507 400 aa12.71□□□□□ -0.37
TRIM39-206ENST00000420746 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
TRIM39-206ENST00000420746 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
TRIM39-206ENST00000420746 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-206ENST00000420746 AFDNP55196 1824 aaKnown RBP12.7□□□□□ -0.38
TRIM39-206ENST00000420746 SERPINB2P05120 415 aa12.7□□□□□ -0.38
TRIM39-206ENST00000420746 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
TRIM39-206ENST00000420746 HACL1Q9UJ83 578 aa12.7□□□□□ -0.38
TRIM39-206ENST00000420746 C21orf2O43822 256 aa12.69□□□□□ -0.38
TRIM39-206ENST00000420746 EPHX2P34913 555 aa12.69□□□□□ -0.38
TRIM39-206ENST00000420746 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
TRIM39-206ENST00000420746 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
TRIM39-206ENST00000420746 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
TRIM39-206ENST00000420746 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
TRIM39-206ENST00000420746 DDX21Q9NR30 783 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRIM39-206ENST00000420746 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
TRIM39-206ENST00000420746 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
TRIM39-206ENST00000420746 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
TRIM39-206ENST00000420746 DGKZQ13574 1117 aa12.68□□□□□ -0.38
TRIM39-206ENST00000420746 CARMIL3Q8ND23 1372 aa12.68□□□□□ -0.38
TRIM39-206ENST00000420746 PDE6BP35913 854 aa12.67□□□□□ -0.38
TRIM39-206ENST00000420746 MAP1SQ66K74 1059 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-206ENST00000420746 EYA1Q99502 592 aa12.67□□□□□ -0.38
TRIM39-206ENST00000420746 BRIP1Q9BX63 1249 aa12.67□□□□□ -0.38
TRIM39-206ENST00000420746 TJP1Q07157 1748 aa12.67□□□□□ -0.38
TRIM39-206ENST00000420746 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
TRIM39-206ENST00000420746 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
TRIM39-206ENST00000420746 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
TRIM39-206ENST00000420746 BRPF1P55201 1214 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-206ENST00000420746 CABP4P57796 275 aa12.66□□□□□ -0.38
TRIM39-206ENST00000420746 CYP4F22Q6NT55 531 aa12.66□□□□□ -0.38
TRIM39-206ENST00000420746 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM39-206ENST00000420746 TSKSQ9UJT2 592 aa12.66□□□□□ -0.38
TRIM39-206ENST00000420746 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-206ENST00000420746 CNKSR1Q969H4 720 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 HHIPL1Q96JK4 782 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 COL15A1P39059 1388 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
TRIM39-206ENST00000420746 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
TRIM39-206ENST00000420746 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
TRIM39-206ENST00000420746 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
TRIM39-206ENST00000420746 SOX10P56693 466 aa12.62□□□□□ -0.39
TRIM39-206ENST00000420746 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
TRIM39-206ENST00000420746 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
TRIM39-206ENST00000420746 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
TRIM39-206ENST00000420746 AOC2O75106 756 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 GRM1Q13255 1194 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 CST9Q5W186 159 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 GPC2Q8N158 579 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-206ENST00000420746 TESK2Q96S53 571 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-206ENST00000420746 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
TRIM39-206ENST00000420746 FZD9O00144 591 aa12.6□□□□□ -0.39
TRIM39-206ENST00000420746 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-206ENST00000420746 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM39-206ENST00000420746 AMOTQ4VCS5 1084 aa12.6□□□□□ -0.39
TRIM39-206ENST00000420746 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
TRIM39-206ENST00000420746 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
TRIM39-206ENST00000420746 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
TRIM39-206ENST00000420746 SRGNP10124 158 aa12.59□□□□□ -0.39
TRIM39-206ENST00000420746 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms