RNA–Protein interactions for RNA: ENST00000420591.1

SNED1-206, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 3

Gene SNED1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-206ENST00000420591 COL15A1P39059 1388 aa26.48■■□□□ 1.83
SNED1-206ENST00000420591 C1QTNF8P60827 252 aa26.48■■□□□ 1.83
SNED1-206ENST00000420591 ZNF496Q96IT1 587 aaPredicted RBP26.48■■□□□ 1.83
SNED1-206ENST00000420591 NARFQ9UHQ1 456 aa26.48■■□□□ 1.83
SNED1-206ENST00000420591 NEFMP07197 916 aa26.47■■□□□ 1.83
SNED1-206ENST00000420591 DDR1Q08345 913 aa26.47■■□□□ 1.83
SNED1-206ENST00000420591 NPM2Q86SE8 214 aaKnown RBP26.47■■□□□ 1.83
SNED1-206ENST00000420591 FMNL2Q96PY5 1086 aa26.47■■□□□ 1.83
SNED1-206ENST00000420591 HEG1Q9ULI3 1381 aa26.46■■□□□ 1.83
SNED1-206ENST00000420591 BTBD11A6QL63 1104 aa26.46■■□□□ 1.83
SNED1-206ENST00000420591 ATP10DQ9P241 1426 aa26.46■■□□□ 1.83
SNED1-206ENST00000420591 VIRMAQ69YN4 1812 aaKnown RBP26.46■■□□□ 1.83
SNED1-206ENST00000420591 A0A087WZG4 1122 aa26.45■■□□□ 1.82
SNED1-206ENST00000420591 TM4SF1P30408 202 aa26.45■■□□□ 1.82
SNED1-206ENST00000420591 CEMIPQ8WUJ3 1361 aa26.45■■□□□ 1.82
SNED1-206ENST00000420591 POLRMTO00411 1230 aaKnown RBP26.44■■□□□ 1.82
SNED1-206ENST00000420591 GPBP1L1Q9HC44 474 aaPredicted RBP26.44■■□□□ 1.82
SNED1-206ENST00000420591 PIM2Q9P1W9 311 aa26.44■■□□□ 1.82
SNED1-206ENST00000420591 ZNF330Q9Y3S2 320 aaPredicted RBP26.43■■□□□ 1.82
SNED1-206ENST00000420591 KIF13BQ9NQT8 1826 aa26.42■■□□□ 1.82
SNED1-206ENST00000420591 ARHGAP27Q6ZUM4 889 aa26.42■■□□□ 1.82
SNED1-206ENST00000420591 NFIXQ14938 502 aa26.41■■□□□ 1.82
SNED1-206ENST00000420591 ZNF526Q8TF50 670 aaPredicted RBP26.41■■□□□ 1.82
SNED1-206ENST00000420591 HTATSF1O43719 755 aaKnown RBP26.4■■□□□ 1.82
SNED1-206ENST00000420591 EIF5P55010 431 aaKnown RBP26.4■■□□□ 1.82
SNED1-206ENST00000420591 MCM10Q7L590 875 aa26.4■■□□□ 1.82
SNED1-206ENST00000420591 N4BP2Q86UW6 1770 aaPredicted RBP26.39■■□□□ 1.82
SNED1-206ENST00000420591 UBR2Q8IWV8 1755 aa26.39■■□□□ 1.82
SNED1-206ENST00000420591 SENP3-EIF4A1A0A087X0R7 540 aa26.39■■□□□ 1.82
SNED1-206ENST00000420591 DALRD3Q5D0E6 543 aaKnown RBP26.39■■□□□ 1.82
SNED1-206ENST00000420591 ADCY9O60503 1353 aa26.38■■□□□ 1.81
SNED1-206ENST00000420591 KCNA3P22001 575 aa26.38■■□□□ 1.81
SNED1-206ENST00000420591 KCNQ3O43525 872 aa26.37■■□□□ 1.81
SNED1-206ENST00000420591 SERPINB2P05120 415 aa26.37■■□□□ 1.81
SNED1-206ENST00000420591 IL6STP40189 918 aaPredicted RBP26.37■■□□□ 1.81
SNED1-206ENST00000420591 BICDL1Q6ZP65 573 aa26.37■■□□□ 1.81
SNED1-206ENST00000420591 BCL2L12Q9HB09 334 aa26.37■■□□□ 1.81
SNED1-206ENST00000420591 CHRNA5P30532 468 aa26.36■■□□□ 1.81
SNED1-206ENST00000420591 PNNQ9H307 717 aaKnown RBP26.36■■□□□ 1.81
SNED1-206ENST00000420591 A1BGP04217 495 aa26.35■■□□□ 1.81
SNED1-206ENST00000420591 DCTN1Q14203 1278 aa26.35■■□□□ 1.81
SNED1-206ENST00000420591 KIAA1551Q9HCM1 1747 aa26.35■■□□□ 1.81
SNED1-206ENST00000420591 TBC1D2BQ9UPU7 963 aa26.35■■□□□ 1.81
SNED1-206ENST00000420591 SNRPA1P09661 255 aaKnown RBP26.33■■□□□ 1.81
SNED1-206ENST00000420591 TAF7Q15545 349 aaPredicted RBP26.32■■□□□ 1.8
SNED1-206ENST00000420591 SIPA1L3O60292 1781 aaPredicted RBP26.32■■□□□ 1.8
SNED1-206ENST00000420591 USP16Q9Y5T5 823 aa26.31■■□□□ 1.8
SNED1-206ENST00000420591 NPHP1O15259 732 aa26.3■■□□□ 1.8
SNED1-206ENST00000420591 RALBP1Q15311 655 aa26.3■■□□□ 1.8
SNED1-206ENST00000420591 TBC1D9BQ66K14 1250 aa26.3■■□□□ 1.8
SNED1-206ENST00000420591 MAPK8IP3Q9UPT6 1336 aa26.3■■□□□ 1.8
SNED1-206ENST00000420591 DZIP3Q86Y13 1208 aaKnown RBP26.29■■□□□ 1.8
SNED1-206ENST00000420591 H0YIN7 160 aa26.28■■□□□ 1.8
SNED1-206ENST00000420591 PNISRQ8TF01 805 aaKnown RBP26.28■■□□□ 1.8
SNED1-206ENST00000420591 C9orf131Q5VYM1 1079 aa26.27■■□□□ 1.8
SNED1-206ENST00000420591 C2CD5Q86YS7 1000 aa26.27■■□□□ 1.8
SNED1-206ENST00000420591 SETDB2Q96T68 719 aa26.27■■□□□ 1.8
SNED1-206ENST00000420591 CARMIL3Q8ND23 1372 aa26.26■■□□□ 1.79
SNED1-206ENST00000420591 DDX10Q13206 875 aaKnown RBP26.26■■□□□ 1.79
SNED1-206ENST00000420591 NFE2L2Q16236 605 aa26.26■■□□□ 1.79
SNED1-206ENST00000420591 PRAMEF22A3QJZ6 481 aa26.25■■□□□ 1.79
SNED1-206ENST00000420591 CAMTA2O94983 1202 aa26.25■■□□□ 1.79
SNED1-206ENST00000420591 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
SNED1-206ENST00000420591 TTLL6Q8N841 843 aa26.25■■□□□ 1.79
SNED1-206ENST00000420591 PLEKHF1Q96S99 279 aa26.25■■□□□ 1.79
SNED1-206ENST00000420591 PDE6BP35913 854 aa26.24■■□□□ 1.79
SNED1-206ENST00000420591 MIS18AQ9NYP9 233 aa26.24■■□□□ 1.79
SNED1-206ENST00000420591 PDZRN3Q9UPQ7 1066 aa26.24■■□□□ 1.79
SNED1-206ENST00000420591 ZNF652Q9Y2D9 606 aa26.24■■□□□ 1.79
SNED1-206ENST00000420591 BRCA1P38398 1863 aaKnown RBP26.23■■□□□ 1.79
SNED1-206ENST00000420591 RNF181Q9P0P0 153 aa26.23■■□□□ 1.79
SNED1-206ENST00000420591 BRIP1Q9BX63 1249 aa26.22■■□□□ 1.79
SNED1-206ENST00000420591 AFDNP55196 1824 aaKnown RBP26.21■■□□□ 1.79
SNED1-206ENST00000420591 ST5P78524 1137 aa26.21■■□□□ 1.79
SNED1-206ENST00000420591 PRR5LQ6MZQ0 368 aa26.21■■□□□ 1.79
SNED1-206ENST00000420591 CNBD1Q8NA66 436 aa26.21■■□□□ 1.79
SNED1-206ENST00000420591 NRXN2Q9P2S2 1712 aa26.21■■□□□ 1.79
SNED1-206ENST00000420591 ARFGEF1Q9Y6D6 1849 aa26.21■■□□□ 1.79
SNED1-206ENST00000420591 CLEC4GQ6UXB4 293 aa26.2■■□□□ 1.78
SNED1-206ENST00000420591 ZNF622Q969S3 477 aaKnown RBP eCLIP26.2■■□□□ 1.78
SNED1-206ENST00000420591 CCDC24Q8N4L8 307 aa26.19■■□□□ 1.78
SNED1-206ENST00000420591 SCN7AQ01118 1682 aa26.19■■□□□ 1.78
SNED1-206ENST00000420591 KIF3CO14782 793 aa26.18■■□□□ 1.78
SNED1-206ENST00000420591 THUMPD2Q9BTF0 503 aaKnown RBP26.18■■□□□ 1.78
SNED1-206ENST00000420591 NBPF5PQ86XG9 351 aaPredicted RBP26.17■■□□□ 1.78
SNED1-206ENST00000420591 MYBBP1AQ9BQG0 1328 aaKnown RBP26.16■■□□□ 1.78
SNED1-206ENST00000420591 NBPF26B4DH59 902 aa26.16■■□□□ 1.78
SNED1-206ENST00000420591 NBPF10Q6P3W6 841 aaKnown RBP26.16■■□□□ 1.78
SNED1-206ENST00000420591 NBPF15Q8N660 670 aa26.16■■□□□ 1.78
SNED1-206ENST00000420591 KDM2BQ8NHM5 1336 aa26.15■■□□□ 1.78
SNED1-206ENST00000420591 RIPK4P57078 832 aa26.15■■□□□ 1.78
SNED1-206ENST00000420591 RGL2O15211 777 aa26.14■■□□□ 1.78
SNED1-206ENST00000420591 EIF4A1P60842 406 aaKnown RBP26.14■■□□□ 1.78
SNED1-206ENST00000420591 RASSF7Q02833 373 aa26.14■■□□□ 1.78
SNED1-206ENST00000420591 LMOD3Q0VAK6 560 aa26.14■■□□□ 1.78
SNED1-206ENST00000420591 C16orf71Q8IYS4 520 aaPredicted RBP26.14■■□□□ 1.78
SNED1-206ENST00000420591 LMNB1P20700 586 aa26.13■■□□□ 1.77
SNED1-206ENST00000420591 NGEFQ8N5V2 710 aa26.13■■□□□ 1.77
SNED1-206ENST00000420591 NMRK2Q9NPI5 230 aa26.13■■□□□ 1.77
SNED1-206ENST00000420591 NIP7Q9Y221 180 aaKnown RBP eCLIP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms