RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF496Q96IT1 587 aaPredicted RBP14.8□□□□□ -0.04
SSBP3-206ENST00000420121 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
SSBP3-206ENST00000420121 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
SSBP3-206ENST00000420121 ARFGEF1Q9Y6D6 1849 aa14.8□□□□□ -0.04
SSBP3-206ENST00000420121 FCHSD2O94868 740 aa14.79□□□□□ -0.04
SSBP3-206ENST00000420121 U2AF1L5P0DN76 240 aaPredicted RBP14.79□□□□□ -0.04
SSBP3-206ENST00000420121 COL15A1P39059 1388 aa14.79□□□□□ -0.04
SSBP3-206ENST00000420121 U2AF1Q01081 240 aaKnown RBP eCLIP14.79□□□□□ -0.04
SSBP3-206ENST00000420121 SCN7AQ01118 1682 aa14.79□□□□□ -0.04
SSBP3-206ENST00000420121 ZNF790Q6PG37 636 aa14.79□□□□□ -0.04
SSBP3-206ENST00000420121 HEG1Q9ULI3 1381 aa14.79□□□□□ -0.04
SSBP3-206ENST00000420121 TEFQ10587 303 aa14.78□□□□□ -0.04
SSBP3-206ENST00000420121 WWC3Q9ULE0 1092 aa14.78□□□□□ -0.04
SSBP3-206ENST00000420121 KCNQ3O43525 872 aa14.77□□□□□ -0.05
SSBP3-206ENST00000420121 TM4SF1P30408 202 aa14.77□□□□□ -0.05
SSBP3-206ENST00000420121 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
SSBP3-206ENST00000420121 BCORQ6W2J9 1755 aa14.77□□□□□ -0.05
SSBP3-206ENST00000420121 ADCY9O60503 1353 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 KDM3BQ7LBC6 1761 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 DLEC1Q9Y238 1755 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 TGFB2P61812 414 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
SSBP3-206ENST00000420121 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 TTC5Q8N0Z6 440 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 NARFQ9UHQ1 456 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 PARP3Q9Y6F1 533 aa14.76□□□□□ -0.05
SSBP3-206ENST00000420121 A0A0G2JLW4 131 aa14.75□□□□□ -0.05
SSBP3-206ENST00000420121 POLRMTO00411 1230 aaKnown RBP14.75□□□□□ -0.05
SSBP3-206ENST00000420121 KCNA3P22001 575 aa14.75□□□□□ -0.05
SSBP3-206ENST00000420121 EIF5P55010 431 aaKnown RBP14.75□□□□□ -0.05
SSBP3-206ENST00000420121 MCM10Q7L590 875 aa14.75□□□□□ -0.05
SSBP3-206ENST00000420121 ANKRD31Q8N7Z5 1873 aa14.74□□□□□ -0.05
SSBP3-206ENST00000420121 DPEP1P16444 411 aa14.74□□□□□ -0.05
SSBP3-206ENST00000420121 DCTN1Q14203 1278 aa14.74□□□□□ -0.05
SSBP3-206ENST00000420121 PLEKHF1Q96S99 279 aa14.74□□□□□ -0.05
SSBP3-206ENST00000420121 LAMB4A4D0S4 1761 aa14.74□□□□□ -0.05
SSBP3-206ENST00000420121 BTBD11A6QL63 1104 aa14.73□□□□□ -0.05
SSBP3-206ENST00000420121 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
SSBP3-206ENST00000420121 NFIXQ14938 502 aa14.73□□□□□ -0.05
SSBP3-206ENST00000420121 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
SSBP3-206ENST00000420121 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
SSBP3-206ENST00000420121 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
SSBP3-206ENST00000420121 ZPR1O75312 459 aa14.72□□□□□ -0.05
SSBP3-206ENST00000420121 STARD3NLO95772 234 aa14.72□□□□□ -0.05
SSBP3-206ENST00000420121 FMNL2Q96PY5 1086 aa14.72□□□□□ -0.05
SSBP3-206ENST00000420121 ATP10DQ9P241 1426 aa14.72□□□□□ -0.05
SSBP3-206ENST00000420121 TEX13AQ9BXU3 409 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-206ENST00000420121 SBF1O95248 1867 aa14.71□□□□□ -0.05
SSBP3-206ENST00000420121 A1BGP04217 495 aa14.7□□□□□ -0.06
SSBP3-206ENST00000420121 IL6STP40189 918 aaPredicted RBP14.7□□□□□ -0.06
SSBP3-206ENST00000420121 DDX10Q13206 875 aaKnown RBP14.7□□□□□ -0.06
SSBP3-206ENST00000420121 RTF1Q92541 710 aaKnown RBP14.7□□□□□ -0.06
SSBP3-206ENST00000420121 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
SSBP3-206ENST00000420121 CARMIL3Q8ND23 1372 aa14.7□□□□□ -0.06
SSBP3-206ENST00000420121 COL11A2P13942 1736 aaPredicted RBP14.69□□□□□ -0.06
SSBP3-206ENST00000420121 CHRNA5P30532 468 aa14.69□□□□□ -0.06
SSBP3-206ENST00000420121 RALBP1Q15311 655 aa14.69□□□□□ -0.06
SSBP3-206ENST00000420121 BCS1LQ9Y276 419 aa14.69□□□□□ -0.06
SSBP3-206ENST00000420121 A0A087WZG4 1122 aa14.67□□□□□ -0.06
SSBP3-206ENST00000420121 CAMTA2O94983 1202 aa14.67□□□□□ -0.06
SSBP3-206ENST00000420121 SERPINB2P05120 415 aa14.67□□□□□ -0.06
SSBP3-206ENST00000420121 PIP4K2AP48426 406 aaPredicted RBP14.67□□□□□ -0.06
SSBP3-206ENST00000420121 TAF7Q15545 349 aaPredicted RBP14.67□□□□□ -0.06
SSBP3-206ENST00000420121 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
SSBP3-206ENST00000420121 TBC1D9BQ66K14 1250 aa14.67□□□□□ -0.06
SSBP3-206ENST00000420121 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
SSBP3-206ENST00000420121 NBPF26B4DH59 902 aa14.66□□□□□ -0.06
SSBP3-206ENST00000420121 C1QTNF8P60827 252 aa14.66□□□□□ -0.06
SSBP3-206ENST00000420121 NBPF10Q6P3W6 841 aaKnown RBP14.66□□□□□ -0.06
SSBP3-206ENST00000420121 NBPF15Q8N660 670 aa14.66□□□□□ -0.06
SSBP3-206ENST00000420121 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
SSBP3-206ENST00000420121 MIS18AQ9NYP9 233 aa14.66□□□□□ -0.06
SSBP3-206ENST00000420121 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
SSBP3-206ENST00000420121 SNRPA1P09661 255 aaKnown RBP14.65□□□□□ -0.06
SSBP3-206ENST00000420121 CACNA1SQ13698 1873 aa14.65□□□□□ -0.06
SSBP3-206ENST00000420121 CCDC88AQ3V6T2 1871 aa14.65□□□□□ -0.06
SSBP3-206ENST00000420121 MYBBP1AQ9BQG0 1328 aaKnown RBP14.65□□□□□ -0.06
SSBP3-206ENST00000420121 GIGYF1O75420 1035 aaPredicted RBP14.64□□□□□ -0.07
SSBP3-206ENST00000420121 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
SSBP3-206ENST00000420121 ZNF330Q9Y3S2 320 aaPredicted RBP14.64□□□□□ -0.07
SSBP3-206ENST00000420121 ARFGEF2Q9Y6D5 1785 aa14.64□□□□□ -0.07
SSBP3-206ENST00000420121 NUP98P52948 1817 aa14.64□□□□□ -0.07
SSBP3-206ENST00000420121 DALRD3Q5D0E6 543 aaKnown RBP14.63□□□□□ -0.07
SSBP3-206ENST00000420121 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
SSBP3-206ENST00000420121 DZIP3Q86Y13 1208 aaKnown RBP14.63□□□□□ -0.07
SSBP3-206ENST00000420121 PRR5LQ6MZQ0 368 aa14.62□□□□□ -0.07
SSBP3-206ENST00000420121 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
SSBP3-206ENST00000420121 NEFMP07197 916 aa14.61□□□□□ -0.07
SSBP3-206ENST00000420121 EIF4A1P60842 406 aaKnown RBP14.61□□□□□ -0.07
SSBP3-206ENST00000420121 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
SSBP3-206ENST00000420121 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
SSBP3-206ENST00000420121 SLX4Q8IY92 1834 aa14.6□□□□□ -0.07
SSBP3-206ENST00000420121 CCDC24Q8N4L8 307 aa14.6□□□□□ -0.07
SSBP3-206ENST00000420121 PNISRQ8TF01 805 aaKnown RBP14.6□□□□□ -0.07
SSBP3-206ENST00000420121 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
SSBP3-206ENST00000420121 GPBP1L1Q9HC44 474 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-206ENST00000420121 DICER1Q9UPY3 1922 aaKnown RBP14.59□□□□□ -0.07
SSBP3-206ENST00000420121 TIAM2Q8IVF5 1701 aa14.59□□□□□ -0.07
SSBP3-206ENST00000420121 TMPOP42166 694 aaKnown RBP14.59□□□□□ -0.07
SSBP3-206ENST00000420121 PRELPP51888 382 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms