RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TJP1Q07157 1748 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 A1BGP04217 495 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 KCNQ4P56696 695 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 PDIA6Q15084 440 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 SMC4Q9NTJ3 1288 aa16.02■□□□□ 0.16
TMEM53-206ENST00000420706 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
TMEM53-206ENST00000420706 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-206ENST00000420706 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
TMEM53-206ENST00000420706 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
TMEM53-206ENST00000420706 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM53-206ENST00000420706 LRRC4BQ9NT99 713 aa16.01■□□□□ 0.15
TMEM53-206ENST00000420706 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
TMEM53-206ENST00000420706 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-206ENST00000420706 ERBB4Q15303 1308 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 NBPF26B4DH59 902 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 ANXA1P04083 346 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 PROSER3Q2NL68 480 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 NBPF14Q5TI25 921 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 NBPF10Q6P3W6 841 aaKnown RBP16■□□□□ 0.15
TMEM53-206ENST00000420706 CCDC125Q86Z20 511 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 NBPF15Q8N660 670 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
TMEM53-206ENST00000420706 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
TMEM53-206ENST00000420706 CACNA1FO60840 1977 aa15.99■□□□□ 0.15
TMEM53-206ENST00000420706 PIP4K2AP48426 406 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-206ENST00000420706 INTS5Q6P9B9 1019 aaKnown RBP15.99■□□□□ 0.15
TMEM53-206ENST00000420706 G2E3Q7L622 706 aa15.99■□□□□ 0.15
TMEM53-206ENST00000420706 CAMKK2Q96RR4 588 aa15.99■□□□□ 0.15
TMEM53-206ENST00000420706 MYL6BP14649 208 aa15.98■□□□□ 0.15
TMEM53-206ENST00000420706 CRKLP46109 303 aaKnown RBP15.98■□□□□ 0.15
TMEM53-206ENST00000420706 EN1Q05925 392 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-206ENST00000420706 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
TMEM53-206ENST00000420706 LRP10Q7Z4F1 713 aa15.98■□□□□ 0.15
TMEM53-206ENST00000420706 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
TMEM53-206ENST00000420706 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
TMEM53-206ENST00000420706 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
TMEM53-206ENST00000420706 COL5A3P25940 1745 aaPredicted RBP15.97■□□□□ 0.15
TMEM53-206ENST00000420706 TAF1LQ8IZX4 1826 aa15.97■□□□□ 0.15
TMEM53-206ENST00000420706 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
TMEM53-206ENST00000420706 BAG6P46379 1132 aa15.97■□□□□ 0.15
TMEM53-206ENST00000420706 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
TMEM53-206ENST00000420706 CCDC87Q9NVE4 849 aa15.97■□□□□ 0.15
TMEM53-206ENST00000420706 ZBTB1Q9Y2K1 713 aa15.97■□□□□ 0.15
TMEM53-206ENST00000420706 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.15
TMEM53-206ENST00000420706 CNTNAP4Q9C0A0 1308 aa15.96■□□□□ 0.15
TMEM53-206ENST00000420706 RGPD3A6NKT7 1758 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-206ENST00000420706 RGPD4Q7Z3J3 1758 aa15.96■□□□□ 0.15
TMEM53-206ENST00000420706 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
TMEM53-206ENST00000420706 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.15
TMEM53-206ENST00000420706 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
TMEM53-206ENST00000420706 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
TMEM53-206ENST00000420706 PLIN1O60240 522 aa15.95■□□□□ 0.14
TMEM53-206ENST00000420706 IL6STP40189 918 aaPredicted RBP15.95■□□□□ 0.14
TMEM53-206ENST00000420706 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
TMEM53-206ENST00000420706 FLIIQ13045 1269 aa15.95■□□□□ 0.14
TMEM53-206ENST00000420706 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
TMEM53-206ENST00000420706 ARHGAP45Q92619 1136 aa15.95■□□□□ 0.14
TMEM53-206ENST00000420706 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
TMEM53-206ENST00000420706 IPO8O15397 1037 aaKnown RBP15.94■□□□□ 0.14
TMEM53-206ENST00000420706 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
TMEM53-206ENST00000420706 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
TMEM53-206ENST00000420706 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
TMEM53-206ENST00000420706 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
TMEM53-206ENST00000420706 RREB1Q92766 1687 aa15.94■□□□□ 0.14
TMEM53-206ENST00000420706 RPS6KA4O75676 772 aa15.93■□□□□ 0.14
TMEM53-206ENST00000420706 AIMP1Q12904 312 aaKnown RBP15.93■□□□□ 0.14
TMEM53-206ENST00000420706 PTPRCP08575 1304 aa15.93■□□□□ 0.14
TMEM53-206ENST00000420706 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
TMEM53-206ENST00000420706 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
TMEM53-206ENST00000420706 API5Q9BZZ5 524 aaKnown RBP15.92■□□□□ 0.14
TMEM53-206ENST00000420706 TNNQ9UQP3 1299 aa15.92■□□□□ 0.14
TMEM53-206ENST00000420706 TRIM27P14373 513 aa15.91■□□□□ 0.14
TMEM53-206ENST00000420706 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
TMEM53-206ENST00000420706 TTLL7Q6ZT98 887 aa15.91■□□□□ 0.14
TMEM53-206ENST00000420706 AK7Q96M32 723 aa15.91■□□□□ 0.14
TMEM53-206ENST00000420706 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
TMEM53-206ENST00000420706 GNPATO15228 680 aa15.9■□□□□ 0.14
TMEM53-206ENST00000420706 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
TMEM53-206ENST00000420706 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
TMEM53-206ENST00000420706 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
TMEM53-206ENST00000420706 RTCBQ9Y3I0 505 aaKnown RBP15.9■□□□□ 0.14
TMEM53-206ENST00000420706 A0A087WZG4 1122 aa15.89■□□□□ 0.13
TMEM53-206ENST00000420706 PI4KAP2A4QPH2 592 aa15.89■□□□□ 0.13
TMEM53-206ENST00000420706 F6X3S4 739 aa15.89■□□□□ 0.13
TMEM53-206ENST00000420706 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
TMEM53-206ENST00000420706 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
TMEM53-206ENST00000420706 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
TMEM53-206ENST00000420706 PI4KAP1Q8N8J0 262 aa15.89■□□□□ 0.13
TMEM53-206ENST00000420706 MS4A1P11836 297 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 PDE3AQ14432 1141 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
TMEM53-206ENST00000420706 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
TMEM53-206ENST00000420706 PLBD2Q8NHP8 589 aa15.88■□□□□ 0.13
TMEM53-206ENST00000420706 CLUAP1Q96AJ1 413 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms